Estimate gene flow between two populations?

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9.2 years ago

a1ultima ▴ 850

Imagine there are two populations X and Y, and for each population you have the genotypes of each individual in that population (e.g. Aa, AA, aa, etc.), but for multiple loci (e.g. AABb).

How could one calculate the gene flow between population X and population Y?

An answer would ideally recommend either or:

An R/Python/C++ library, or any other software tool
the breakdown of the maths I would be much obliged.

References

Indirect measures of gene flow and migration: FST≠14Nm+1

population-genetics genetics gene-flow fst • 2.9k views

ADD COMMENT • link updated 2.1 years ago by Ram 44k • written 9.2 years ago by a1ultima ▴ 850

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What did you try already ?

ADD REPLY • link 9.2 years ago by Nicolas Rosewick 11k

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Read: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1205159/

ADD REPLY • link updated 2.1 years ago by Ram 44k • written 9.2 years ago by Zev.Kronenberg 12k

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