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389
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Comment: Comment: Duplicated reads (IDs) from nanopore sequencing
5 days ago by njornet ▴ 20
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2
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389
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Comment: Comment: Duplicated reads (IDs) from nanopore sequencing
6 days ago by njornet ▴ 20
0
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9
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389
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Duplicated reads (IDs) from nanopore sequencing
bam nanopore sequencing
5 days ago by njornet ▴ 20
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0
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210
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Comment: Comment: Phasing a mixture of two individuals' DNA with long reads
13 days ago by njornet ▴ 20
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2
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210
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Phasing a mixture of two individuals' DNA with long reads
long-reads phasing
13 days ago by njornet ▴ 20
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1
reply
267
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Comment: Comment: Software to separate reads from different individuals
22 days ago by njornet ▴ 20
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3
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267
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Software to separate reads from different individuals
software development nanopore
updated 22 days ago by 142k • written 22 days ago by ▴ 20
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0
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441
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
27 days ago by njornet ▴ 20
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0
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441
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
28 days ago by njornet ▴ 20
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5
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441
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Should I remove unlocalized scaffols in reference genome before alignment?
qualimap alignment minimap2 GRCh38 assembly
27 days ago by njornet ▴ 20
4
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2
replies
388
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Assume "yes" as the answer to any prompts with bioconda
docker container bioconda
updated 4 weeks ago by 8.6k • written 4 weeks ago by ▴ 20
0
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2
replies
329
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Bedmethyl file format
bedmethyl methylation
updated 4 weeks ago by 142k • written 4 weeks ago by ▴ 20
2
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2
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275
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Problem with Sniffles pipeline and SV calling help
SV sniffles StructuralVariant
updated 5 weeks ago by 142k • written 5 weeks ago by ▴ 20
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1
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1.1k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
5 weeks ago by njornet ▴ 20
0
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1
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1.1k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
5 weeks ago by njornet ▴ 20
0
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0
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219
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Comment: Comment: fmols for nanopore library loading
5 weeks ago by njornet ▴ 20
0
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0
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329
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Comment: Comment: Adaptive sampling for whole chromosomes
5 weeks ago by njornet ▴ 20
0
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1
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1.1k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
5 weeks ago by njornet ▴ 20
0
votes
2
replies
219
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fmols for nanopore library loading
nanopore sequencing libraryprep fmol LSK114
updated 5 weeks ago by 142k • written 5 weeks ago by ▴ 20
0
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1
reply
329
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Comment: Comment: Adaptive sampling for whole chromosomes
5 weeks ago by njornet ▴ 20
0
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4
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329
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Adaptive sampling for whole chromosomes
T2T Nanopore AdaptiveSampling aneuploidy centromeres
5 weeks ago by njornet ▴ 20
1
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1
reply
1.1k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
6 weeks ago by njornet ▴ 20
0
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0
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1.1k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
6 weeks ago by njornet ▴ 20
5
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14
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1.1k
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Not getting any modification calls in nanopore reads with dorado basecaller
mofications dorado basecalling nanopore methylation
updated 5 weeks ago by 142k • written 8 weeks ago by ▴ 20
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1
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1.1k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
8 weeks ago by njornet ▴ 20
0
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0
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290
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Comment: Comment: Weird Basecalled reads PHRED quality plot from pycoQC
9 weeks ago by njornet ▴ 20
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2
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290
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Weird Basecalled reads PHRED quality plot from pycoQC
pycoQC nanopore sequencing
9 weeks ago by njornet ▴ 20
0
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0
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146
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SAMstat mapping quality report MAPQ gt vs MAPQ lt
Sequencing mapping samstat
10 weeks ago by njornet ▴ 20
0
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0
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648
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Comment: Comment: Target deletions with adaptive sampling
10 weeks ago by njornet ▴ 20
1
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2
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648
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Comment: Comment: Target deletions with adaptive sampling
10 weeks ago by njornet ▴ 20
3
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6
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648
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Target deletions with adaptive sampling
microdeletions nanopore AdaptiveSampling
10 weeks ago by njornet ▴ 20
0
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0
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286
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Comment: Comment: Considerations for nanopore adaptive sampling enrichment designing
10 weeks ago by njornet ▴ 20
1
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2
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286
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Considerations for nanopore adaptive sampling enrichment designing
adaptive-sampling nanopore
10 weeks ago by njornet ▴ 20
1
vote
2
replies
607
views
Align dorado output to reference
minimap2 bam nanopore dorado
updated 11 weeks ago by 6.4k • written 11 weeks ago by ▴ 20
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