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309
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Comment: Comment: Help with running egsea()
10 days ago by Chris ▴ 280
1
vote
1
reply
309
views
Comment: Comment: Help with running egsea()
10 days ago by Chris ▴ 280
5
votes
5
replies
309
views
Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent
EGSEA
9 days ago by Chris ▴ 280
0
votes
0
replies
149
views
Empty table plot using plotGseaTable()
FGSEA
14 days ago by Chris ▴ 280
0
votes
0
replies
158
views
Filter low express genes in microarray data
microarray
20 days ago by Chris ▴ 280
1
vote
1
reply
454
views
Difference when using difference number of pathways score to compare between 3 groups
GSVA Limma
updated 26 days ago by ★ 7.2k • written 29 days ago by ▴ 280
0
votes
0
replies
139
views
How to annotate pairwise p value from limma (3 groups) in a combine multiple boxplot?
limma boxplot
5 weeks ago by Chris ▴ 280
0
votes
1
reply
355
views
Comment: Comment: Visualize pathways from MSigDB
6 weeks ago by Chris ▴ 280
3
votes
3
replies
355
views
Visualize pathways from MSigDB
MSigdb
5 weeks ago by Chris ▴ 280
0
votes
0
replies
134
views
How to check if a few pathways have relationship?
MSigdb REACTOME KEGG
7 weeks ago by Chris ▴ 280
0
votes
0
replies
438
views
Comment: Comment: Limma compare between 3 conditions vs 2 conditions
7 weeks ago by Chris ▴ 280
0
votes
0
replies
128
views
Number of pathway result from GSVA
GSVA
7 weeks ago by Chris ▴ 280
1
vote
3
replies
438
views
Limma compare between 3 conditions vs 2 conditions
Limma
updated 4 weeks ago by ★ 7.2k • written 7 weeks ago by ▴ 280
1
vote
1
reply
554
views
Help with SCENIC+
scenic-plus
updated 7 weeks ago by ▴ 10 • written 6 months ago by ▴ 280
0
votes
0
replies
473
views
Comment: Comment: Differential express genes in imbalance groups
8 weeks ago by Chris ▴ 280
0
votes
0
replies
473
views
Comment: Comment: Differential express genes in imbalance groups
8 weeks ago by Chris ▴ 280
4
votes
5
replies
473
views
Differential express genes in imbalance groups
Limma
8 weeks ago by Chris ▴ 280
0
votes
0
replies
285
views
Comment: Comment: Upset plot
8 weeks ago by Chris ▴ 280
1
vote
2
replies
285
views
Upset plot
upsetplot
8 weeks ago by Chris ▴ 280
0
votes
0
replies
289
views
Comment: Comment: How to get genes in a gene set in msigdb?
9 weeks ago by Chris ▴ 280
0
votes
2
replies
289
views
How to get genes in a gene set in msigdb?
msigdb
6 weeks ago by Chris ▴ 280
0
votes
0
replies
142
views
Function normalize raw microarray data for GSVA
gsva
9 weeks ago by Chris ▴ 280
0
votes
0
replies
414
views
Error in validObject(.Object) : invalid class “ExpressionSet” object: sampleNames differ between assayData and phenoData
GSVA
11 weeks ago by Chris ▴ 280
0
votes
1
reply
450
views
Comment: Comment: Differential expression at pathway level
12 weeks ago by Chris ▴ 280
1
vote
0
replies
450
views
Comment: Comment: Differential expression at pathway level
12 weeks ago by Chris ▴ 280
5
votes
4
replies
450
views
Differential expression at pathway level
GSVA
updated 12 weeks ago by ▴ 80 • written 12 weeks ago by ▴ 280
0
votes
1
reply
697
views
Comment: Comment: Remove X in row name with only number
3 months ago by Chris ▴ 280
0
votes
1
reply
697
views
Comment: Comment: Remove X in row name with only number
3 months ago by Chris ▴ 280
0
votes
1
reply
697
views
Comment: Comment: Remove X in row name with only number
3 months ago by Chris ▴ 280
7
votes
12
replies
1.9k
views
Integrated genes from bulk RNA seq and ATAC seq
ATAC-seq bulk-RNA
updated 3 months ago by 43k • written 12 months ago by ▴ 280
0
votes
1
reply
697
views
Comment: Comment: Remove X in row name with only number
3 months ago by Chris ▴ 280
0
votes
1
reply
697
views
Comment: Comment: Remove X in row name with only number
3 months ago by Chris ▴ 280
4
votes
11
replies
697
views
Remove X in row name with only number
GSVA
updated 3 months ago by 43k • written 3 months ago by ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
2
replies
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
0
votes
1
reply
1.3k
views
Comment: Comment: Help with gatk BaseRecalibrator
5 months ago by Chris ▴ 280
12
votes
20
replies
1.3k
views
Help with gatk BaseRecalibrator
GATK variant-calling
updated 5 months ago by 43k • written 5 months ago by ▴ 280
6
votes
4
replies
2.1k
views
Methods to integrate ATAC-seq and RNA-seq
RNA-seq ATAC-seq
updated 5 months ago by ▴ 10 • written 10 months ago by ▴ 280
0
votes
0
replies
439
views
Comment: Comment: Help with gatk CreateSequenceDictionary
5 months ago by Chris ▴ 280
2
votes
2
replies
439
views
Help with gatk CreateSequenceDictionary
GATK
updated 5 months ago by 142k • written 5 months ago by ▴ 280
2
votes
2
replies
1.2k
views
Help with scvelo
scvelo
updated 5 months ago by ★ 2.7k • written 7 months ago by ▴ 280
0
votes
0
replies
481
views
Help with cellchat error
cellchat
updated 6 months ago by 43k • written 6 months ago by ▴ 280
0
votes
1
reply
1.4k
views
Comment: Comment: Visualization of RNA-seq gene expression only one gene of interest between 2 con
7 months ago by Chris ▴ 280
0
votes
1
reply
1.4k
views
Comment: Comment: Visualization of RNA-seq gene expression only one gene of interest between 2 con
7 months ago by Chris ▴ 280
497 results • Page 1 of 10
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