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117,449 results • Page
4 of 2349
Sort: Rank
Rank
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Votes
Replies
0
votes
0
replies
161
views
Value of short kmer lengths with 300PE sequencing
metagenomics
sequencing
spades
microbiome
7 days ago by
Bryan
▴ 10
0
votes
0
replies
159
views
News:
Online course: Reproducibility Data Analysis with R, from 28-31 October
R
Git
Quarto
Reproducibility
Docker
updated 7 days ago by
Ram
44k • written 7 days ago by
carlopecoraro2
★ 2.5k
0
votes
3
replies
241
views
Bcftools consensus unexpected output
Bcftools
updated 7 days ago by
Ram
44k • written 7 days ago by
selplat21
▴ 20
0
votes
8
replies
796
views
Is it Possible to "Merge" data from Replicates within a VCF SNP File
snp
vcf
genomics
plink
updated 7 days ago by
Ram
44k • written 4 weeks ago by
ajbarrett98
• 0
1
vote
3
replies
335
views
Genomic coordinates in the BioNano VCF
bionano
VCF
SMAP
optical_genome_mapping
updated 3 days ago by
cmdcolin
★ 3.8k • written 9 days ago by
avigail.shnaider
• 0
1
vote
3
replies
492
views
Filtering VCF files based on VAF giving incorrect results
GATK
picard
VCF
bcftools
updated 7 days ago by
Pierre Lindenbaum
162k • written 4 weeks ago by
Arton
▴ 10
0
votes
0
replies
139
views
Genetic DIversity Of Macrolide-Resistant Shigella species
comparative-genomics
prokka
updated 8 days ago by
Ram
44k • written 8 days ago by
eduardooseigyimah
• 0
3
votes
2
replies
897
views
Non-symmetric shrinkage with apeglm?
RNA-Seq
DESeq2
apeglm
updated 8 days ago by
Ram
44k • written 3.3 years ago by
Chris-OHRI
▴ 30
0
votes
6
replies
663
views
I am trying to get my head around amplicon sequencing library prep but can't understand how the adapters are attached
library-preparation
illumina
amplicon
updated 8 days ago by
Ram
44k • written 8 days ago by
ScottDansk
▴ 10
0
votes
0
replies
129
views
Paired snATACseq and snRNAseq over multiple tissues - best approaches
Signac
ArchR
Seurat
ATACseq
8 days ago by
matt.a.bennett25890
▴ 30
0
votes
7
replies
445
views
How do I update the gene names of TCGA data correctly?
HGNC
TCGA
updated 3 days ago by
Zhenyu Zhang
★ 1.2k • written 8 days ago by
Ivana
• 0
0
votes
1
reply
192
views
Atac seq Annotation
Atac-seq
Signac
Seurat
updated 8 days ago by
ATpoint
83k • written 8 days ago by
yau
• 0
2
votes
1
reply
187
views
Correct pvalue threshold for a GWAS analysis on mitochondrial variants with PLINK2
mitochondria
gwas
p-value
plink2
updated 8 days ago by
Ram
44k • written 8 days ago by
padrebio
▴ 10
0
votes
0
replies
136
views
MToolBox: cat: test.lst: No such file or directory
MToolBox
updated 8 days ago by
Ram
44k • written 8 days ago by
Stavroula
• 0
0
votes
1
reply
209
views
Query regarding single cell rna seq annotation using marker genes
scRNA-seq
updated 8 days ago by
Ram
44k • written 8 days ago by
sc_analysis
• 0
0
votes
1
reply
649
views
Building a mappability mask with SNPable
SNPable
mappability
samtools
updated 8 days ago by
oviscandensis
• 0 • written 10 months ago by
biostars
▴ 10
4
votes
8
replies
437
views
BAM File Quality Sequences Are "?" and File Size is Very Small After STAR Alignment
Bam
Fastq
Gene-expression
RNA-seq
updated 7 days ago by
Ram
44k • written 8 days ago by
Tommmm
• 0
0
votes
1
reply
162
views
Bismark Methylation calling
Bismark
Methylation
WGBS
updated 7 days ago by
Ram
44k • written 8 days ago by
Keem Uarren Eiryll
• 0
2
votes
4
replies
343
views
Differential gene expression
Differential-gene-expression
7 days ago by
goyal.shiwali
▴ 10
0
votes
0
replies
131
views
Why Does Metalign Relative Abundance Change?
metagenomics
metalign
8 days ago by
echolley
• 0
1
vote
5
replies
345
views
Question about CIBERSORTx Docker to Singularity
CIBERSORTx
docker
singularity
updated 8 days ago by
Ram
44k • written 9 days ago by
jinghuang800
▴ 10
4
votes
0
replies
190
views
Herald:
The Biostar Herald for Wednesday, June 05, 2024
herald
8 days ago by
Biostar
2.9k
1
vote
5
replies
345
views
Failure in inner_join
dplyr
r
updated 8 days ago by
zx8754
11k • written 8 days ago by
egascon
▴ 10
1
vote
2
replies
244
views
Please Help Me Understand GWAS Results
rMVP
GWAS
GAPIT
8 days ago by
chloek88
• 0
1
vote
3
replies
261
views
Could not parse a VCF file when using bcftools annotate
bcftools
updated 8 days ago by
Ram
44k • written 9 days ago by
ManuelDB
▴ 80
0
votes
1
reply
647
views
Changing gap open and extension penalties in muscle (or any other command line tool that works on mac, really)
multiple-sequence-alignment
updated 9 days ago by
erikatatianacs
• 0 • written 12 months ago by
sodiumnitrate
▴ 20
10
votes
8
replies
5.1k
views
Different bigwig file sizes between BedgraphToBigwig and bamCoverage
ucsc
bigwig
BedgraphToBigWig
bamCoverage
deeptools
updated 8 days ago by
QX
▴ 20 • written 5.8 years ago by
m98
▴ 420
0
votes
0
replies
116
views
News:
Course: Seafood Genomics
Seafood
FoodTraceability
Nanopore
Genomics
2 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
127
views
How to pre-process raw microarray data?
limma
microarray
WGCNA
updated 9 days ago by
GenoMax
143k • written 9 days ago by
egascon
▴ 10
1
vote
1
reply
160
views
Mass spectrometry data analysis
Proteome-discoverer
8 days ago by
iqra
• 0
0
votes
2
replies
208
views
Subset Seurat Object based on metadata
Seurat
2 days ago by
Bine
▴ 60
0
votes
1
reply
152
views
Mageck RRA is listing negative controls as high fold change in the gene summary
python
crispr
mageck
updated 8 days ago by
Ram
44k • written 9 days ago by
liz.b
• 0
0
votes
0
replies
115
views
ERROR with PRSKB
prskb
vcf
updated 8 days ago by
Ram
44k • written 9 days ago by
stefania.morelli92
• 0
0
votes
0
replies
114
views
Subunit Annotation in Genome Scale Models
database
engineering
uniprot
metabolic
enzyme
9 days ago by
shafiat.dewan
• 0
0
votes
0
replies
116
views
CIBERSORTx PHP Fatal error
CIBERSORTx
PHP
9 days ago by
JIWON KIM
• 0
0
votes
4
replies
262
views
Estimating haplotypes from sequencing reads
sequencing
reads
haplotypes
8 days ago by
Arline
• 0
0
votes
0
replies
142
views
Salmon low mapping rates
Reference
Mapping
Salmon
RNA-seq
updated 9 days ago by
GenoMax
143k • written 9 days ago by
L.Chang
• 0
2
votes
7
replies
345
views
Ensembl IDs <-> Gene Symbols mapping -- Using org.Hs.eg.db, biomaRt or EnsDb.Hsapiens.v86?
org.hs.eg.db
EnsDb.Hsapiens.v86
biomaRt
ensembl
updated 8 days ago by
tomas4482
▴ 410 • written 9 days ago by
DGTool
▴ 40
0
votes
1
reply
153
views
full lenght gene amplification from RNA seq data
RNAseq
offtopic
updated 9 days ago by
GenoMax
143k • written 9 days ago by
maryum
• 0
1
vote
3
replies
391
views
NCBI gene data
Variants
NCBI
updated 9 days ago by
GenoMax
143k • written 11 weeks ago by
chandrakala.m
• 0
0
votes
1
reply
161
views
Can I downsize ChIP-seq data for ChIP-ed samples
ChIP-seq
downsize
updated 4 days ago by
rfran010
▴ 950 • written 9 days ago by
Insect_gmx
• 0
10
votes
5
replies
9.6k
views
What Is The Meaning Of Snp Strand
snp
mapping
strand
updated 9 days ago by
Ömer An
▴ 260 • written 12.8 years ago by
Jonathan Hsu
▴ 60
0
votes
0
replies
236
views
I need to binary plink files of human genome reference build37, however, Im completely lost and have no idea from where to begin
bplinkfiles
human
genome
plink
updated 9 days ago by
GenoMax
143k • written 9 days ago by
Marcos
• 0
0
votes
0
replies
117
views
MrBayes 3.2.7a in mpi mode staying at stationary state from the beginning
mpi
mrbayes
stationary
beagle
library
9 days ago by
ricfoz
▴ 100
1
vote
14
replies
604
views
Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
deseq
updated 8 days ago by
i.sudbery
19k • written 9 days ago by
Alexander
▴ 220
0
votes
3
replies
258
views
Transcriptome analysis of virus infected plants and their controls
DEG
heatmap
rna
updated 9 days ago by
manaswwm
▴ 510 • written 9 days ago by
diya
• 0
1
vote
2
replies
248
views
Monocle3 Download error in R
Rstudio
Monocle3
updated 9 days ago by
GenoMax
143k • written 10 days ago by
odi
▴ 10
0
votes
3
replies
213
views
[bwa_idx_build] fail to open file 'bwtsw' : No such file or directory
bwa
updated 9 days ago by
GenoMax
143k • written 9 days ago by
efan18808
• 0
0
votes
0
replies
132
views
wilcoxon signed rank test
anova
R
mixed-model
fixed-effect
random-effect
updated 9 days ago by
Ram
44k • written 9 days ago by
Andy
• 0
0
votes
2
replies
227
views
How to download multiple fasta sequences and keep them organized by what genome they came from
Blast
Sequences
9 days ago by
ATS
• 0
117,449 results • Page
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