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Job: Bioinformatics Analyst - Laboratory Medicine and Pathology
job
just now by toddknutson ▴ 60
0
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46
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Job: Post-doctoral Position in Alzheimer’s Disease Genetics, ‘Omics, and Biomarkers
Genomics Alzheimer multiomics neuroimaging
5 hours ago by belloy • 0
0
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1
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371
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Job: Seeking Bioinformatics/Drug Design Opportunities - PhD in Pharmacology with Experience in RNA-seq, CADD & Deep Learning Molecular Generation
search job
updated 1 day ago by 142k • written 1 day ago by • 0
0
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0
replies
141
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Job: Postdoctoral Position in Bioinformatics - Mainz, Germany
NGS Genomics Post-doc R-loops
updated 4 days ago by 43k • written 4 days ago by • 0
1
vote
0
replies
218
views
Job: CTO/founding engineer role at Voyant Bio
engineer
11 days ago by Assaf ▴ 10
0
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0
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160
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Job: Ensembl Plants Senior Bioinformatician
ebi embl genomics ensembl
14 days ago by Ben_Ensembl ★ 2.4k
0
votes
0
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268
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Job: Consultant to update a Snakemake workflow with the new Kubernetes executor plugin for Snakemake 8
Kubernetes DevOps executor AWS Snakemake
updated 19 days ago by 54k • written 19 days ago by ▴ 100
0
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0
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216
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Job: Ensembl Outreach Project Leader
ebi embl genomics ensembl
14 days ago by Ben_Ensembl ★ 2.4k
0
votes
0
replies
218
views
Job: Bioinformatics PhD position in Aarhus, Denmark
PhD Genomics Cancer
updated 25 days ago by 43k • written 27 days ago by • 0
0
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0
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304
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Job: PhD in bioinformatics / computational biology
NGS Omics Evolution Aging
28 days ago by Arne.Sahm • 0
0
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1
reply
2.4k
views
Job: Full Stack Web Developer - Cambridge, UK
JavaScript Python Visualisation
written 8.4 years ago by ▴ 400
2
votes
1
reply
654
views
Job: Exciting 2024 Summer Internship Opportunity in Translational Genetics Arrowhead Pharmaceuticals!
intern
4 weeks ago by Shicheng Guo ★ 9.4k
1
vote
0
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185
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Job: Job Opening - Fred Hutch - Director of Training & Community
fred-hutchinson
updated 5 weeks ago by 43k • written 6 weeks ago by ▴ 20
0
votes
0
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240
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Job: Post-doctoral positions in computational biomedicine
data-science biomedicine machine-learning
updated 6 weeks ago by 43k • written 6 weeks ago by ▴ 200
0
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0
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269
views
Job: Project Scientist in Neurobiology at UC San Diego
UCSD Biology LifeScience HigherEducation
7 weeks ago by lta ▴ 10
0
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0
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261
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Job: Bioinformatics/Data Science postdoc position in Aarhus, Denmark
data-science genomics postdoc
updated 4 weeks ago by 43k • written 7 weeks ago by • 0
0
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0
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296
views
Job: Bioinformatics Assistant Researcher - Metabarcoding - Honolulu, Hawaii
DNA postdoc eDNA environmental metabarcoding
7 weeks ago by Jonathan • 0
0
votes
0
replies
181
views
Job: Bioanalysis Neuroimaging position
python machine-learning Neuroscience
updated 7 weeks ago by 43k • written 7 weeks ago by • 0
0
votes
0
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395
views
Job: Data scientist/Bioinformatician University of Wisconsin Biotechnology Center Bioinformatics Resource Center
data-scientist
updated 7 weeks ago by 43k • written 8 weeks ago by ★ 1.8k
0
votes
0
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195
views
Job: Postdoctoral research position at the Barts Cancer Institute - Queen Mary University London
cancer epigenomics transposable-elements
updated 8 weeks ago by 43k • written 8 weeks ago by ▴ 230
0
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0
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439
views
Job: Assistant professor in Computational biology with a focus on machine learning for multimodal molecular biology data
Multiomics Machine-Learning
8 weeks ago by lukas.kall ▴ 40
1
vote
2
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577
views
Job: Junior Research Software Engineer/ Research Software Engineer - web resources for virology
software developer web virology
6 weeks ago by Joseph Hughes ★ 3.0k
0
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0
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290
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Job: PhD offer metabarcoding plant insect interaction in agricultural fields in Germany
Metabarcoding enthomology botany
9 weeks ago by b.gemeinholzer • 0
0
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0
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358
views
Job: Postdoctoral Fellow / Staff Scientist - Genomic Data Modeling Lab
genomics machine-learning Seattle
updated 9 weeks ago by 43k • written 10 weeks ago by • 0
3
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1
reply
448
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Job: AN INTEGRATED IN SILICO AND IN VITRO STUDY ON THE DEVELOPMENT OF A COMPUTATIONAL METHOD FOR THE PREDICTION OF O-GLCNAC MODIFIED PROTEINS
proteomics
updated 10 weeks ago by 43k • written 10 weeks ago by • 0
1
vote
3
replies
611
views
Job: 1 Bioinformatician position in San Sebastian (Spain)
postdoc phd proteomics scRNAseq transcriptomics
10 weeks ago by ev97 ▴ 20
0
votes
1
reply
334
views
Job: FT Tenured Faculty Position at Washington University School of Medicine in St. Louis
Neurogenomics Fulltime Missouri Tenured Faculty
updated 11 weeks ago by 43k • written 11 weeks ago by • 0
0
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0
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496
views
Job: PhD fellowship in bioinformatic analysis of host - pathogen interactions in the context of anti-microbial resistance in pigs
non-coding-RNA
updated 11 weeks ago by 43k • written 11 weeks ago by ▴ 80
0
votes
0
replies
299
views
Job: Project Scientist in Molecular Biology at UC San Diego
UCSD Biology LifeScience HigherEducation
12 weeks ago by lta ▴ 10
1
vote
3
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645
views
Job: Looking for bioinformatics help
genomics
updated 11 weeks ago by 43k • written 12 weeks ago by ▴ 120
1
vote
0
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284
views
Job: Postdoctoral researcher in computational (epi)genomics (Maastricht, The Netherlands)
Long-read-Sequencing Postdoc Homo-Sapiens Repetitive-Elements Epigenetics
updated 12 weeks ago by 43k • written 12 weeks ago by ▴ 10
0
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0
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1.1k
views
Job: Job Vacancy Announcement - Health Scientist Administrator (Program Officer) - Genomics Research Branch (GRB)(Branch Chief: Jonathan Pevsner)
Genetics Program-Officer Genomics
updated 12 weeks ago by 43k • written 12 weeks ago by • 0
0
votes
1
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343
views
Job: How to calculate hub genes in Cytoscape from a WGCNA output?
Cytoscape WGCNA network-analysis
updated 12 weeks ago by 43k • written 12 weeks ago by ▴ 50
2
votes
1
reply
5.3k
views
Job: Staff Scientists Positions: System Architect And Bioinformatics Engineer, Massachusetts General Hospital, Boston,
sysadmin computational-biologist
written 11.0 years ago by ▴ 70
0
votes
0
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469
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Job: Computational biologist / Bioinformatician (m/f/d) / (PhD), University of Oldenburg, Germany
Medical-Genetics Research-Position PhD
updated 3 months ago by 43k • written 3 months ago by • 0
0
votes
0
replies
296
views
Job: Job Vacancy Announcement - Health Scientist Administrator (Program Officer) - Translational Genomics for Mental Health (TGMH)
Program-Officer Translational-Genomics
updated 3 months ago by 43k • written 3 months ago by • 0
1
vote
0
replies
361
views
Job: Researcher/Postdoc to enhance computational resources for regulatory genomics with deep learning
deep-learning
updated 3 months ago by 43k • written 3 months ago by ▴ 910
2
votes
3
replies
716
views
Job: Bio-informatics Scientist at BASF | Nunhems (Near Eindhoven, The Netherlands)
BASF
3 months ago by WS_jobs • 0
0
votes
1
reply
407
views
Job: Senior Bioinformatician position open at the University of Alabama at Birmingham
hiring singlecell spatial transcriptomics
updated 3 months ago by 43k • written 3 months ago by ▴ 20
0
votes
0
replies
364
views
Job: Postdoc for computational biology on cancer omics data analysis at Liang lab of Wistar Institute, Philadelphia, US
Omics Postdoc computational
4 months ago by omicsresearch • 0
0
votes
1
reply
487
views
Job: PhD fellowship in bioinformatic analysis of host - pathogen interactions in the context of anti-microbial resistance in pigs
PhD fellowship anti-microbial-resistance
updated 4 months ago by 43k • written 4 months ago by ▴ 80
0
votes
0
replies
464
views
Job: PhD position at CiMUS (Santiago de Compostela, Spain)
transcriptomics PhD RNA-seq Single-Cell
updated 4 months ago by 43k • written 4 months ago by ▴ 20
0
votes
0
replies
334
views
Job: Postdocs in Anaerobic Microbial Consortia – DTU Chemical Engineering
Microbiology microbiology Biochemistry Anaerobic
5 months ago by info ▴ 80
0
votes
0
replies
620
views
Job: Postdoc in comparative genomics of plant-associated bacteria (Polytechnic University of Madrid, SPAIN)
evolution genomics mutation bacteria genomes
5 months ago by Alejandro • 0
0
votes
0
replies
400
views
Job: Assistant Professor: Molecular Biology
Biology Molecular UCSD
5 months ago by lta ▴ 10
0
votes
0
replies
556
views
Job: Bioinformatican/Data Scientist, Transplant Immunology/Genetics, Medical University of Vienna, Austria
RiskPrediction NGS SNP ExomeSequencing GeneticRiskScore
5 months ago by aheinzel ▴ 130
1
vote
0
replies
519
views
Job: Fully funded PhD positions, Vienna, Austria
fully-funded phd
updated 5 months ago by 6.4k • written 5 months ago by ▴ 10
0
votes
0
replies
359
views
Job: PhD researcher in Systems Toxicology: connecting co-expression networks to injury and pathology. Leiden NL
WGCNA toxicology systems-biology gene-network
updated 5 months ago by 6.4k • written 5 months ago by • 0
0
votes
0
replies
495
views
Job: PostDoc or PhD researcher: Bioinformatician in Systems Toxicology for Chemical Safety Assessment. Leiden, the Netherlands.
WGCNA toxicology systems-biology gene-network
updated 5 months ago by 6.4k • written 5 months ago by • 0
0
votes
0
replies
426
views
Job: Assistant Teaching Professor in Biological Sciences, Univ of California San Diego, La Jolla, CA
LifeScience HigherEducation Biology UCSD
updated 5 months ago by 142k • written 5 months ago by ▴ 10
1,000 results • Page 1 of 20
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Comment: Which hg38 file?
Answer: Which hg38 file?
Answer: Where to get the following bed file?
How to save GRanges object to csv file
Answer: How to get proteins from GFF file resulted from MAKER annotation
Answer: Gene ontology and homologs
Comment: anRichment is missing
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Recent Replies
Comment: Understanding STAR output (Aligned.out.sam file) by GenoMax 142k
Refer to SAM alignment format: https://samtools.github.io/hts-specs/SAMv1.pdf Check section 1.4.
Answer: Seeking Guidance on Identifying Mutations in DARs from ATAC Data in Cancer Genom by LChart 3.9k
Step 1: Go to TCGA in the GDC and open the Cohort Builder https://portal.gdc.cancer.gov/analysis_page?app=CohortBuilder&tab=general Step …
Comment: Where to get the following bed file? by GenoMax 142k
SeqCap kits are discontinued. If you don't find the said file your will need to email Roche Support per this page: https://sequencing.roche…
Answer: Where to get the following bed file? by LChart 3.9k
UCSC maintains a list of exome probe sets and targets. You could check there: https://hgdownload.soe.ucsc.edu/gbdb/hg19/exomeProbesets/
Comment: How to compute TPM normalized values for TCGA miRNA data? by Ngrin • 0
Yes, I found some similar ideas on biostar repository. So you think the authors have done something wrong? And I should only consider CPM?
Comment: Spike-in control found in raw reads (16S amplicon seq) but not picked up by DADA by Chris Dean ▴ 390
It is difficult to answer how they were able to identify *S. hominis* without seeing the code or paper. To address your second question, i…
Comment: Problem with Seurat package in PercentageFeatureSet function by bk11 ★ 2.4k
Did you check where the `features.tsv.gz` file had Gene IDs or Ensembl IDs?
Answer: How to compute TPM normalized values for TCGA miRNA data? by dsull ★ 6.0k
TPM is irrelevant for miRNA-seq; CPM works fine. TPM tries to adjust for length effects by dividing by gene length (e.g. reducing the im…
Comment: Applying the metacell2 algorithm using python by Wayne ★ 2.0k
"I'm also unsure what qualifies as a lateral gene." The [README where you reference](https://metacells.readthedocs.io/en/latest/readme.htm…
Comment: Spike-in control found in raw reads (16S amplicon seq) but not picked up by DADA by sovrappensiero ▴ 90
Ah, yes this makes sense! I knew this was an issue with, say, using kraken2 on shotgun metagenomic reads, but I don't have a lot of experi…
Comment: How to access TCGA samples that were treated with a specific drug? by Qroid ▴ 40
Thank you. Maybe it's best to confirm with the authors about how they're getting responder/non-responder labels. I'll do that now.
Comment: Spike-in control found in raw reads (16S amplicon seq) but not picked up by DADA by Chris Dean ▴ 390
If you sequenced a short hypervariable region, most of your sequence reads will not be able to be assigned to the species level. One possi…
Comment: anRichment is missing by GenoMax 142k
Consider emailing Dr. Horvath about this. Until enough people make him aware of this issue WGCNA "problem" is unlikely to get fixed.
Comment: anRichment is missing by Tatyana • 0
Unfortunately, there are only tutorials and codes for tutorials for WGCNA, not installation files for any their packages... :(
Comment: anRichment is missing by GenoMax 142k
See this link for the WGCNA documentation and code from Peter Langfelder : https://bioinformatics.stackexchange.com/questions/21885/where-t…
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