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556
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Comment: Comment: Development plan for a bioinformatics database developer/coder
3 months ago by pixie@bioinfo ★ 1.5k
1
vote
3
replies
556
views
Forum: Development plan for a bioinformatics database developer/coder
developer
3 months ago by pixie@bioinfo ★ 1.5k
1
vote
2
replies
288
views
Internal controls/ Reference Samples for Nanopore
nanopore
updated 4 months ago by ★ 2.0k • written 4 months ago by ★ 1.5k
0
votes
0
replies
648
views
Comment: Comment: Regarding using a "pseudo reference genome" for aligning short reads
4 months ago by pixie@bioinfo ★ 1.5k
0
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1
reply
1.1k
views
Comment: Comment: WGCNA kME vs kWithin Hub Gene Disparities
5 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
269
views
Identifying Multipartite viruses (Viral Bioinformatics)
genomics
5 months ago by pixie@bioinfo ★ 1.5k
2
votes
3
replies
648
views
Regarding using a "pseudo reference genome" for aligning short reads
genomics
4 months ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
527
views
Comment: Comment: How to proceed after Kraken2 analysis
7 months ago by pixie@bioinfo ★ 1.5k
3
votes
3
replies
527
views
How to proceed after Kraken2 analysis
rnaseq kraken
updated 7 months ago by ★ 2.0k • written 7 months ago by ★ 1.5k
31
votes
11
replies
6.8k
views
8 follow
Basics Of Systems Biology...
network
updated 11 months ago by • 0 • written 13.9 years ago by ★ 1.5k
2
votes
1
reply
608
views
Sequence statistics to report viruses (or bacteria and fungi) using Nanopore for diagnostic purpose
nanopore
updated 14 months ago by 6.4k • written 15 months ago by ★ 1.5k
8
votes
4
replies
1.0k
views
Forum: Implementing FAIR data principles to a bioinformatics lab
data
updated 15 months ago by 22k • written 15 months ago by ★ 1.5k
0
votes
1
reply
478
views
Trimming SSR (repetitive primer) sequences
genomics
updated 19 months ago by 143k • written 19 months ago by ★ 1.5k
0
votes
3
replies
711
views
Calculate distribution of reads over the reference genome
ngs
updated 20 months ago by 21k • written 20 months ago by ★ 1.5k
1
vote
2
replies
605
views
Identifying reliable regions of reference genomes
snp genomics
updated 22 months ago by ★ 1.8k • written 22 months ago by ★ 1.5k
0
votes
1
reply
672
views
Comment: Comment: Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
23 months ago by pixie@bioinfo ★ 1.5k
0
votes
3
replies
672
views
Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
Illumina mini-seq
updated 23 months ago by 143k • written 23 months ago by ★ 1.5k
0
votes
0
replies
661
views
Forum: Bioinformatics for understanding cancer and other diseases
cancer omics
updated 18 months ago by 44k • written 2.0 years ago by ★ 1.5k
0
votes
0
replies
373
views
pysam fetch alignments corresponding to a taxid
pysam samtools
2.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
574
views
Comment: Comment: How to calculate p-value for Network Data (Cluster Detection)
2.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
574
views
How to calculate p-value for Network Data (Cluster Detection)
network correlation
2.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
409
views
Diagnostic Plots for SNP quality assesment
vcf
2.3 years ago by pixie@bioinfo ★ 1.5k
2
votes
1
reply
649
views
VCF file, calculate depth per sample
vcf bcftools
updated 2.3 years ago by ▴ 520 • written 2.3 years ago by ★ 1.5k
0
votes
1
reply
631
views
Comment: Comment: Identify predicted TF targets by binding motif
2.3 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
747
views
Problem with VCF format while using "VariantAnnotation" R package
vcf
updated 2.4 years ago by ★ 1.5k • written 2.4 years ago by ★ 1.5k
8
votes
11
replies
6.8k
views
6 follow
Heatmap In R-Wgcna-->Error While Plotting Tom
r heatmap
updated 2.4 years ago by • 0 • written 10.9 years ago by ★ 1.5k
0
votes
0
replies
432
views
Information about Genotyping by Sequencing (GBS)
snp
updated 2.6 years ago by 143k • written 2.6 years ago by ★ 1.5k
0
votes
0
replies
612
views
Create combined CpG and non-CpG bedgraphs for DNA methylation using Bismark
methylation
2.7 years ago by pixie@bioinfo ★ 1.5k
2
votes
2
replies
747
views
R programming: basics to challenging
R
updated 2.9 years ago by 83k • written 2.9 years ago by ★ 1.5k
0
votes
1
reply
1.4k
views
Plots for Correlation between two dataframes by row
R
updated 3.0 years ago by 88k • written 3.0 years ago by ★ 1.5k
0
votes
2
replies
668
views
Ideas to represent RNA-seq expression profile (Z-scores) and the significance level at the same time
R RNAseq
updated 3.0 years ago by ★ 2.9k • written 3.0 years ago by ★ 1.5k
2
votes
9
replies
23k
views
7 follow
HISAT error: Encountered internal HISAT2 exception (#1)
RNA-Seq
updated 3.1 years ago by • 0 • written 7.0 years ago by ★ 1.5k
0
votes
1
reply
1.1k
views
Segmentation fault with HOMER
homer HiC
updated 2.4 years ago by • 0 • written 3.2 years ago by ★ 1.5k
2
votes
3
replies
2.3k
views
Forum: MOOC for AI and Machine learning for Bioinformatics
ML AI
updated 15 months ago by 44k • written 3.8 years ago by ★ 1.5k
0
votes
1
reply
546
views
P value for test for proportions and random sampling
R
3.4 years ago by pixie@bioinfo ★ 1.5k
2
votes
0
replies
1.3k
views
Answer: A: Self Organizing Maps for RNA-seq data
updated 3.6 years ago by 143k • written 3.6 years ago by ★ 1.5k
4
votes
3
replies
1.3k
views
Self Organizing Maps for RNA-seq data
RNA-Seq
3.6 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
1.3k
views
Comment: C: Self Organizing Maps for RNA-seq data
3.6 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
1.7k
views
Comment: C: Using Deeptool for profile plots
3.6 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
1.7k
views
Comment: C: Using Deeptool for profile plots
3.6 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
1.7k
views
Comment: C: Using Deeptool for profile plots
3.6 years ago by pixie@bioinfo ★ 1.5k
2
votes
5
replies
1.7k
views
Using Deeptool for profile plots
deeptools
3.6 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
754
views
Issue with Diffreps
ChIP-Seq
3.6 years ago by pixie@bioinfo ★ 1.5k
4
votes
2
replies
2.6k
views
Bismark: bedgraph to bigwig for DNA methylation
methylation
updated 3.6 years ago by ▴ 20 • written 3.7 years ago by ★ 1.5k
0
votes
0
replies
627
views
Ideas Regarding TF regulatory network
network
3.6 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
1.6k
views
CUT&RUN analysis pipeline
alignment sequencing
updated 3.6 years ago by 13k • written 3.6 years ago by ★ 1.5k
1
vote
1
reply
776
views
Bedtools to make a bed file for promoter
bedtools
updated 3.7 years ago by 11k • written 3.7 years ago by ★ 1.5k
1
vote
1
reply
1.2k
views
DMR detection tools for whole genome bisulphite sequencing data in Plants
R
updated 3.7 years ago by ▴ 370 • written 3.7 years ago by ★ 1.5k
7
votes
6
replies
1.8k
views
Plant orthologous genes
gene
updated 3.8 years ago by 15k • written 3.8 years ago by ★ 1.5k
11
votes
4
replies
16k
views
Importing Network From Wgcna Into Cytoscape
cytoscape network
updated 2.4 years ago by ▴ 30 • written 11.4 years ago by ★ 1.5k
255 results • Page 1 of 6
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