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Comment: Comment: How to generate table_annovar from VCF input?
1 day ago by Pierre Lindenbaum 161k
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261
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Comment: Comment: Sam file Header problem
1 day ago by Pierre Lindenbaum 161k
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217
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Comment: Comment: getting exon coordinates
updated 2 days ago by 142k • written 2 days ago by 161k
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379
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Comment: Comment: finding evidence(s) of a peptide translated from an "Upstream Open Reading Frame
2 days ago by Pierre Lindenbaum 161k
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4
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379
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finding evidence(s) of a peptide translated from an "Upstream Open Reading Frame (uORF)"
UTR masspec uORF peptide
updated 2 days ago by 142k • written 2 days ago by 161k
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261
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Comment: Comment: Sam file Header problem
2 days ago by Pierre Lindenbaum 161k
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710
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Comment: Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
2 days ago by Pierre Lindenbaum 161k
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285
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Comment: Comment: Filtering VCF files based on VAF giving incorrect results
3 days ago by Pierre Lindenbaum 161k
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710
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Comment: Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
3 days ago by Pierre Lindenbaum 161k
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207
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Answer: Answer: Genotyping sites with N in reference genome
3 days ago by Pierre Lindenbaum 161k
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241
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Comment: Comment: Sequencing Depth (Read Depth) Calculations
3 days ago by Pierre Lindenbaum 161k
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185
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Comment: Comment: Cannot install bwa-mem2 via conda
updated 2 days ago by 43k • written 3 days ago by 161k
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219
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
3 days ago by Pierre Lindenbaum 161k
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219
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
3 days ago by Pierre Lindenbaum 161k
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219
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
3 days ago by Pierre Lindenbaum 161k
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265
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Comment: Comment: Annotating file using bcftools
3 days ago by Pierre Lindenbaum 161k
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2
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265
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Answer: Answer: Annotating file using bcftools
3 days ago by Pierre Lindenbaum 161k
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708
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Comment: Comment: Filtering Multi-sample VCF file for all except one Genotype
3 days ago by Pierre Lindenbaum 161k
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285
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Answer: Answer: Filtering VCF files based on VAF giving incorrect results
3 days ago by Pierre Lindenbaum 161k
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183
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Comment: Comment: Is it necessary to do genotype quality filteration after snp calling with GATK
4 days ago by Pierre Lindenbaum 161k
1
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0
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183
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Answer: Answer: Duplicated sequence samtools
5 days ago by Pierre Lindenbaum 161k
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426
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Comment: Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
6 days ago by Pierre Lindenbaum 161k
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386
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
6 days ago by Pierre Lindenbaum 161k
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1
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386
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
6 days ago by Pierre Lindenbaum 161k
2
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1
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386
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Answer: Answer: joint callset and vcf sorting, unknown TAG issue
6 days ago by Pierre Lindenbaum 161k
0
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1
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386
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
6 days ago by Pierre Lindenbaum 161k
0
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1
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426
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Comment: Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
7 days ago by Pierre Lindenbaum 161k
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1
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235
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Comment: Comment: java.nio.bufferunderflowexception haplotypecaller error for bqsr reads
7 days ago by Pierre Lindenbaum 161k
2
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234
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Answer: Answer: Failed to open VCF file
7 days ago by Pierre Lindenbaum 161k
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2
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426
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Answer: Answer: Is it Possible to "Merge" data from Replicates within a VCF SNP File
6 days ago by Pierre Lindenbaum 161k
1
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0
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284
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Comment: Comment: what is another word for a BLAST "hit"?
8 days ago by Pierre Lindenbaum 161k
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1
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545
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Comment: Comment: In IGV is this a heterogeneous mutation or false call?
8 days ago by Pierre Lindenbaum 161k
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2
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545
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Comment: Comment: In IGV is this a heterogeneous mutation or false call?
8 days ago by Pierre Lindenbaum 161k
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545
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Answer: Answer: In IGV is this a heterogeneous mutation or false call?
8 days ago by Pierre Lindenbaum 161k
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291
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
8 days ago by Pierre Lindenbaum 161k
0
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1
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291
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
8 days ago by Pierre Lindenbaum 161k
1
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1
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708
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Answer: Answer: Filtering Multi-sample VCF file for all except one Genotype
8 days ago by Pierre Lindenbaum 161k
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1
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462
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Comment: Comment: Different output for read length
9 days ago by Pierre Lindenbaum 161k
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2
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462
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Answer: Answer: Different output for read length
9 days ago by Pierre Lindenbaum 161k
0
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0
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305
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Comment: Comment: bcftools - reducing to "sites-only"?
9 days ago by Pierre Lindenbaum 161k
0
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1
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336
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Comment: Comment: How to convert normalized BigWig file to count matrix?
9 days ago by Pierre Lindenbaum 161k
1
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0
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2.9k
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Comment: Comment: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
9 days ago by Pierre Lindenbaum 161k
0
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0
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234
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Comment: Comment: Nextflow: how to get the process work dir, within the process
9 days ago by Pierre Lindenbaum 161k
3
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1
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2.9k
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Answer: Answer: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
9 days ago by Pierre Lindenbaum 161k
2
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1
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234
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Answer: Answer: Nextflow: how to get the process work dir, within the process
9 days ago by Pierre Lindenbaum 161k
1
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1
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303
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Comment: Comment: Help with Biopython for Beginner
updated 9 days ago by 43k • written 9 days ago by 161k
0
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1
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305
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Answer: Answer: bcftools - reducing to "sites-only"?
9 days ago by Pierre Lindenbaum 161k
0
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1
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708
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Comment: Comment: Filtering Multi-sample VCF file for all except one Genotype
11 days ago by Pierre Lindenbaum 161k
2
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1
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255
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Answer: Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB
12 days ago by Pierre Lindenbaum 161k
1
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1
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773
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Answer: Answer: Create a new bed file with all pairwise combinations between two other bed files
22 days ago by Pierre Lindenbaum 161k
12,471 results • Page 1 of 250
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