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News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 3 months ago by 2.7k • written 7.4 years ago by 100k
0
votes
0
replies
40
views
News: We created a Bioinformatics Competition for Spatial Transcriptomics: MICOS-EU
cell-clustering Spatial-transcriptomics
updated 2 hours ago by 43k • written 4 hours ago by • 0
0
votes
0
replies
71
views
News: Online course: Bioinformatic analysis of transposable elements
GenomeAssembly Transcriptomics TransposableElements ManualCuration
1 day ago by carlopecoraro2 ★ 2.5k
1
vote
2
replies
1.1k
views
News: The GDC Legacy Archive is retiring soon.
genomic-data-commons tcga gdc
1 day ago by Zhenyu Zhang ★ 1.2k
0
votes
0
replies
135
views
News: Cellosaurus release 49 is available
cell biocuration line database news knowledgebase
3 days ago by Amos Bairoch ▴ 120
0
votes
0
replies
105
views
News: Beyond beginner R: Advancing your coding skills - September 16-19
Advanced-Coding Programming R
updated 3 days ago by 43k • written 4 days ago by ★ 2.5k
0
votes
0
replies
164
views
News: Goodbye, Slow Code? How BioNumpy can Redefine Python’s Role in Bioinformatics!
BioNumPy Python NumPy
updated 6 days ago by 43k • written 6 days ago by • 0
0
votes
0
replies
129
views
News: Online course: Meta-analysis in R - last 2 seats left
Meta-Analysis Statistics R
updated 6 days ago by 43k • written 6 days ago by ★ 2.5k
0
votes
1
reply
289
views
News: FINAL CALL: 8th Berlin Summer School in NGS Data Analysis - Only a few last places available
DNA-seq variant-calling RNA-seq illumina transcriptomics
6 days ago by David Langenberger 11k
0
votes
0
replies
115
views
News: Online course: Genome Annotation
Genome-Assembly Genome-Annotation
7 days ago by carlopecoraro2 ★ 2.5k
3
votes
0
replies
214
views
News: Webinar “Learning Single-cell Atlases” with Dr. Fabian Theis, author of Scanpy on May 8
Scanpy Generative-AI scRNA Machine-Learning
updated 9 days ago by 43k • written 10 days ago by ▴ 60
0
votes
0
replies
171
views
News: Master Meta-analysis with R (May 13-16) - Online!
Meta-Analysis Statistics R
updated 10 days ago by 43k • written 10 days ago by ★ 2.5k
0
votes
0
replies
130
views
News: hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models GLM R
updated 11 days ago by 43k • written 12 days ago by ★ 2.5k
3
votes
0
replies
138
views
News: Interested in Spatial Omics?
Bioconductor Spatial-Omics Spatial-Transcriptomics
updated 12 days ago by 43k • written 12 days ago by ★ 2.5k
0
votes
0
replies
99
views
News: Online course: DNA methylation
Pacbio Nanopore DnaMethylation Evolution
14 days ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
145
views
News: upcoming online statistical courses
Statistics R Data-Analysis
updated 14 days ago by 43k • written 15 days ago by ★ 2.5k
0
votes
0
replies
211
views
News: Online course: Meta-analysis in R
Meta-Analysis Statistics R
updated 18 days ago by 43k • written 18 days ago by ★ 2.5k
0
votes
0
replies
192
views
News: Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo Individual-Based-Models Agent-Based-Models
updated 18 days ago by 43k • written 18 days ago by ★ 2.5k
0
votes
0
replies
191
views
News: Final Call - Bioinformatics Pipeline Development with Nextflow (May 27-29, 2024)
workshop RNA-seq nextflow DNA-seq
updated 19 days ago by 43k • written 20 days ago by 11k
0
votes
0
replies
157
views
News: Deadline Approaching: PETs for Public Health Challenge
privacy public-health-challenge
updated 20 days ago by 43k • written 20 days ago by ▴ 380
0
votes
0
replies
191
views
News: Online course: Network Analysis in R
NetworkAnalyis R
22 days ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
195
views
News: Online course: Meta-analysis in R
Meta-Analysis R
updated 24 days ago by 43k • written 24 days ago by ★ 2.5k
1
vote
0
replies
140
views
News: Online Live Course: Introduction to Machine Learning in R
Rstats TScourses Rlang Rproject
updated 24 days ago by 43k • written 25 days ago by ▴ 70
2
votes
0
replies
135
views
News: Online Course Generalised Additive Mixed Models (GAMM): modelling space-time correlation structures
GAMM Rlang Rstats Rproject
updated 24 days ago by 43k • written 25 days ago by ▴ 70
2
votes
0
replies
134
views
News: Online Course Introduction to Network Analysis and Modelling
Python Network-Analysis
updated 24 days ago by 43k • written 25 days ago by ▴ 70
2
votes
0
replies
123
views
News: Course Functional Programming with R
Rstats TScourses Rproject KeepLearning Rlang
26 days ago by Transmitting Science communication ▴ 70
12
votes
2
replies
480
views
News: 8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop RNA-Seq DNA-Seq Illumina
26 days ago by David Langenberger 11k
2
votes
0
replies
131
views
News: Online course: Genome Annotation
Genome-Assembly RNA-seq Genome-Annotation
updated 26 days ago by 43k • written 26 days ago by ★ 2.5k
0
votes
0
replies
131
views
News: Online course: Multivariate Data Analysis with R and vegan
Multivariate-Statistics vegan R
updated 27 days ago by 43k • written 28 days ago by ★ 2.5k
1
vote
0
replies
188
views
News: Landscape Genomics course in Switzerland
LFMM Landscape-Genomics Sambada R Local-Adaptation
4 days ago by carlopecoraro2 ★ 2.5k
8
votes
2
replies
816
views
News: FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell sequencing
4 weeks ago by David Langenberger 11k
0
votes
0
replies
158
views
News: Online course: Food Traceability Using Genomic Tools
Nanopore Genomic-Tools Illumina Food-Traceability
updated 4 weeks ago by 43k • written 4 weeks ago by ★ 2.5k
0
votes
0
replies
158
views
News: Online course: Eukaryotic Metabarcoding
Metabarcoding Biodiversity R eDNA
4 weeks ago by carlopecoraro2 ★ 2.5k
3
votes
2
replies
611
views
News: Announcement: Research Topic "Mechanistic, Machine Learning and Hybrid Models of the 'Other' Endocrine Regulatory Systems in Health and Disease", Vol…
mathematical-modelling endocrinology ML systems-biology machine-learning
5 weeks ago by Johannes W. Dietrich • 0
0
votes
0
replies
220
views
News: Online course: Reproducibility in Bioinformatics
Singularity Version-Control Docker Containers
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
0
votes
0
replies
182
views
News: Online course: Analysis of Prokaryotic Pangenomes (Last call)
Prokaryotic Bacterial-Genomics Pangenomics
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
0
votes
0
replies
176
views
News: Online course: Introduction to GWAS
GWAS Imputation StatisticalPower
6 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
171
views
News: Online course: Adaptation Genomics
StructuralVariants Selection AdaptationGenomics PopulationStructure
6 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
162
views
News: Online course: Analysis of Prokaryotic Pangenomes
BacterialGenomics Pangenomics
6 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
240
views
News: Online course on Genome Assembly and Annotation (1 seat left)
Galaxy GenomeAssembly GenomeAnnotation
7 weeks ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
179
views
News: NCBI's ClinVar now accepting somatic variation data
variation NCBI somatic-variants ClinVar
7 weeks ago by PeterC_NCBI ▴ 410
1
vote
1
reply
282
views
News: EMBL Course Hands-on course for sample preparation and data analysis in proteomics
EMBLProteomics
updated 7 weeks ago by • 0 • written 12 weeks ago by ▴ 10
1
vote
0
replies
208
views
News: Learn how to create robust bioinformatics pipelines for reproducible and comparable NGS analyses
nextflow pipeline workshop
7 weeks ago by David Langenberger 11k
0
votes
0
replies
162
views
News: Online course: Genome Assembly and Annotation - 3 seats left
Genome-Assembly Galaxy Genome-Annotation
updated 7 weeks ago by 43k • written 8 weeks ago by ★ 2.5k
0
votes
0
replies
164
views
News: Call for abstract: Quest for Orthologs meeting in Montreal
conference phylogeny comparativegenomics orthology evolution
8 weeks ago by sina.majidian ▴ 20
1
vote
0
replies
166
views
News: shournal: A Tool for Bioinformaticians to Boost Research Reproducibility
reproducability terminal bash
8 weeks ago by David Langenberger 11k
1
vote
1
reply
211
views
News: Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser IGB
updated 8 weeks ago by 43k • written 8 weeks ago by • 0
0
votes
0
replies
199
views
News: Online course: Network Analysis in Systems Biology with R/Bioconductor
R RNA-seq Network-Analysis Bioconductor Systems-Biology
updated 8 weeks ago by 43k • written 9 weeks ago by ★ 2.5k
0
votes
0
replies
230
views
News: The 2024 Canadian Bioinformatics Workshops are here!
CBW workshop training
9 weeks ago by bioinformatics.ca • 0
0
votes
0
replies
184
views
News: Live online course Data Manipulation with R Tidyverse, 3 and 5 of April
R manipulation tidyverse data
9 weeks ago by Sole • 0
1,000 results • Page 1 of 20
Recent Votes
A: Meme-Tools: Bit score
Meme-Tools: Bit score
Meme-Tools: Bit score
Comment: error in R code
DEXSeq multiple time points
How to find the most frequent alternative-splicing event from DEXSEQ data?
Comment: Design matrix Differential expression analysis
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Recent Replies
Comment: Quetion regarding WGCNA by deepak180001 • 0
Thank you for your reply andres.firrincieli. I have attached the PCA plot of the expression data used in the WGCNA. ![enter imag…
Comment: Design matrix Differential expression analysis by SHN ▴ 40
Got it, thank you for your response. SN
Comment: How to interpret DEXseq results in therms of significance by Sara ▴ 30
Hi, I used write.table(as.data.frame(DEXSeqResults(MyObj)), "Results.tsv", quote=FALSE, sep="\t", dec=".") to save the result but I recei…
Comment: Tissue-specific DEG analysis with DEseq2 by M. ▴ 30
Can I ask what do you exactly mean by same experiment? If you are talking about the same donor and the same procedure, unfortunately, not a…
Comment: install package: package ‘gmwm’ is not available for this version of R by Ram 43k
Find someone with computer skills near you and consult them. From your posts on the forum, it's clear that you need help at a level that we…
Comment: Gene Specific coverage from WGS data by GenoMax 142k
This is not going to work no matter what program you use since the chromosome identifiers in your GTF (`MN908947.3 `) do not match your BA…
Comment: install.packages("imudata") - package ‘imudata’ is not available for this versio by Ram 43k
Read the answers in the post, understand them and try to implement them.
Comment: High Malat-1 expression in single cell data by t.montserrat.ayuso ▴ 10
Just using the normalized expression of Malat1 works.
Comment: Can I merge Hi-C fastq files from different lanes? by Winter • 0
Awesome, thank you for the concise and straight-forward answer!
Comment: error in R code by ATpoint 82k
Look, before you keep posting these sorts of questions and might gross of users, please read and follow https://www.biostars.org/p/357878/ …
Comment: Gene Specific coverage from WGS data by 1769mkc ★ 1.2k
"Also if is there any other quick way to find gene specific coverage" can you give some example so that its bit more clear what do you mean…
Answer: Tissue-specific DEG analysis with DEseq2 by ATpoint 82k
I assume that all data are from the same experiment, without batch effects and can thus be quantitiatively compared: Many ways to do thi…
Comment: install.packages("imudata") - package ‘imudata’ is not available for this versio by snajafy • 0
I am facing the same problem and I don't know how to solve the problem,....
Comment: install.packages("imudata") by zx8754 11k
[How should I deal with "package 'xxx' is not available (for R version x.y.z)" warning?](https://stackoverflow.com/q/25721884/680068)
Answer: install.packages("imudata") by ATpoint 82k
Welcome to this community. Please learn the most important lesson right away which is reading answers and learning from it. Users gave you …
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