Ucsc Genome Browser Table For Gene Symbol To Coordinate Map?
1
0
Entering edit mode
11.4 years ago

When I visit the UCSC Genome Browser, click on the browser link and type in, for instance, HBB to pull up human beta hemoglobin, what are the underlying tables that store the mapping of such symbols to genomic coordinates?

ucsc map gene coordinates • 3.6k views
ADD COMMENT
1
Entering edit mode
11.4 years ago

I use:

kgXref.geneSymbol and knownGene.chrom/txStart/txEnd

with

hg19.knowGene.name=hg19.kgXref.kgID
ADD COMMENT

Login before adding your answer.

Traffic: 1703 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6