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Comment: Comment: How to generate table_annovar from VCF input?
1 hour ago by Pierre Lindenbaum 161k
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175
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Comment: Comment: Sam file Header problem
1 hour ago by Pierre Lindenbaum 161k
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164
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Comment: Comment: getting exon coordinates
updated 19 hours ago by 142k • written 19 hours ago by 161k
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331
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Comment: Comment: finding evidence(s) of a peptide translated from an "Upstream Open Reading Frame
19 hours ago by Pierre Lindenbaum 161k
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4
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331
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finding evidence(s) of a peptide translated from an "Upstream Open Reading Frame (uORF)"
UTR masspec uORF peptide
updated 19 hours ago by 142k • written 23 hours ago by 161k
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175
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Comment: Comment: Sam file Header problem
1 day ago by Pierre Lindenbaum 161k
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1
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585
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Comment: Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
1 day ago by Pierre Lindenbaum 161k
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1
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277
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Comment: Comment: Filtering VCF files based on VAF giving incorrect results
1 day ago by Pierre Lindenbaum 161k
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1
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585
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Comment: Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
1 day ago by Pierre Lindenbaum 161k
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1
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187
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Answer: Answer: Genotyping sites with N in reference genome
1 day ago by Pierre Lindenbaum 161k
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229
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Comment: Comment: Sequencing Depth (Read Depth) Calculations
1 day ago by Pierre Lindenbaum 161k
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180
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Comment: Comment: Cannot install bwa-mem2 via conda
updated 18 hours ago by 43k • written 1 day ago by 161k
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214
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
1 day ago by Pierre Lindenbaum 161k
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214
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
1 day ago by Pierre Lindenbaum 161k
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1
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214
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Comment: Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
1 day ago by Pierre Lindenbaum 161k
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0
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256
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Comment: Comment: Annotating file using bcftools
1 day ago by Pierre Lindenbaum 161k
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2
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256
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Answer: Answer: Annotating file using bcftools
1 day ago by Pierre Lindenbaum 161k
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694
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Comment: Comment: Filtering Multi-sample VCF file for all except one Genotype
2 days ago by Pierre Lindenbaum 161k
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1
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277
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Answer: Answer: Filtering VCF files based on VAF giving incorrect results
2 days ago by Pierre Lindenbaum 161k
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1
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175
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Comment: Comment: Is it necessary to do genotype quality filteration after snp calling with GATK
3 days ago by Pierre Lindenbaum 161k
1
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0
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178
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Answer: Answer: Duplicated sequence samtools
3 days ago by Pierre Lindenbaum 161k
0
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0
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419
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Comment: Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
4 days ago by Pierre Lindenbaum 161k
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0
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375
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
4 days ago by Pierre Lindenbaum 161k
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1
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375
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
4 days ago by Pierre Lindenbaum 161k
2
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1
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375
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Answer: Answer: joint callset and vcf sorting, unknown TAG issue
4 days ago by Pierre Lindenbaum 161k
0
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1
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375
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Comment: Comment: joint callset and vcf sorting, unknown TAG issue
4 days ago by Pierre Lindenbaum 161k
0
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1
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419
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Comment: Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
5 days ago by Pierre Lindenbaum 161k
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1
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229
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Comment: Comment: java.nio.bufferunderflowexception haplotypecaller error for bqsr reads
5 days ago by Pierre Lindenbaum 161k
2
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0
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232
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Answer: Answer: Failed to open VCF file
5 days ago by Pierre Lindenbaum 161k
0
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2
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419
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Answer: Answer: Is it Possible to "Merge" data from Replicates within a VCF SNP File
4 days ago by Pierre Lindenbaum 161k
1
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0
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280
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Comment: Comment: what is another word for a BLAST "hit"?
6 days ago by Pierre Lindenbaum 161k
0
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1
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533
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Comment: Comment: In IGV is this a heterogeneous mutation or false call?
6 days ago by Pierre Lindenbaum 161k
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2
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533
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Comment: Comment: In IGV is this a heterogeneous mutation or false call?
6 days ago by Pierre Lindenbaum 161k
0
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1
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533
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Answer: Answer: In IGV is this a heterogeneous mutation or false call?
6 days ago by Pierre Lindenbaum 161k
0
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283
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
6 days ago by Pierre Lindenbaum 161k
0
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1
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283
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
6 days ago by Pierre Lindenbaum 161k
1
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1
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694
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Answer: Answer: Filtering Multi-sample VCF file for all except one Genotype
6 days ago by Pierre Lindenbaum 161k
0
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1
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449
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Comment: Comment: Different output for read length
7 days ago by Pierre Lindenbaum 161k
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2
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449
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Answer: Answer: Different output for read length
7 days ago by Pierre Lindenbaum 161k
0
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0
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298
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Comment: Comment: bcftools - reducing to "sites-only"?
7 days ago by Pierre Lindenbaum 161k
0
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1
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330
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Comment: Comment: How to convert normalized BigWig file to count matrix?
7 days ago by Pierre Lindenbaum 161k
1
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0
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2.9k
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Comment: Comment: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
7 days ago by Pierre Lindenbaum 161k
0
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0
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228
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Comment: Comment: Nextflow: how to get the process work dir, within the process
7 days ago by Pierre Lindenbaum 161k
3
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1
reply
2.9k
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Answer: Answer: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
7 days ago by Pierre Lindenbaum 161k
2
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1
reply
228
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Answer: Answer: Nextflow: how to get the process work dir, within the process
7 days ago by Pierre Lindenbaum 161k
1
vote
1
reply
263
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Comment: Comment: Help with Biopython for Beginner
updated 8 days ago by 43k • written 8 days ago by 161k
0
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1
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298
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Answer: Answer: bcftools - reducing to "sites-only"?
8 days ago by Pierre Lindenbaum 161k
0
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1
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694
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Comment: Comment: Filtering Multi-sample VCF file for all except one Genotype
9 days ago by Pierre Lindenbaum 161k
2
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1
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250
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Answer: Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB
11 days ago by Pierre Lindenbaum 161k
1
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1
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763
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Answer: Answer: Create a new bed file with all pairwise combinations between two other bed files
20 days ago by Pierre Lindenbaum 161k
12,471 results • Page 1 of 250
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