Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
1
vote
1
reply
417
views
Problem with Mirdeep2 and Randfold output
mirdeep2
Randfold
4 weeks ago by
otieno43
▴ 30
1
vote
0
replies
417
views
Answer:
Answer: Problem with Mirdeep2 and Randfold output
4 weeks ago by
otieno43
▴ 30
0
votes
0
replies
512
views
Comment:
Comment: UMI_extract for paired end reads of micro_RNA
9 weeks ago by
otieno43
▴ 30
1
vote
5
replies
512
views
UMI_extract for paired end reads of micro_RNA
UMI-tools
UMI
miRNA
updated 9 weeks ago by
ATpoint
82k • written 10 weeks ago by
otieno43
▴ 30
0
votes
1
reply
512
views
Comment:
Comment: UMI_extract for paired end reads of micro_RNA
10 weeks ago by
otieno43
▴ 30
0
votes
1
reply
277
views
How to use topGO tool for enrichment analysis of non-model organisms
topGO
updated 3 months ago by
dthorbur
★ 2.0k • written 3 months ago by
otieno43
▴ 30
0
votes
0
replies
254
views
Problem with mirdeep2: The mapped reference id from refdb.arf is not an id of the genome fasta file
mirdeep2
updated 4 months ago by
Ram
44k • written 4 months ago by
otieno43
▴ 30
0
votes
3
replies
587
views
Extracting list of identical items from several excel files
from
excel
items
Extract
file
updated 5 months ago by
DonPhager
• 0 • written 5 months ago by
otieno43
▴ 30
0
votes
0
replies
271
views
How to deal with mirdeep2 output "miRBase miRNAs not detected by miRDeep2"
miRNAs
miRBase
6 months ago by
otieno43
▴ 30
0
votes
0
replies
615
views
Comment:
Comment: How to use awk and grep -v option to exclude several patterns from several lines
6 months ago by
otieno43
▴ 30
2
votes
2
replies
615
views
How to use awk and grep -v option to exclude several patterns from several lines
AWK
GREP
updated 6 months ago by
zx8754
11k • written 6 months ago by
otieno43
▴ 30
0
votes
1
reply
1.1k
views
Comment:
Comment: Alignment of mirna on specific organism data from mirbase
7 months ago by
otieno43
▴ 30
0
votes
9
replies
1.1k
views
Alignment of mirna on specific organism data from mirbase
mirbase
miRNA
updated 7 months ago by
Pierre Lindenbaum
161k • written 7 months ago by
otieno43
▴ 30
0
votes
1
reply
497
views
How to obtain unmapped reads from the paired end samples using hisat2
fastq
hisat2
updated 14 months ago by
Ram
44k • written 16 months ago by
otieno43
▴ 30
0
votes
1
reply
709
views
Minimum number of UMI counts/cell
scRNAseq
updated 16 months ago by
ATpoint
82k • written 16 months ago by
otieno43
▴ 30
0
votes
0
replies
1.6k
views
Comment:
Comment: How to obtain a data frame from "SeuratObject".
16 months ago by
otieno43
▴ 30
0
votes
2
replies
1.6k
views
How to obtain a data frame from "SeuratObject".
Count
matrix
16 months ago by
otieno43
▴ 30
0
votes
0
replies
1.1k
views
Comment:
Comment: STAR alignment and HTseq-count
17 months ago by
otieno43
▴ 30
0
votes
2
replies
1.1k
views
STAR alignment and HTseq-count
and
alignment
HTseq-count
STAR
17 months ago by
otieno43
▴ 30
0
votes
1
reply
1.9k
views
Comment:
Comment: How to use RSEM to quantify genes and transcript expression from STAR outpute fi
21 months ago by
otieno43
▴ 30
0
votes
1
reply
1.9k
views
Comment:
Comment: How to use RSEM to quantify genes and transcript expression from STAR outpute fi
updated 21 months ago by
Ram
44k • written 21 months ago by
otieno43
▴ 30
1
vote
4
replies
1.9k
views
How to use RSEM to quantify genes and transcript expression from STAR outpute file (Aligned.toTranscriptome.out.bam)
RSEM
STAR
updated 21 months ago by
Ram
44k • written 21 months ago by
otieno43
▴ 30
1
vote
3
replies
898
views
How to improve alignment of scRNA-seq data in using CellRanger
scRNAseq
updated 22 months ago by
dsull
★ 6.0k • written 22 months ago by
otieno43
▴ 30
0
votes
0
replies
898
views
Comment:
Comment: How to improve alignment of scRNA-seq data in using CellRanger
22 months ago by
otieno43
▴ 30
0
votes
0
replies
591
views
Comment:
Comment: How solve solve error associated with cell clustering: quickCluster
22 months ago by
otieno43
▴ 30
0
votes
2
replies
591
views
How solve solve error associated with cell clustering: quickCluster
scRNAseq
22 months ago by
otieno43
▴ 30
0
votes
1
reply
978
views
calculateQCMetrics defunct, how to calculate the quality metrics by perCellQCMetrics
scRNAseq
updated 22 months ago by
Nitin Narwade
★ 1.6k • written 22 months ago by
otieno43
▴ 30
0
votes
0
replies
870
views
Comment:
Comment: Use of Scater for QC in scRNA-seq Analysis: How to remove cells with less than c
23 months ago by
otieno43
▴ 30
2
votes
2
replies
870
views
Use of Scater for QC in scRNA-seq Analysis: How to remove cells with less than certain number of genes supported with certain number of reads
SingleCellExperiment
23 months ago by
otieno43
▴ 30
0
votes
0
replies
2.4k
views
Comment:
Comment: Extract transcript fasta sequences using gtf
2.0 years ago by
otieno43
▴ 30
0
votes
1
reply
2.4k
views
Comment:
Comment: Extract transcript fasta sequences using gtf
2.0 years ago by
otieno43
▴ 30
2
votes
5
replies
2.4k
views
Extract transcript fasta sequences using gtf
transcript
using
fasta
gtf
sequences
updated 2.0 years ago by
rpolicastro
13k • written 2.0 years ago by
otieno43
▴ 30
3
votes
2
replies
2.9k
views
Where and How to find TruSeq Universal Adapter file: TruSeq3-PE.fa
Trimmomatic
adapters
Trimming
using
2.2 years ago by
otieno43
▴ 30
0
votes
0
replies
2.9k
views
Comment:
Comment: Where and How to find TruSeq Universal Adapter file: TruSeq3-PE.fa
2.2 years ago by
otieno43
▴ 30
0
votes
1
reply
1.5k
views
Comment:
Comment: Error in executing STAR Aligner
2.3 years ago by
otieno43
▴ 30
0
votes
1
reply
1.5k
views
Comment:
Comment: Error in executing STAR Aligner
2.3 years ago by
otieno43
▴ 30
0
votes
5
replies
1.5k
views
Error in executing STAR Aligner
Exit
code
102
updated 2.3 years ago by
Jeremy Leipzig
22k • written 2.3 years ago by
otieno43
▴ 30
37 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6