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Comment: Comment: How to assure that sequence consensus is genuine?
5 weeks ago by Brian Bushnell 20k
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902
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Answer: Answer: cutadapt tool
8 weeks ago by Brian Bushnell 20k
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335
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Answer: Answer: Sequence Duplication Levels in targeted sequencing
8 weeks ago by Brian Bushnell 20k
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1.9k
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Answer: Answer: how to know what adapter sequences to trim for RNA-seq?
8 weeks ago by Brian Bushnell 20k
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425
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Answer: Answer: Variant caller for Ion Torrent data
9 weeks ago by Brian Bushnell 20k
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0
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953
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Answer: Answer: Processing fastq files for genome assembly
9 weeks ago by Brian Bushnell 20k
3
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15k
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Answer: Answer: Generating consensus sequence from bam file
9 weeks ago by Brian Bushnell 20k
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0
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623
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Answer: Answer: Target deletions with adaptive sampling
9 weeks ago by Brian Bushnell 20k
2
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0
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636
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Answer: Answer: Getting fasta file from the VCF after variant calling
9 weeks ago by Brian Bushnell 20k
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1
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773
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Comment: Comment: bbmap reds lenght from fastq
9 weeks ago by Brian Bushnell 20k
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1
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7.7k
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Comment: Comment: Randomize Read Order In Multigbp Fastq File?
9 weeks ago by Brian Bushnell 20k
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1.0k
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Comment: Comment: Aligner with statistics included?
3 months ago by Brian Bushnell 20k
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1.5k
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Comment: Comment: What is the correct procedure to generate a consensus bacterial sequence?
3 months ago by Brian Bushnell 20k
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1
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520
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Comment: Comment: Pair ended short reads assemble to multiple references with a plasmid also insid
4 months ago by Brian Bushnell 20k
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930
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Comment: Comment: Individual vs. joint call VCFs
4 months ago by Brian Bushnell 20k
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1
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667
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Comment: Comment: High levels of duplication in ATAC gDNA control?
4 months ago by Brian Bushnell 20k
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733
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Comment: Comment: Is interleaved Fastq files the same as interlaced fastq
5 months ago by Brian Bushnell 20k
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0
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492
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Answer: Answer: PacBio subreads.fastq files?
5 months ago by Brian Bushnell 20k
3
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1
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1.8k
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Answer: Answer: What apps can read large FASTQ files on Windows?
5 months ago by Brian Bushnell 20k
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0
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799
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Comment: Comment: Read count vs Depth
5 months ago by Brian Bushnell 20k
1
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1
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799
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Answer: Answer: Read count vs Depth
5 months ago by Brian Bushnell 20k
0
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3
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1.9k
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Comment: Comment: Building reference dbSNP file using WGS samples
5 months ago by Brian Bushnell 20k
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0
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322
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Comment: Comment: Java error while running HiCDC overview code
5 months ago by Brian Bushnell 20k
0
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1
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960
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Comment: Comment: Which language use as a beginner in Bioinformatics and Computational genomics
5 months ago by Brian Bushnell 20k
0
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1
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960
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Comment: Comment: Which language use as a beginner in Bioinformatics and Computational genomics
5 months ago by Brian Bushnell 20k
1
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1
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1.1k
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Comment: Comment: From TPM to raw counts
5 months ago by Brian Bushnell 20k
2
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1
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1.1k
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Comment: Comment: Using metagenome assembly and binning to identify and mitigate contamination in
5 months ago by Brian Bushnell 20k
0
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1
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495
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Answer: Answer: Low coverage whole genome sequencing reveal excess heterozygosity for multiple S
5 months ago by Brian Bushnell 20k
1
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0
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1.1k
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Comment: Comment: Using metagenome assembly and binning to identify and mitigate contamination in
5 months ago by Brian Bushnell 20k
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0
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608
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Comment: Comment: How Can I move the scattered dots more closer into the center of box ?
5 months ago by Brian Bushnell 20k
4
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0
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869
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Comment: Comment: Problematic fastq files...How can we trust them?
5 months ago by Brian Bushnell 20k
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1
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1.0k
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Comment: Comment: How to filter .fasta file based on conditional statement
5 months ago by Brian Bushnell 20k
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0
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615
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Comment: Comment: How to deeply sequence long inserts
5 months ago by Brian Bushnell 20k
0
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1
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615
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Comment: Comment: How to deeply sequence long inserts
5 months ago by Brian Bushnell 20k
2
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0
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1.0k
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Comment: Comment: SPAdes error: finished abnormally, OS return value: 21
5 months ago by Brian Bushnell 20k
3
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1
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1.0k
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Answer: Answer: SPAdes error: finished abnormally, OS return value: 21
5 months ago by Brian Bushnell 20k
0
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1
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651
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Answer: Answer: subset a bam file
5 months ago by Brian Bushnell 20k
0
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1
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637
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Comment: Comment: selection of reference genome
5 months ago by Brian Bushnell 20k
1
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1
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912
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Answer: Answer: SNPs of a specific mouse strain
5 months ago by Brian Bushnell 20k
3
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1
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637
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Answer: Answer: selection of reference genome
5 months ago by Brian Bushnell 20k
0
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0
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917
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Comment: Comment: BLAST hits on viruses relate to different host than used
5 months ago by Brian Bushnell 20k
2
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1
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1.7k
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Comment: Comment: Bbtools callvariant multisample mode, + base recalibration
5 months ago by Brian Bushnell 20k
0
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1
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1.0k
views
Comment: Comment: How to filter .fasta file based on conditional statement
5 months ago by Brian Bushnell 20k
4
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1
reply
1.0k
views
Answer: Answer: How to filter .fasta file based on conditional statement
5 months ago by Brian Bushnell 20k
1
vote
1
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895
views
Answer: Answer: Working with NCBI downloadable Datasets
5 months ago by Brian Bushnell 20k
0
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0
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895
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Comment: Comment: Working with NCBI downloadable Datasets
5 months ago by Brian Bushnell 20k
1
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0
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569
views
Answer: Answer: Find all locations of aligned reads with MQ (Mapping Quality) = 0.
5 months ago by Brian Bushnell 20k
0
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0
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974
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Comment: Comment: AVX error with Deepvariant caller
5 months ago by Brian Bushnell 20k
2
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0
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714
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Answer: Answer: Is there a good software to generate test genomics data?
5 months ago by Brian Bushnell 20k
2
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0
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347
views
Answer: Answer: Shorten Illumina reads
5 months ago by Brian Bushnell 20k
2,048 results • Page 1 of 41
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