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207
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Comment:
Comment: How to generate table_annovar from VCF input?
1 day ago by
Pierre Lindenbaum
161k
0
votes
0
replies
271
views
Comment:
Comment: Sam file Header problem
1 day ago by
Pierre Lindenbaum
161k
2
votes
0
replies
225
views
Comment:
Comment: getting exon coordinates
updated 2 days ago by
GenoMax
142k • written 2 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
388
views
Comment:
Comment: finding evidence(s) of a peptide translated from an "Upstream Open Reading Frame
2 days ago by
Pierre Lindenbaum
161k
3
votes
4
replies
388
views
finding evidence(s) of a peptide translated from an "Upstream Open Reading Frame (uORF)"
UTR
masspec
uORF
peptide
updated 2 days ago by
GenoMax
142k • written 2 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
271
views
Comment:
Comment: Sam file Header problem
2 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
723
views
Comment:
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
2 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
288
views
Comment:
Comment: Filtering VCF files based on VAF giving incorrect results
3 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
723
views
Comment:
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
3 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
208
views
Answer:
Answer: Genotyping sites with N in reference genome
3 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
242
views
Comment:
Comment: Sequencing Depth (Read Depth) Calculations
3 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
187
views
Comment:
Comment: Cannot install bwa-mem2 via conda
updated 2 days ago by
Ram
43k • written 3 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
221
views
Comment:
Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
3 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
221
views
Comment:
Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
3 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
221
views
Comment:
Comment: Circos Plot to Visualize Chromatin Accessibility Changes from ATAC-seq Data
3 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
266
views
Comment:
Comment: Annotating file using bcftools
3 days ago by
Pierre Lindenbaum
161k
1
vote
2
replies
266
views
Answer:
Answer: Annotating file using bcftools
3 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
710
views
Comment:
Comment: Filtering Multi-sample VCF file for all except one Genotype
3 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
288
views
Answer:
Answer: Filtering VCF files based on VAF giving incorrect results
3 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
184
views
Comment:
Comment: Is it necessary to do genotype quality filteration after snp calling with GATK
4 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
183
views
Answer:
Answer: Duplicated sequence samtools
5 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
427
views
Comment:
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
6 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
388
views
Comment:
Comment: joint callset and vcf sorting, unknown TAG issue
6 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
388
views
Comment:
Comment: joint callset and vcf sorting, unknown TAG issue
6 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
388
views
Answer:
Answer: joint callset and vcf sorting, unknown TAG issue
6 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
388
views
Comment:
Comment: joint callset and vcf sorting, unknown TAG issue
6 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
427
views
Comment:
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
7 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
235
views
Comment:
Comment: java.nio.bufferunderflowexception haplotypecaller error for bqsr reads
7 days ago by
Pierre Lindenbaum
161k
2
votes
0
replies
234
views
Answer:
Answer: Failed to open VCF file
7 days ago by
Pierre Lindenbaum
161k
0
votes
2
replies
427
views
Answer:
Answer: Is it Possible to "Merge" data from Replicates within a VCF SNP File
6 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
285
views
Comment:
Comment: what is another word for a BLAST "hit"?
8 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
550
views
Comment:
Comment: In IGV is this a heterogeneous mutation or false call?
8 days ago by
Pierre Lindenbaum
161k
0
votes
2
replies
550
views
Comment:
Comment: In IGV is this a heterogeneous mutation or false call?
8 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
550
views
Answer:
Answer: In IGV is this a heterogeneous mutation or false call?
8 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
291
views
Comment:
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
8 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
291
views
Comment:
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
8 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
710
views
Answer:
Answer: Filtering Multi-sample VCF file for all except one Genotype
8 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
462
views
Comment:
Comment: Different output for read length
9 days ago by
Pierre Lindenbaum
161k
0
votes
2
replies
462
views
Answer:
Answer: Different output for read length
9 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
306
views
Comment:
Comment: bcftools - reducing to "sites-only"?
9 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
340
views
Comment:
Comment: How to convert normalized BigWig file to count matrix?
9 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
2.9k
views
Comment:
Comment: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
9 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
234
views
Comment:
Comment: Nextflow: how to get the process work dir, within the process
9 days ago by
Pierre Lindenbaum
161k
3
votes
1
reply
2.9k
views
Answer:
Answer: How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when ru
9 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
234
views
Answer:
Answer: Nextflow: how to get the process work dir, within the process
9 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
311
views
Comment:
Comment: Help with Biopython for Beginner
updated 10 days ago by
Ram
43k • written 10 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
306
views
Answer:
Answer: bcftools - reducing to "sites-only"?
10 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
710
views
Comment:
Comment: Filtering Multi-sample VCF file for all except one Genotype
11 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
260
views
Answer:
Answer: STRING-DB API can't find my protein but I can find it when I go to the STRING-DB
13 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
773
views
Answer:
Answer: Create a new bed file with all pairwise combinations between two other bed files
22 days ago by
Pierre Lindenbaum
161k
12,471 results • Page
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