Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
1
vote
0
replies
608
views
Answer:
Answer: Find all locations of aligned reads with MQ (Mapping Quality) = 0.
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
1.0k
views
Comment:
Comment: AVX error with Deepvariant caller
6 months ago by
Brian Bushnell
20k
2
votes
0
replies
753
views
Answer:
Answer: Is there a good software to generate test genomics data?
6 months ago by
Brian Bushnell
20k
2
votes
0
replies
363
views
Answer:
Answer: Shorten Illumina reads
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
1.0k
views
Comment:
Comment: AVX error with Deepvariant caller
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
628
views
Comment:
Comment: Regarding using a "pseudo reference genome" for aligning short reads
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
579
views
Comment:
Comment: Jellyfish problem with Failed to open input file 'reads.jf'
6 months ago by
Brian Bushnell
20k
2
votes
1
reply
1.8k
views
Comment:
Comment: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
1
vote
0
replies
1.8k
views
Comment:
Comment: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
1
vote
2
replies
1.8k
views
Comment:
Comment: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
599
views
Answer:
Answer: Novaseq read coverage needed for demultiplexing
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
1.6k
views
Comment:
Comment: Poly-A trimming for WGBS
6 months ago by
Brian Bushnell
20k
1
vote
0
replies
1.8k
views
Comment:
Comment: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.8k
views
Comment:
Comment: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
2
votes
0
replies
1.8k
views
Comment:
Comment: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
1.8k
views
Comment:
Comment: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
1
vote
0
replies
1.9k
views
Answer:
Answer: BaseRecalibrator takes forever to run. Any suggestions?
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
544
views
Comment:
Comment: Query regarding callsets used as known sites in Variant Calling
6 months ago by
Brian Bushnell
20k
4
votes
3
replies
1.8k
views
Answer:
Answer: Bbtools callvariant multisample mode, + base recalibration
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
1.6k
views
Comment:
Comment: Poly-A trimming for WGBS
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
612
views
Comment:
Comment: Conceptual question about open reading frames
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
445
views
Answer:
Answer: Trimming pair end fastq files merged not interleaved
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
1.6k
views
Answer:
Answer: Poly-A trimming for WGBS
6 months ago by
Brian Bushnell
20k
0
votes
1
reply
544
views
Comment:
Comment: Query regarding callsets used as known sites in Variant Calling
6 months ago by
Brian Bushnell
20k
1
vote
0
replies
646
views
Comment:
Comment: salmon for gene expression quantification
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
766
views
Comment:
Comment: Quality filtering prior to pseudoalignment
6 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.4k
views
Comment:
Comment: Uncertainty of how to proceed with Metagenomic Analysis of WGS data
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
442
views
Answer:
Answer: how to create a consensus sequence from different assemblies
6 months ago by
Brian Bushnell
20k
2
votes
0
replies
1.4k
views
Comment:
Comment: Uncertainty of how to proceed with Metagenomic Analysis of WGS data
6 months ago by
Brian Bushnell
20k
2
votes
2
replies
1.4k
views
Answer:
Answer: Uncertainty of how to proceed with Metagenomic Analysis of WGS data
6 months ago by
Brian Bushnell
20k
1
vote
1
reply
612
views
Answer:
Answer: Conceptual question about open reading frames
6 months ago by
Brian Bushnell
20k
1
vote
0
replies
493
views
Answer:
Answer: Do threads matter for host DNA removal with bbmap?
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
918
views
Comment:
Comment: Can clumpify.sh be used in a streaming fashion downstream of bcl-convert
6 months ago by
Brian Bushnell
20k
0
votes
0
replies
912
views
Answer:
Answer: Detect contaminating organism
6 months ago by
Brian Bushnell
20k
2
votes
2
replies
2.0k
views
Comment:
Comment: Building reference dbSNP file for citrus sinensis using 80 WGS samples
6 months ago by
Brian Bushnell
20k
1
vote
0
replies
1.7k
views
Comment:
Comment: How do I know how much memory to use when piping to with BBMap suite (OutOfMemor
6 months ago by
Brian Bushnell
20k
1
vote
1
reply
897
views
Answer:
Answer: RNA-Seq with DNA contamination, any way to salvage the data?
6 months ago by
Brian Bushnell
20k
1
vote
2
replies
918
views
Comment:
Comment: Can clumpify.sh be used in a streaming fashion downstream of bcl-convert
6 months ago by
Brian Bushnell
20k
1
vote
0
replies
981
views
Comment:
Comment: Command line or python RNA-seq read simulator
6 months ago by
Brian Bushnell
20k
1
vote
1
reply
2.0k
views
Comment:
Comment: Building reference dbSNP file for citrus sinensis using 80 WGS samples
6 months ago by
Brian Bushnell
20k
2
votes
1
reply
7.8k
views
Answer:
Answer: Randomize Read Order In Multigbp Fastq File?
7 months ago by
Brian Bushnell
20k
0
votes
1
reply
688
views
Comment:
Comment: trimming primers using iVar
7 months ago by
Brian Bushnell
20k
1
vote
0
replies
769
views
Comment:
Comment: Best way to use k-mers as a predictor in my neural network
7 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.6k
views
Comment:
Comment: What is the best way to compute genetic distances between FASTQ files?
7 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.2k
views
Comment:
Comment: Tools for reference-guided de novo assembly of bacterial genome
7 months ago by
Brian Bushnell
20k
1
vote
2
replies
2.0k
views
Comment:
Comment: Building reference dbSNP file for citrus sinensis using 80 WGS samples
7 months ago by
Brian Bushnell
20k
1
vote
1
reply
2.0k
views
Comment:
Comment: Building reference dbSNP file for citrus sinensis using 80 WGS samples
7 months ago by
Brian Bushnell
20k
2
votes
1
reply
1.2k
views
Answer:
Answer: Tools for reference-guided de novo assembly of bacterial genome
7 months ago by
Brian Bushnell
20k
3
votes
1
reply
635
views
Answer:
Answer: Exception in thread "main" java.lang.RuntimeException: Sequence and quality leng
7 months ago by
Brian Bushnell
20k
1
vote
1
reply
1.6k
views
Comment:
Comment: What is the best way to compute genetic distances between FASTQ files?
7 months ago by
Brian Bushnell
20k
2,052 results • Page
2 of 42
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6