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Comment: Comment: High Malat-1 expression in single cell data
15 days ago by dsull ★ 6.1k
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1
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302
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Answer: Answer: How to compute TPM normalized values for TCGA miRNA data?
16 days ago by dsull ★ 6.1k
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1.0k
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Comment: Comment: High Malat-1 expression in single cell data
19 days ago by dsull ★ 6.1k
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0
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452
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Comment: Comment: How does gene length effect the number of reads mapped
19 days ago by dsull ★ 6.1k
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1.0k
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Comment: Comment: High Malat-1 expression in single cell data
19 days ago by dsull ★ 6.1k
1
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1
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452
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Comment: Comment: How does gene length effect the number of reads mapped
19 days ago by dsull ★ 6.1k
1
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1
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290
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Answer: Answer: RNA-seq data for deep learning classification
20 days ago by dsull ★ 6.1k
0
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469
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Comment: Comment: What purposes can TPM values be used for?
20 days ago by dsull ★ 6.1k
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526
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Comment: Comment: How should I make kallisto indexes?
23 days ago by dsull ★ 6.1k
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0
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526
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Comment: Comment: How should I make kallisto indexes?
23 days ago by dsull ★ 6.1k
1
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1
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526
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Answer: Answer: How should I make kallisto indexes?
23 days ago by dsull ★ 6.1k
1
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1.0k
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Comment: Comment: High Malat-1 expression in single cell data
23 days ago by dsull ★ 6.1k
0
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0
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555
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Comment: Comment: What does it mean single base resolution in sequencing?
23 days ago by dsull ★ 6.1k
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1
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1.0k
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Answer: Answer: High Malat-1 expression in single cell data
23 days ago by dsull ★ 6.1k
0
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1
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555
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Comment: Comment: What does it mean single base resolution in sequencing?
24 days ago by dsull ★ 6.1k
0
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0
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555
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Answer: Answer: What does it mean single base resolution in sequencing?
24 days ago by dsull ★ 6.1k
1
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1
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2.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
25 days ago by dsull ★ 6.1k
2
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1
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2.3k
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Comment: Comment: NGS forensics: how to know if data is fabricated
25 days ago by dsull ★ 6.1k
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0
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830
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Comment: Comment: Heatmap and rna-seq
26 days ago by dsull ★ 6.1k
1
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1
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830
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Answer: Answer: Heatmap and rna-seq
26 days ago by dsull ★ 6.1k
2
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1
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391
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Answer: Answer: what is the purpose of indexing the reference genome (Kallisto)
27 days ago by dsull ★ 6.1k
0
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0
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636
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Comment: Comment: To get p-values for the TPM
28 days ago by dsull ★ 6.1k
1
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1
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636
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Comment: Comment: To get p-values for the TPM
29 days ago by dsull ★ 6.1k
1
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2
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636
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Answer: Answer: To get p-values for the TPM
29 days ago by dsull ★ 6.1k
0
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1
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662
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Comment: Comment: Is it Acceptable to Have Uniform Quality Scores in a FASTQ File?
29 days ago by dsull ★ 6.1k
2
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1
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662
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Answer: Answer: Is it Acceptable to Have Uniform Quality Scores in a FASTQ File?
4 weeks ago by dsull ★ 6.1k
0
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400
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Answer: Answer: How to establish haplotype-specific gene expression levels
26 days ago by dsull ★ 6.1k
1
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0
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362
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Comment: Comment: from row count to tpm
4 weeks ago by dsull ★ 6.1k
1
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0
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213
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Comment: Comment: Help/Direction Needed for Data Analysis of RNA
5 weeks ago by dsull ★ 6.1k
1
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1
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617
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Comment: Comment: STARsolo ; Reads are NOT mapped to transcriptome
6 weeks ago by dsull ★ 6.1k
1
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1
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617
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Answer: Answer: STARsolo ; Reads are NOT mapped to transcriptome
6 weeks ago by dsull ★ 6.1k
0
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1
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400
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Comment: Comment: How to to establish haplotype-specific gene expression levels
6 weeks ago by dsull ★ 6.1k
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0
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315
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Comment: Comment: rRNA depletion of RIP-seq samples
6 weeks ago by dsull ★ 6.1k
1
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1
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228
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Comment: Comment: In need of help with my RNA velocity trajectory inference pipeline!
6 weeks ago by dsull ★ 6.1k
1
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0
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297
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Comment: Comment: Removing adapters in all the RNAseq samples regardless if they have or not, is i
7 weeks ago by dsull ★ 6.1k
0
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0
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618
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Comment: Comment: Installing Cell Ranger
7 weeks ago by dsull ★ 6.1k
0
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0
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439
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Comment: Comment: DESeq2 and normalization
7 weeks ago by dsull ★ 6.1k
0
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0
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618
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Comment: Comment: STAR aligner options
8 weeks ago by dsull ★ 6.1k
1
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0
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946
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Comment: Comment: Only one read per run - Trying to use CellRangerv7
8 weeks ago by dsull ★ 6.1k
0
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1
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618
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Comment: Comment: STAR aligner options
8 weeks ago by dsull ★ 6.1k
1
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1
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439
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Answer: Answer: DESeq2 and normalization
8 weeks ago by dsull ★ 6.1k
0
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0
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7.3k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
8 weeks ago by dsull ★ 6.1k
0
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1
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7.3k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
8 weeks ago by dsull ★ 6.1k
1
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1
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793
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Comment: Comment: cutadapt not trimming all adapters in PE Illumina sequencing
9 weeks ago by dsull ★ 6.1k
1
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1
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793
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Answer: Answer: cutadapt not trimming all adapters in PE Illumina sequencing
9 weeks ago by dsull ★ 6.1k
0
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0
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266
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Comment: Comment: DEG (Differential expression gene) analysis
9 weeks ago by dsull ★ 6.1k
0
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1
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266
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Answer: Answer: DEG (Differential expression gene) analysis
9 weeks ago by dsull ★ 6.1k
3
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1
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403
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Comment: Comment: Average expression of a sample in single-cell data
9 weeks ago by dsull ★ 6.1k
1
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0
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431
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Answer: Answer: scRNAseq normalization
9 weeks ago by dsull ★ 6.1k
0
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0
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179
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Answer: Answer: STAR --sjdbGTFfile in alignment step
10 weeks ago by dsull ★ 6.1k
621 results • Page 1 of 13
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