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Comment: Which language use as a beginner in Bioinformatics and Computational genomics
14 months ago by
rpolicastro
13k
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0
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674
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Comment:
Comment: sequencing data from different samples in the Integrative Genome Viewer (IGV)
14 months ago by
rpolicastro
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1.4k
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Comment:
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
14 months ago by
rpolicastro
13k
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1.5k
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Comment:
Comment: Tools or R / Python packages to perfom ML models
14 months ago by
rpolicastro
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2
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1
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1.4k
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Comment:
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
14 months ago by
rpolicastro
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1.0k
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Comment:
Comment: Making multiple box plots with relative abundance in R
14 months ago by
rpolicastro
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1.0k
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Answer:
Answer: Making multiple box plots with relative abundance in R
14 months ago by
rpolicastro
13k
2
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1
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767
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Answer:
Answer: How to create a mutation frequency comparison plot?
14 months ago by
rpolicastro
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2
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0
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921
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Answer:
Answer: How to get unaligned reads and aligned reads into separate files from SAM/BAM?
14 months ago by
rpolicastro
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1.4k
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Comment:
Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when
14 months ago by
rpolicastro
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832
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Comment:
Comment: Extracting list of identical items from several excel files
15 months ago by
rpolicastro
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2.8k
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Comment:
Comment: WGCNA Analysis - blockwiseModules data processing
15 months ago by
rpolicastro
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1
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1.2k
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Answer:
Answer: featureCount Error "No paired-end reads were detected in paired-end read library
15 months ago by
rpolicastro
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848
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Comment:
Comment: How to change "CompressedGRangesList" to "GRangesList"
15 months ago by
rpolicastro
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821
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Comment:
Comment: ComBat-seq problem
15 months ago by
rpolicastro
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0
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800
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Comment:
Comment: STAR GeneCounts for most genes are 0
15 months ago by
rpolicastro
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808
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Comment:
Comment: featureCounts error???
15 months ago by
rpolicastro
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1.1k
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Answer:
Answer: Samtools index not working in Snakemake
15 months ago by
rpolicastro
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1.3k
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Comment:
Comment: duplicates issues when trying to convert long to wide in R
15 months ago by
rpolicastro
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1.3k
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Comment:
Comment: duplicates issues when trying to convert long to wide in R
15 months ago by
rpolicastro
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598
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Comment:
Comment: How to make an amino acid sequence using `AAString ()`?
15 months ago by
rpolicastro
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845
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Comment:
Comment: RNA-Seq data analysis - question
15 months ago by
rpolicastro
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3
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1.6k
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Answer:
Answer: running for loop for resolution of seurat got error: Error: Not an S4 object.
15 months ago by
rpolicastro
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788
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Comment:
Comment: Differential Gene Expression between patients and not groups
15 months ago by
rpolicastro
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0
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1
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1.0k
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Comment:
Comment: R package version
15 months ago by
rpolicastro
13k
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1
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788
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Comment:
Comment: Differential Gene Expression between patients and not groups
15 months ago by
rpolicastro
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1
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1.1k
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Comment:
Comment: Bulk RNAseq Salmon index building which transcriptome to use
15 months ago by
rpolicastro
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0
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1
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986
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Comment:
Comment: all(rownames(cts) %in% txdf$TXNAME) is FALSE in DTU Analysis in R
15 months ago by
rpolicastro
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1.5k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
15 months ago by
rpolicastro
13k
1
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0
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2.2k
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Answer:
Answer: Create Seurat Object from matrix and two text files
15 months ago by
rpolicastro
13k
1
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2
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1.5k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
15 months ago by
rpolicastro
13k
1
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1
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1.5k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
15 months ago by
rpolicastro
13k
0
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1
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2.2k
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Comment:
Comment: Create Seurat Object from matrix and two text files
15 months ago by
rpolicastro
13k
2
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1
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986
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Answer:
Answer: all(rownames(cts) %in% txdf$TXNAME) is FALSE in DTU Analysis in R
15 months ago by
rpolicastro
13k
1
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3
replies
1.5k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
15 months ago by
rpolicastro
13k
1
vote
0
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870
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Comment:
Comment: HT-Seq and count matrix
15 months ago by
rpolicastro
13k
2
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1
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870
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Answer:
Answer: HT-Seq and count matrix
15 months ago by
rpolicastro
13k
0
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1
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2.9k
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Comment:
Comment: Get errors in loading packages/ calling functions in sc-seq data analysis
15 months ago by
rpolicastro
13k
0
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1
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659
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Comment:
Comment: How to find transcription factor in my gene set
15 months ago by
rpolicastro
13k
0
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1
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1.2k
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Comment:
Comment: Need help ASAP
15 months ago by
rpolicastro
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0
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1
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1.4k
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Comment:
Comment: Samtools filtering based on PNEXT
15 months ago by
rpolicastro
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0
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0
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1.2k
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Comment:
Comment: Need help ASAP
15 months ago by
rpolicastro
13k
2
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0
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891
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Answer:
Answer: Printing quality scores from fastq file
15 months ago by
rpolicastro
13k
0
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0
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1.5k
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Comment:
Comment: GSVA Analysis
15 months ago by
rpolicastro
13k
1
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1
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1.1k
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Comment:
Comment: FASTA File Concatenation
15 months ago by
rpolicastro
13k
3
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2
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1.5k
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Answer:
Answer: GSVA Analysis
16 months ago by
rpolicastro
13k
0
votes
1
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1.4k
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Comment:
Comment: Use mutate inside for loop and write the results
16 months ago by
rpolicastro
13k
0
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0
replies
1.0k
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Answer:
Answer: QC cut off for snRNAseq data
16 months ago by
rpolicastro
13k
4
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1
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1.3k
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Answer:
Answer: Unable to install Kmergenie
16 months ago by
rpolicastro
13k
1
vote
1
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1.3k
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Comment:
Comment: Unable to install Kmergenie
16 months ago by
rpolicastro
13k
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