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comments
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360
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Comment:
Comment: Best practices in Fungal Genome Assembly
3 days ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
360
views
Comment:
Comment: Best practices in Fungal Genome Assembly
4 days ago by
samuel.a.odonnell
▴ 540
1
vote
1
reply
360
views
Comment:
Comment: Best practices in Fungal Genome Assembly
4 days ago by
samuel.a.odonnell
▴ 540
1
vote
0
replies
360
views
Comment:
Comment: Best practices in Fungal Genome Assembly
4 days ago by
samuel.a.odonnell
▴ 540
1
vote
2
replies
992
views
Comment:
Comment: Removing duplicates
6 weeks ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
992
views
Comment:
Comment: Removing duplicates
6 weeks ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
613
views
Comment:
Comment: Porechop demulitplexing of nanopore sequencing data and barcode bins for each sa
7 months ago by
samuel.a.odonnell
▴ 540
1
vote
0
replies
1.2k
views
Comment:
Comment: Short Read Data Genome Assembly
8 months ago by
samuel.a.odonnell
▴ 540
1
vote
1
reply
1.1k
views
Comment:
Comment: The GATK "The given bam input has no sample names." error
9 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
899
views
Comment:
Comment: investigate the inversions in comparison of assembled genome with reference geno
9 months ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
899
views
Comment:
Comment: investigate the inversions in comparison of assembled genome with reference geno
9 months ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
556
views
Comment:
Comment: Expect heterozygous variant from reads
10 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
915
views
Comment:
Comment: vg: Mapping fewer reads to a genome graph than a linear reference
12 months ago by
samuel.a.odonnell
▴ 540
1
vote
1
reply
1.9k
views
Comment:
Comment: How to rerun Guppy Basecalling (with both fast5_pass and fast5_fail)
13 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
1.1k
views
Comment:
Comment: MissAssembly Correction
15 months ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
1.1k
views
Comment:
Comment: MissAssembly Correction
15 months ago by
samuel.a.odonnell
▴ 540
2
votes
1
reply
1.1k
views
Comment:
Comment: Problem with NextDenovo fungal assembly
16 months ago by
samuel.a.odonnell
▴ 540
1
vote
0
replies
472
views
Comment:
Comment: Tools for annotating predicted genes?
16 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
1.5k
views
Comment:
Comment: minimap2, before or after assembly?
18 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
854
views
Comment:
Comment: Filtering mitochondrion reads from FastQ files
18 months ago by
samuel.a.odonnell
▴ 540
1
vote
0
replies
1.2k
views
Comment:
Comment: How to fix long read from ONT : ERROR: Invalid char while reading fastq.gz file
18 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
1.5k
views
Comment:
Comment: Low basecalling of raw ONT data
19 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
1.0k
views
Comment:
Comment: Assembly size is double the genome size despite specifying --genome-size in flye
19 months ago by
samuel.a.odonnell
▴ 540
2
votes
1
reply
684
views
Comment:
Comment: Why SNPs with read depth > 100 or 200 were removed?
20 months ago by
samuel.a.odonnell
▴ 540
2
votes
0
replies
900
views
Comment:
Comment: Help with geom_dotplot() script
20 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
789
views
Comment:
Comment: How can I make a reference genome from multiple genomes?
20 months ago by
samuel.a.odonnell
▴ 540
1
vote
1
reply
585
views
Comment:
Comment: Unexpected coverage across genome
21 months ago by
samuel.a.odonnell
▴ 540
1
vote
0
replies
860
views
Comment:
Comment: ONT multiplexing not generating equal amount of data for each barcodes
21 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
1.0k
views
Comment:
Comment: Convert fasta to Fastq/bam
21 months ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
948
views
Comment:
Comment: Variant calling for scaffold genome
2.0 years ago by
samuel.a.odonnell
▴ 540
1
vote
1
reply
939
views
Comment:
Comment: A question about SPAdes
2.0 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
1.0k
views
Comment:
Comment: Method to fill N gaps with de novo assembly
2.0 years ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
627
views
Comment:
Comment: comparing and aligning 2 de novo genomes
2.0 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
627
views
Comment:
Comment: comparing and aligning 2 de novo genomes
2.0 years ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
1.1k
views
Comment:
Comment: Incomplete TE identification by repeatmasker
2.0 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
1.1k
views
Comment:
Comment: Incomplete TE identification by repeatmasker
2.1 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
1.1k
views
Comment:
Comment: Incomplete TE identification by repeatmasker
2.1 years ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
618
views
Comment:
Comment: Correct de novo assembly workflow and mapping
2.1 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
732
views
Comment:
Comment: Considering two and more variation in polyploidy
2.1 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
732
views
Comment:
Comment: Considering two and more variation in polyploidy
2.1 years ago by
samuel.a.odonnell
▴ 540
2
votes
1
reply
985
views
Comment:
Comment: Why he/she disabled the base calling in Guppy?
2.1 years ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
1.7k
views
Comment:
Comment: Re-assembly assembled genomes
2.3 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
1.1k
views
Comment:
Comment: How are two alleles typically represented in a whole genome sequence?
2.7 years ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
603
views
Comment:
Comment: Structural variation nomenclature ambiguity
2.7 years ago by
samuel.a.odonnell
▴ 540
0
votes
0
replies
2.0k
views
Comment:
Comment: Beginner problems: Aligning "genomes" that come in contigs
2.7 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
2.0k
views
Comment:
Comment: Beginner problems: Aligning "genomes" that come in contigs
2.7 years ago by
samuel.a.odonnell
▴ 540
1
vote
0
replies
3.6k
views
Comment:
Comment: large number of contigs after assembly
2.7 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
3.6k
views
Comment:
Comment: large number of contigs after assembly
2.7 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
3.6k
views
Comment:
Comment: large number of contigs after assembly
2.7 years ago by
samuel.a.odonnell
▴ 540
0
votes
1
reply
3.6k
views
Comment:
Comment: large number of contigs after assembly
2.7 years ago by
samuel.a.odonnell
▴ 540
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