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Comment:
Comment: BWA-mem not working with Snakemake + singularity
14 months ago by
brunobsouzaa
▴ 830
1
vote
1
reply
524
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Answer:
Answer: Can't view the last rows
15 months ago by
brunobsouzaa
▴ 830
0
votes
1
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1.2k
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Comment:
Comment: BWA-mem not working with Snakemake + singularity
15 months ago by
brunobsouzaa
▴ 830
1
vote
5
replies
1.2k
views
BWA-mem not working with Snakemake + singularity
snakemake
bwa
singularity
14 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
908
views
Comment:
Comment: How to use a variable to install an R package
16 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
628
views
Comment:
Comment: Bioinformatics analysis from raw data to disease driver variants
18 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
2.1k
views
Comment:
Comment: Germline variant calling pipeline using Snakemake
19 months ago by
brunobsouzaa
▴ 830
3
votes
1
reply
1.2k
views
Comment:
Comment: How DESeq2 formula correction works?
20 months ago by
brunobsouzaa
▴ 830
1
vote
0
replies
1.3k
views
Comment:
Comment: Is there a way to convert a .vcf.gz.tbi file back to a .vcf.gz or .vcf file?
21 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.4k
views
Comment:
Comment: GATK's selectVariants not outputting VCF
21 months ago by
brunobsouzaa
▴ 830
0
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0
replies
1.4k
views
Comment:
Comment: GATK's selectVariants not outputting VCF
21 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
771
views
Comment:
Comment: Illumina base space
21 months ago by
brunobsouzaa
▴ 830
1
vote
1
reply
1.7k
views
Comment:
Comment: Count regions that overlap with python
22 months ago by
brunobsouzaa
▴ 830
0
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0
replies
1.4k
views
Comment:
Comment: Biopython Code to Convert DNA FASTA file to Protein FASTA file
22 months ago by
brunobsouzaa
▴ 830
0
votes
1
reply
1.1k
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Comment:
Comment: VEP synonyms file
22 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
860
views
Comment:
Comment: add VAF to VCF
22 months ago by
brunobsouzaa
▴ 830
1
vote
1
reply
821
views
Comment:
Comment: PLINK CASE-CONTROL ANALYSIS
22 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
431
views
Comment:
Comment: How can I transform a three column data frame into a binary-table in R?
22 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
718
views
Comment:
Comment: Deleting all the rows from ANY column that contain a key word
23 months ago by
brunobsouzaa
▴ 830
0
votes
1
reply
585
views
Comment:
Comment: The minor allele frequency
24 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
702
views
Comment:
Comment: miRNAs pathway analysis
24 months ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.2k
views
Comment:
Comment: Detect Structural varirant from VCF file
2.0 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
706
views
Comment:
Comment: Statistical methods to determine descrimimant variables between two groups
2.0 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
607
views
Comment:
Comment: gatk requests enormous amounts of memory. How to limit it?
2.0 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.3k
views
Comment:
Comment: Hard filtering on GATK HaplotypeCaller giving multiple warnings
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
855
views
Comment:
Comment: remove vcf variants from bam
2.1 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
956
views
Comment:
Comment: for loop with basename created one merged sam file instead of multiple separate
2.1 years ago by
brunobsouzaa
▴ 830
1
vote
0
replies
571
views
Comment:
Comment: Filter track list and variant list
2.2 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
956
views
Comment:
Comment: STAR aligment generating genome index
2.2 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
463
views
Comment:
Comment: RNA-seq alignment in 2 pass mode
2.2 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
638
views
Comment:
Comment: edgeR, how to write the model matrix for comparison?
2.2 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
528
views
Comment:
Comment: Sanger sequencing
2.2 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
586
views
Comment:
Comment: How to detect CNV via readDepth with multiple samples
2.2 years ago by
brunobsouzaa
▴ 830
1
vote
1
reply
2.3k
views
Comment:
Comment: How to split text into columns using R
2.2 years ago by
brunobsouzaa
▴ 830
1
vote
1
reply
1.0k
views
Comment:
Comment: Merging .bam files in STAR
2.2 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
700
views
Comment:
Comment: Vep combined or single
2.3 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
700
views
Comment:
Comment: Vep combined or single
2.3 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.4k
views
Comment:
Comment: Snakemake issue
2.3 years ago by
brunobsouzaa
▴ 830
5
votes
5
replies
1.4k
views
Snakemake issue
Snakemake
python
updated 2.3 years ago by
Wayne
★ 2.0k • written 2.3 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
848
views
Comment:
Comment: Adding flanking regions to a gene for primer design
2.3 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
939
views
Comment:
Comment: CNV kit merge all my gene names together
2.4 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
2.7k
views
Comment:
Comment: How to extract specific field from VCF?
2.4 years ago by
brunobsouzaa
▴ 830
1
vote
2
replies
2.7k
views
Answer:
Answer: How to extract specific field from VCF?
2.4 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
639
views
Comment:
Comment: ANNOVAR
2.4 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
755
views
Comment:
Comment: Looking for a Bioinformatics Certification course
2.4 years ago by
brunobsouzaa
▴ 830
2
votes
0
replies
789
views
Answer:
Answer: Error in Heat map
2.4 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1000
views
Comment:
Comment: RNA seq
2.5 years ago by
brunobsouzaa
▴ 830
1
vote
2
replies
1000
views
Comment:
Comment: RNA seq
updated 2.5 years ago by
rpolicastro
13k • written 2.5 years ago by
brunobsouzaa
▴ 830
0
votes
1
reply
1.2k
views
Comment:
Comment: ApplyBQSR won't recognise output argument
2.5 years ago by
brunobsouzaa
▴ 830
0
votes
0
replies
1.5k
views
Comment:
Comment: Calculatio median in a Fastq file using bioawk/awk
2.5 years ago by
brunobsouzaa
▴ 830
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