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Comment: Comment: Problem with Calling Variants from RNA-Seq data
27 minutes ago by i.sudbery 19k
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178
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Answer: Answer: Biomart issue, why so few 3'utrs?
21 hours ago by i.sudbery 19k
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178
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Comment: Comment: Biomart issue, why so few 3'utrs?
22 hours ago by i.sudbery 19k
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374
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
4 days ago by i.sudbery 19k
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1
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374
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
5 days ago by i.sudbery 19k
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0
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465
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Comment: Comment: featureCounts output summary assigned value higher than uniquely mapped reads fr
6 days ago by i.sudbery 19k
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1
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374
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
7 days ago by i.sudbery 19k
1
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1
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374
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
7 days ago by i.sudbery 19k
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1
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374
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
7 days ago by i.sudbery 19k
1
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1
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381
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Answer: Answer: Understanding STAR output (Aligned.out.sam file)
8 days ago by i.sudbery 19k
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1
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385
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Comment: Comment: How does gene length effect the number of reads mapped
11 days ago by i.sudbery 19k
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2
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385
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Comment: Comment: How does gene length effect the number of reads mapped
12 days ago by i.sudbery 19k
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385
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Answer: Answer: How goes gene length effect the number of reads mapped
12 days ago by i.sudbery 19k
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402
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Answer: Answer: What purposes can TPM values be used for?
12 days ago by i.sudbery 19k
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198
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Comment: Comment: Alternatives to metanalyisis. P integration. Horiztonal integration RNA-seq
14 days ago by i.sudbery 19k
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2.2k
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Comment: Comment: NGS forensics: how to know if data is fabricated
15 days ago by i.sudbery 19k
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0
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605
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Comment: Comment: Low mapping rate with Salmon
15 days ago by i.sudbery 19k
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1
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2.2k
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Comment: Comment: NGS forensics: how to know if data is fabricated
16 days ago by i.sudbery 19k
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337
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Comment: Comment: ChIP-seq datasets: input samples omitted?
16 days ago by i.sudbery 19k
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160
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix)?
16 days ago by i.sudbery 19k
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1
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2.2k
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Comment: Comment: NGS forensics: how to know if data is fabricated
16 days ago by i.sudbery 19k
1
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0
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2.2k
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Comment: Comment: NGS forensics: how to know if data is fabricated
16 days ago by i.sudbery 19k
0
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1
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605
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Comment: Comment: Low mapping rate with Salmon
18 days ago by i.sudbery 19k
1
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0
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376
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Comment: Comment: what is the purpose of indexing the reference genome (Kallisto)
19 days ago by i.sudbery 19k
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0
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429
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
21 days ago by i.sudbery 19k
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1
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605
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Comment: Comment: Low mapping rate with Salmon
22 days ago by i.sudbery 19k
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0
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528
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Comment: Comment: Marking duplicates using UMIs
23 days ago by i.sudbery 19k
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1
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528
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Comment: Comment: Marking duplicates using UMIs
23 days ago by i.sudbery 19k
2
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0
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267
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Answer: Answer: Trouble understanding seemingly contradicting results of GSE analysis (contradic
29 days ago by i.sudbery 19k
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1
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1.3k
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Comment: Comment: How I know if it is a batch effect or are real differences between my controls a
5 weeks ago by i.sudbery 19k
6
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1
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1.3k
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Answer: Answer: ¿How I know if it is a batch effect or are real differences between my controls
5 weeks ago by i.sudbery 19k
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1
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469
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Comment: Comment: chromHMM annotations
5 weeks ago by i.sudbery 19k
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1
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469
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Answer: Answer: chromHMM annotations
5 weeks ago by i.sudbery 19k
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453
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Comment: Comment: DESeq: too low p-value for RNAseq
5 weeks ago by i.sudbery 19k
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0
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398
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Comment: Comment: Mathematical/Statistical models to predict mRNA half-life
8 weeks ago by i.sudbery 19k
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1
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482
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Answer: Answer: UMI_extract for paired end reads of micro_RNA
9 weeks ago by i.sudbery 19k
1
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0
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208
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Answer: Answer: Detecting presence of UMI from BAM/fastq files without prior knowledge
9 weeks ago by i.sudbery 19k
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1
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562
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Answer: Answer: conda install -Killed
9 weeks ago by i.sudbery 19k
1
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0
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379
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Answer: Answer: Is it feasible to merge Illumina RNA-Seq data with varying read lengths?
9 weeks ago by i.sudbery 19k
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0
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221
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Comment: Comment: RNA-seq DE with AAV injection
9 weeks ago by i.sudbery 19k
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1
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710
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Comment: Comment: Difference between GLM and Wilcoxon rank sum test
9 weeks ago by i.sudbery 19k
3
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1
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710
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Answer: Answer: Difference between GLM and Wilcoxon rank sum test
10 weeks ago by i.sudbery 19k
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0
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588
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Comment: Comment: minimap2 gets killed, but it doesn't explain why
10 weeks ago by i.sudbery 19k
2
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1
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286
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Answer: Answer: Error from cgat gtf2gtf --method=genes-to-unique-chunks
10 weeks ago by i.sudbery 19k
0
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0
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603
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Comment: Comment: Multiple unique reads sharing same UMI barcode
11 weeks ago by i.sudbery 19k
2
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1
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826
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Answer: Answer: How to interpret the output from a DESeq2 WALD test analysis in R to compare gen
11 weeks ago by i.sudbery 19k
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1
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603
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Comment: Comment: Multiple unique reads sharing same UMI barcode
11 weeks ago by i.sudbery 19k
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1
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603
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Comment: Comment: Multiple unique reads sharing same UMI barcode
11 weeks ago by i.sudbery 19k
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1
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399
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Answer: Answer: perplexed regarding the process of gene expression normalision
11 weeks ago by i.sudbery 19k
1
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0
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307
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Answer: Answer: Heteroscedasticity in RNA-seq data
12 weeks ago by i.sudbery 19k
1,507 results • Page 1 of 31
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