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3
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Answer: Answer: Best genome browser for manual curation of gene structure(s)?
7 weeks ago by cmdcolin ★ 3.8k
0
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1
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581
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Answer: Answer: Is it possible to set different tracks to the same scale in JBrowse
7 weeks ago by cmdcolin ★ 3.8k
2
votes
0
replies
310
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Answer: Answer: gene alignment (microsynteny)
3 months ago by cmdcolin ★ 3.8k
0
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1
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666
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Answer: Answer: hg38 goldenPath cpgIsland is down?
3 months ago by cmdcolin ★ 3.8k
2
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0
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392
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Answer: Answer: Impossible gene fusion annotations
4 months ago by cmdcolin ★ 3.8k
0
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0
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534
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Answer: Answer: Bacterial Synteny Tools
4 months ago by cmdcolin ★ 3.8k
1
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2
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620
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Answer: Answer: How to draw genome atlas on Linux?
4 months ago by cmdcolin ★ 3.8k
2
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1
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1.1k
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Answer: Answer: Where can I find a vcf file with individuals in it, that have a specific disease
5 months ago by cmdcolin ★ 3.8k
2
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1
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1.3k
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Answer: Answer: extract sequence from genome by region
5 months ago by cmdcolin ★ 3.8k
2
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0
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1.8k
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Answer: Answer: How to query 1000 genomes project VCF files for specific regions without downloa
5 months ago by cmdcolin ★ 3.8k
0
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0
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13k
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Answer: Answer: Which program, tool, or strategy do you use to visualize genomic rearrangements?
6 months ago by cmdcolin ★ 3.8k
1
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1
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1.1k
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Answer: Answer: Finding human .vcf files online to download
6 months ago by cmdcolin ★ 3.8k
1
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1
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627
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Answer: Answer: Finding exons that are always included
6 months ago by cmdcolin ★ 3.8k
1
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0
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3.3k
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Answer: Answer: Visualization of maf alignments in JBrowse
6 months ago by cmdcolin ★ 3.8k
0
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1
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649
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Answer: Answer: Browser based tool for generating protein alignment figure
6 months ago by cmdcolin ★ 3.8k
3
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1
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1.5k
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Answer: Answer: What is the best way to compute genetic distances between FASTQ files?
7 months ago by cmdcolin ★ 3.8k
1
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0
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805
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Answer: Answer: Why is my genome assembly not aligning well?
8 months ago by cmdcolin ★ 3.8k
0
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0
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1.7k
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Answer: Answer: Can BWA (mem) detect longer deletions?
8 months ago by cmdcolin ★ 3.8k
1
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1
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764
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Answer: Answer: GRCh37/38 reference genotype AF wrong ?
8 months ago by cmdcolin ★ 3.8k
2
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1
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794
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Answer: Answer: Recapitulating a GenomeBrowser-style plot
9 months ago by cmdcolin ★ 3.8k
0
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0
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1.3k
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Answer: Answer: Fasta file is not converting properly to Indexed Fasta File
updated 9 months ago by 142k • written 9 months ago by ★ 3.8k
0
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0
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621
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Answer: Answer: Combining Multiple Tracks in JBrowse2
9 months ago by cmdcolin ★ 3.8k
1
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0
replies
6.0k
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Answer: Answer: Coverage plot of a complete genome
9 months ago by cmdcolin ★ 3.8k
1
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0
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10k
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Answer: Answer: Alternatives To Liftover
9 months ago by cmdcolin ★ 3.8k
1
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0
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743
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Answer: Answer: Integration more than one million cell
10 months ago by cmdcolin ★ 3.8k
1
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1
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892
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Answer: Answer: Factors affecting the size of a structural variant
10 months ago by cmdcolin ★ 3.8k
1
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1
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515
views
Answer: Answer: How to Replicate JBrowse Plot
10 months ago by cmdcolin ★ 3.8k
1
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0
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624
views
Answer: Answer: synteny viewer
11 months ago by cmdcolin ★ 3.8k
1
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1
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789
views
Answer: Answer: How to Split 3000 WGS CRAM files into 1Mbp length chunks
12 months ago by cmdcolin ★ 3.8k
2
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1
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966
views
Answer: Answer: interpreting inversions on IGV
12 months ago by cmdcolin ★ 3.8k
0
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0
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920
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Answer: Answer: Fast BAM header editing
12 months ago by cmdcolin ★ 3.8k
0
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2
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813
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Answer: Answer: Haplotype specific alleles
12 months ago by cmdcolin ★ 3.8k
0
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1
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814
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Answer: Answer: Detecting heterozygous deletions in NGS sequence data
13 months ago by cmdcolin ★ 3.8k
3
votes
1
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2.3k
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Answer: Answer: How to perform synteny alignments and plots only with a gene?
14 months ago by cmdcolin ★ 3.8k
0
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1
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1.2k
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Answer: Answer: How to remove homozygous reference genotypes from multi-sample vcf file based on
14 months ago by cmdcolin ★ 3.8k
2
votes
0
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1.1k
views
Answer: Answer: How to create a graph that shows pairwise Fst values at single SNP loci across t
14 months ago by cmdcolin ★ 3.8k
4
votes
1
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1.6k
views
Answer: Answer: Realigning BAM files to new reference
14 months ago by cmdcolin ★ 3.8k
2
votes
1
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2.7k
views
Answer: Answer: Rust bioinformatics projects ideas
15 months ago by cmdcolin ★ 3.8k
0
votes
1
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868
views
Answer: Answer: Alternatives to Lollipop for virus variant data
15 months ago by cmdcolin ★ 3.8k
4
votes
1
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1.1k
views
Answer: Answer: Gviz python alternative
16 months ago by cmdcolin ★ 3.8k
4
votes
1
reply
2.3k
views
Answer: Answer: Mapping a small number of contigs to a reference subsequence
16 months ago by cmdcolin ★ 3.8k
0
votes
1
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786
views
Answer: Answer: Program to View Average Coverage with Variance of BAM/Bigwig Files?
16 months ago by cmdcolin ★ 3.8k
2
votes
1
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908
views
Answer: Answer: JBrowse on GitHub (A question about file size)
16 months ago by cmdcolin ★ 3.8k
0
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0
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5.1k
views
Answer: Answer: How to create a dotplot like this for GSEA analysis from DNA methylation data (C
16 months ago by cmdcolin ★ 3.8k
4
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2
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1.8k
views
Answer: Answer: How to calculate coverage of Nanopore long read data?
11 weeks ago by cmdcolin ★ 3.8k
3
votes
1
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994
views
Answer: Answer: remove CIGAR strings starting with insertion
17 months ago by cmdcolin ★ 3.8k
3
votes
1
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795
views
Answer: Answer: Gene location of both inherited gene
17 months ago by cmdcolin ★ 3.8k
1
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1
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1.5k
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Answer: Answer: How is p-value calculated in MACS2
17 months ago by cmdcolin ★ 3.8k
2
votes
1
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18k
views
Answer: Answer: What's Supplementary Reads?
18 months ago by cmdcolin ★ 3.8k
4
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1
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94k
views
Answer: Answer: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
18 months ago by cmdcolin ★ 3.8k
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