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Comment:
Comment: How can I calculate the OS of each patient?
17 hours ago by
ATpoint
82k
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0
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219
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Comment:
Comment: Can I perform a correlation test with 3 biological replicates per condition?
19 hours ago by
ATpoint
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219
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Answer:
Answer: Can I perform a correlation test with 3 biological replicates per condition?
20 hours ago by
ATpoint
82k
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vote
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219
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Comment:
Comment: Can I perform a correlation test with 3 biological replicates per condition?
20 hours ago by
ATpoint
82k
1
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565
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
20 hours ago by
ATpoint
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0
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245
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Comment:
Comment: Would you bother re-mapping RNA-seq data from an old GRCh38 build to a newer ver
20 hours ago by
ATpoint
82k
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0
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565
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
23 hours ago by
ATpoint
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174
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Comment:
Comment: Details on salmon index
23 hours ago by
ATpoint
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2
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565
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Answer:
Answer: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
22 hours ago by
ATpoint
82k
0
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0
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221
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Comment:
Comment: Getting differential ChIP-seq peaks between conditions after calling consensus p
23 hours ago by
ATpoint
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565
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
1 day ago by
ATpoint
82k
3
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1
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221
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Answer:
Answer: Getting differential ChIP-seq peaks between conditions after calling consensus p
1 day ago by
ATpoint
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0
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254
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Comment:
Comment: RNAseq RNA content
2 days ago by
ATpoint
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1
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2
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379
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Comment:
Comment: Overlapping Ranges within Granges object
2 days ago by
ATpoint
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1
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0
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145
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Comment:
Comment: sci-RNA-seq
2 days ago by
ATpoint
82k
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1
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379
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Answer:
Answer: Overlapping Ranges within Granges object
2 days ago by
ATpoint
82k
0
votes
0
replies
380
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Comment:
Comment: BWA alignment
3 days ago by
ATpoint
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1
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219
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Answer:
Answer: Inquiry about deseq2 transformation
3 days ago by
ATpoint
82k
1
vote
0
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172
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Answer:
Answer: The total expressed genes in RNA-Seq data
3 days ago by
ATpoint
82k
0
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0
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131
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Answer:
Answer: What is the bin size for Bamcompare?
3 days ago by
ATpoint
82k
0
votes
1
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380
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Comment:
Comment: BWA alignment
3 days ago by
ATpoint
82k
2
votes
0
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189
views
Comment:
Comment: Publish a Letter in higher impact vs Research article in lower impact
3 days ago by
ATpoint
82k
1
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1
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358
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Comment:
Comment: How to remove multiple batch effects from RNA-seq data before limma differential
4 days ago by
ATpoint
82k
1
vote
0
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566
views
Comment:
Comment: Tissue-specific DEG analysis with DEseq2
4 days ago by
ATpoint
82k
2
votes
1
reply
276
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Answer:
Answer: error in fun(x((i)), ...) : only defined on a data frame with all numeric alike
5 days ago by
ATpoint
82k
1
vote
0
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215
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Answer:
Answer: DESeq2 error
7 days ago by
ATpoint
82k
0
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0
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217
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Comment:
Comment: When should I use R-MarkDown over R-Script ?
7 days ago by
ATpoint
82k
0
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1
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230
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Comment:
Comment: LncRNA Nomenclature
7 days ago by
ATpoint
82k
0
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1
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330
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Answer:
Answer: How to convert normalized BigWig file to count matrix?
7 days ago by
ATpoint
82k
1
vote
1
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404
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Comment:
Comment: Importing a fastq file
8 days ago by
ATpoint
82k
0
votes
0
replies
483
views
Comment:
Comment: RNA seq analysis
8 days ago by
ATpoint
82k
1
vote
1
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210
views
Answer:
Answer: How do I change the title font size in ViolinPlot (Seurat)
8 days ago by
ATpoint
82k
0
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0
replies
213
views
Comment:
Comment: Exploring Diet Effects in Single-Cell RNA Sequencing
8 days ago by
ATpoint
82k
0
votes
1
reply
322
views
Comment:
Comment: A question about reference genome for creating the consensus sequence
9 days ago by
ATpoint
82k
0
votes
1
reply
322
views
Answer:
Answer: A question about reference genome for creating the consensus sequence
9 days ago by
ATpoint
82k
1
vote
1
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188
views
Comment:
Comment: Repeated testing/data mining in RNA Seq
9 days ago by
ATpoint
82k
0
votes
0
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226
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Comment:
Comment: Differentail gene expression results
9 days ago by
ATpoint
82k
1
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0
replies
173
views
Comment:
Comment: student
9 days ago by
ATpoint
82k
0
votes
0
replies
184
views
Answer:
Answer: What is the proper way to identify the cell types of scRNAseq cluster?
10 days ago by
ATpoint
82k
1
vote
0
replies
247
views
Comment:
Comment: error in R code
10 days ago by
ATpoint
82k
1
vote
1
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566
views
Answer:
Answer: Tissue-specific DEG analysis with DEseq2
10 days ago by
ATpoint
82k
0
votes
0
replies
349
views
Answer:
Answer: install.packages("imudata")
11 days ago by
ATpoint
82k
0
votes
1
reply
275
views
Comment:
Comment: creating batch colum for batch correction
12 days ago by
ATpoint
82k
0
votes
1
reply
473
views
Comment:
Comment: Differential Expression Analysis using DESeq2 in R
13 days ago by
ATpoint
82k
1
vote
0
replies
331
views
Comment:
Comment: Generating mpileup file using samtools
13 days ago by
ATpoint
82k
2
votes
0
replies
263
views
Answer:
Answer: Analysis of intronic reads included scRNA-seq data
13 days ago by
ATpoint
82k
1
vote
0
replies
368
views
Comment:
Comment: What analysis suitable to identify similarly expressed genes between two samples
13 days ago by
ATpoint
82k
1
vote
0
replies
202
views
Answer:
Answer: DSEQ2 analysis
13 days ago by
ATpoint
82k
0
votes
0
replies
308
views
Comment:
Comment: Does comparing two different groups to a common third group introduce bias in th
14 days ago by
ATpoint
82k
2
votes
0
replies
331
views
Comment:
Comment: Problem with data downloaded from Short Reads Archive (SRA)
14 days ago by
ATpoint
82k
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