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453
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Comment:
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
2 days ago by
b.contreras.moreira
▴ 200
1
vote
1
reply
453
views
Answer:
Answer: Faster Needleman-Wunsch rapid global alignment of two sequences?
2 days ago by
b.contreras.moreira
▴ 200
1
vote
0
replies
347
views
Answer:
Answer: TFs and Gene databases
11 days ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
445
views
Answer:
Answer: What purposes can TPM values be used for?
16 days ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
400
views
Answer:
Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in
24 days ago by
b.contreras.moreira
▴ 200
1
vote
0
replies
338
views
Comment:
Comment: How to calculate identity percentage between proteins contained in a FASTA file?
25 days ago by
b.contreras.moreira
▴ 200
2
votes
1
reply
759
views
Answer:
Answer: Mapping cDNA sequence of a single gene to a genome not hosted at UCSC server (wi
4 weeks ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
547
views
Comment:
Comment: Odd results with BLAST remote
4 weeks ago by
b.contreras.moreira
▴ 200
2
votes
2
replies
547
views
Answer:
Answer: Odd results with BLAST remote
4 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
305
views
Answer:
Answer: Beagle imputation
5 weeks ago by
b.contreras.moreira
▴ 200
1
vote
0
replies
611
views
Comment:
Comment: NCBI MEGABLAST versus UCSC BLAT
5 weeks ago by
b.contreras.moreira
▴ 200
1
vote
1
reply
611
views
Answer:
Answer: NCBI MEGABLAST versus UCSC BLAT
5 weeks ago by
b.contreras.moreira
▴ 200
4
votes
2
replies
738
views
Answer:
Answer: How to BLAST more than 5 sequences against UniProt database?
6 weeks ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
6 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
7 weeks ago by
b.contreras.moreira
▴ 200
1
vote
0
replies
618
views
Comment:
Comment: Should I use Dfam or a custom repetitve elements library (from PlantRep) as a re
7 weeks ago by
b.contreras.moreira
▴ 200
4
votes
2
replies
592
views
Answer:
Answer: Pan genome of plant
7 weeks ago by
b.contreras.moreira
▴ 200
1
vote
1
reply
618
views
Answer:
Answer: Should I use Dfam or a custom repetitve elements library (from PlantRep) as a re
7 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
7 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by
b.contreras.moreira
▴ 200
2
votes
18
replies
1.7k
views
error when running phg create-maf-vcf to build a built practical haplotype graph (v2)
pangenome
phg_v2
plants
PHG
6 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
1.7k
views
Comment:
Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by
b.contreras.moreira
▴ 200
1
vote
1
reply
233
views
adding new assemblies to previously built practical haplotype graph (v2)
pangenome
phg_v2
plants
PHG
updated 8 weeks ago by
lcj34
▴ 420 • written 8 weeks ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
246
views
Answer:
Answer: converting VCF files to TSV file
9 weeks ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
790
views
Answer:
Answer: Intersect gene IDs list and GFF3 to get the annotation.
9 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
739
views
Comment:
Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
739
views
Comment:
Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
739
views
Comment:
Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by
b.contreras.moreira
▴ 200
3
votes
10
replies
739
views
Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
pangenome
plants
PHG
updated 9 weeks ago by
lcj34
▴ 420 • written 9 weeks ago by
b.contreras.moreira
▴ 200
0
votes
1
reply
739
views
Comment:
Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
1.2k
views
Answer:
Answer: Pan genome of genes
9 weeks ago by
b.contreras.moreira
▴ 200
0
votes
0
replies
462
views
Answer:
Answer: Get_Homologues
7 weeks ago by
b.contreras.moreira
▴ 200
2
votes
1
reply
358
views
how to add non-reference genes to BED file of intervals for PHG
pangenome
plants
PHG
updated 10 weeks ago by
lcj34
▴ 420 • written 10 weeks ago by
b.contreras.moreira
▴ 200
1
vote
0
replies
3.8k
views
Answer:
Answer: define PFAM dir in get_homologues perl script
updated 2.3 years ago by
Ram
43k • written 9.5 years ago by
b.contreras.moreira
▴ 200
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