Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
14k
views
Comment: Comment: How Can We Find The Info For 3'Utr And 5'Utr In Gencode Gtf File?
23 days ago by cmdcolin ★ 3.8k
1
vote
0
replies
531
views
Comment: Comment: Load a full GFF3 into annotation track using arrow (Apollo)
4 weeks ago by cmdcolin ★ 3.8k
1
vote
0
replies
367
views
Comment: Comment: Best genome browser for manual curation of gene structure(s)?
5 weeks ago by cmdcolin ★ 3.8k
3
votes
1
reply
367
views
Answer: Answer: Best genome browser for manual curation of gene structure(s)?
5 weeks ago by cmdcolin ★ 3.8k
0
votes
1
reply
567
views
Answer: Answer: Is it possible to set different tracks to the same scale in JBrowse
5 weeks ago by cmdcolin ★ 3.8k
0
votes
0
replies
650
views
Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
6 weeks ago by cmdcolin ★ 3.8k
0
votes
1
reply
650
views
Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
6 weeks ago by cmdcolin ★ 3.8k
1
vote
1
reply
650
views
Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
6 weeks ago by cmdcolin ★ 3.8k
1
vote
1
reply
650
views
Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
6 weeks ago by cmdcolin ★ 3.8k
1
vote
0
replies
303
views
Comment: Comment: Forgot the web site with comparison of NGS platforms
7 weeks ago by cmdcolin ★ 3.8k
1
vote
1
reply
650
views
Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
7 weeks ago by cmdcolin ★ 3.8k
0
votes
1
reply
316
views
Comment: Comment: comparing VCF files
7 weeks ago by cmdcolin ★ 3.8k
1
vote
1
reply
1.7k
views
Comment: Comment: How to calculate coverage of Nanopore long read data?
10 weeks ago by cmdcolin ★ 3.8k
2
votes
0
replies
298
views
Answer: Answer: gene alignment (microsynteny)
11 weeks ago by cmdcolin ★ 3.8k
0
votes
1
reply
639
views
Answer: Answer: hg38 goldenPath cpgIsland is down?
3 months ago by cmdcolin ★ 3.8k
1
vote
1
reply
270
views
Comment: Comment: How can I view the information in an alternative allele?
3 months ago by cmdcolin ★ 3.8k
2
votes
0
replies
378
views
Answer: Answer: Impossible gene fusion annotations
3 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
634
views
Comment: Comment: How to visualize multiple bacterial genomes with circos?
3 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
453
views
Comment: Comment: Querying nr_clustered database using BLAST REST API?
3 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
453
views
Comment: Comment: Querying nr_clustered database using BLAST REST API?
3 months ago by cmdcolin ★ 3.8k
1
vote
5
replies
453
views
Querying nr_clustered database using BLAST REST API?
blast clustered
updated 3 months ago by 142k • written 3 months ago by ★ 3.8k
0
votes
0
replies
2.9k
views
Comment: Comment: How to get RID from blast rest api url using php
4 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
492
views
Answer: Answer: Bacterial Synteny Tools
4 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
589
views
Comment: Comment: How to draw genome atlas on Linux?
4 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
589
views
Comment: Comment: How to draw genome atlas on Linux?
4 months ago by cmdcolin ★ 3.8k
1
vote
2
replies
589
views
Answer: Answer: How to draw genome atlas on Linux?
4 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
1.0k
views
Comment: Comment: Where can I find a vcf file with individuals in it, that have a specific disease
4 months ago by cmdcolin ★ 3.8k
2
votes
1
reply
1.0k
views
Answer: Answer: Where can I find a vcf file with individuals in it, that have a specific disease
4 months ago by cmdcolin ★ 3.8k
2
votes
1
reply
1.3k
views
Answer: Answer: extract sequence from genome by region
5 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
478
views
Comment: Comment: The Biostar Herald for Tuesday, December 19, 2023
5 months ago by cmdcolin ★ 3.8k
2
votes
0
replies
1.8k
views
Answer: Answer: How to query 1000 genomes project VCF files for specific regions without downloa
5 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
949
views
Comment: Comment: Finding human .vcf files online to download
5 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
715
views
Comment: Comment: Fastest way to convert BED to GTF/GFF with gene_ids?
5 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
13k
views
Answer: Answer: Which program, tool, or strategy do you use to visualize genomic rearrangements?
5 months ago by cmdcolin ★ 3.8k
1
vote
1
reply
949
views
Answer: Answer: Finding human .vcf files online to download
5 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
382
views
Comment: Comment: Annotate Unplaced Scaffold with Chromosome Information
5 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
1.1k
views
Comment: Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when
5 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
599
views
Comment: Comment: How can I map coordinates between two strains of yeast?
5 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
878
views
Comment: Comment: Circular genome browser
5 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
841
views
Comment: Comment: How to overlap patient VCF with ClinVar database annotation using bedtools?
6 months ago by cmdcolin ★ 3.8k
1
vote
1
reply
610
views
Answer: Answer: Finding exons that are always included
6 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
658
views
Comment: Comment: Strand bias in supplementary alignments from Nanopore
6 months ago by cmdcolin ★ 3.8k
1
vote
0
replies
3.3k
views
Answer: Answer: Visualization of maf alignments in JBrowse
6 months ago by cmdcolin ★ 3.8k
3
votes
1
reply
658
views
Comment: Comment: Strand bias in supplementary alignments from Nanopore
6 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
617
views
Answer: Answer: Browser based tool for generating protein alignment figure
6 months ago by cmdcolin ★ 3.8k
1
vote
1
reply
878
views
Comment: Comment: Circular genome browser
6 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
618
views
Comment: Comment: Low coverage, deletion and startloss? What do we see here?
6 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
1.2k
views
Comment: Comment: Map genome positions onto protein coordinates?
6 months ago by cmdcolin ★ 3.8k
0
votes
1
reply
618
views
Comment: Comment: Low coverage, deletion and startloss? What do we see here?
6 months ago by cmdcolin ★ 3.8k
0
votes
0
replies
642
views
Comment: Comment: How to make bam from start pos of read 1 and end pos of read 2 from paired end b
6 months ago by cmdcolin ★ 3.8k
511 results • Page 1 of 11
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6