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Comment: Comment: Pseudobulking per patient
1 day ago by jared.andrews07 ★ 17k
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118
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Answer: Answer: gProfiler vs Panther_go in overrepresentation pathways R analysis
1 day ago by jared.andrews07 ★ 17k
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189
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Answer: Answer: Pseudobulking per patient
1 day ago by jared.andrews07 ★ 17k
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164
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Comment: Comment: Is there a common acceptance criteria for sample contamination?
1 day ago by jared.andrews07 ★ 17k
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186
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Answer: Answer: InferCNV results interpretation
2 days ago by jared.andrews07 ★ 17k
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1
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393
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Comment: Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
4 days ago by jared.andrews07 ★ 17k
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1
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393
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Answer: Answer: How to add Ensembl ids after Pseudobulk analysis by DESeq2
6 days ago by jared.andrews07 ★ 17k
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237
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Answer: Answer: Facing problem with single cell rna seq annotation using singleR
updated 4 days ago by 44k • written 6 days ago by ★ 17k
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491
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Comment: Comment: Harmony integration group.by.var parameter
6 days ago by jared.andrews07 ★ 17k
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491
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Comment: Comment: Harmony integration group.by.var parameter
8 days ago by jared.andrews07 ★ 17k
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2
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491
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Answer: Answer: Harmony integration group.by.var parameter
8 days ago by jared.andrews07 ★ 17k
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1
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259
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Answer: Answer: Trying to understand warning from MACS2 about too few paired peaks and differing
9 days ago by jared.andrews07 ★ 17k
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473
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Answer: Answer: Mouse or Rat Gene Expression Data Similar to GTEx
9 days ago by jared.andrews07 ★ 17k
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470
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Comment: Comment: Super ehancers
11 days ago by jared.andrews07 ★ 17k
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1
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470
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Comment: Comment: Super ehancers
12 days ago by jared.andrews07 ★ 17k
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337
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Comment: Comment: Using ggplotly in R
17 days ago by jared.andrews07 ★ 17k
1
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1
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337
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Answer: Answer: Using ggplotly in R
18 days ago by jared.andrews07 ★ 17k
10
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405
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Answer: Answer: TFs and Gene databases
25 days ago by jared.andrews07 ★ 17k
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328
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Answer: Answer: DiffBind: no peaks in DBA
4 weeks ago by jared.andrews07 ★ 17k
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1
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470
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Answer: Answer: Super ehancers
4 weeks ago by jared.andrews07 ★ 17k
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521
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Answer: Answer: What purposes can TPM values be used for?
4 weeks ago by jared.andrews07 ★ 17k
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373
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Comment: Comment: Visualize pathways from MSigDB
8 weeks ago by jared.andrews07 ★ 17k
2
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1
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373
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Answer: Answer: Visualize pathways from MSigDB
8 weeks ago by jared.andrews07 ★ 17k
3
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1
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488
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Comment: Comment: Seeking Help with Unexpected MA Plot Output
8 weeks ago by jared.andrews07 ★ 17k
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1
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302
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Answer: Answer: Update R in Posit Workbench
9 weeks ago by jared.andrews07 ★ 17k
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243
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Comment: Comment: MACS3 or SEACR
9 weeks ago by jared.andrews07 ★ 17k
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261
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Comment: Comment: AUTODOCK TOOLS ERRO
9 weeks ago by jared.andrews07 ★ 17k
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0
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235
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Answer: Answer: Seeking for edgeR TMM Normalization calcul example
10 weeks ago by jared.andrews07 ★ 17k
2
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0
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824
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Comment: Comment: I need a consultation about my workflow.
10 weeks ago by jared.andrews07 ★ 17k
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1
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563
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Answer: Answer: Error when trying to install R package 'scater'
10 weeks ago by jared.andrews07 ★ 17k
1
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249
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Answer: Answer: Seurat 5 integration
10 weeks ago by jared.andrews07 ★ 17k
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0
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880
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Comment: Comment: Bioinformatics career transition
11 weeks ago by jared.andrews07 ★ 17k
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278
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Comment: Comment: Pathway activity in Bulk-RNA-SEQ analysis
11 weeks ago by jared.andrews07 ★ 17k
2
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1
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880
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Answer: Answer: Bioinformatics career transition
11 weeks ago by jared.andrews07 ★ 17k
0
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0
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320
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Answer: Answer: GENERAL R QUESTION: Accessing package versions of an old R object/project?
11 weeks ago by jared.andrews07 ★ 17k
1
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0
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377
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Answer: Answer: quality control scRNAseq
11 weeks ago by jared.andrews07 ★ 17k
2
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417
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Answer: Answer: Demonstrating lack of difference between two peaksets
11 weeks ago by jared.andrews07 ★ 17k
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0
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851
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
12 weeks ago by jared.andrews07 ★ 17k
6
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6
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851
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Forum: You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical thought-experiment
12 weeks ago by jared.andrews07 ★ 17k
0
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1
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371
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Comment: Comment: DiffBind issue in identification of differentially enriched peaks between two co
12 weeks ago by jared.andrews07 ★ 17k
0
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0
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851
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
12 weeks ago by jared.andrews07 ★ 17k
1
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0
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308
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Answer: Answer: Huge TPM values in some tissues of an expression atlas
3 months ago by jared.andrews07 ★ 17k
0
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0
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503
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Comment: Comment: igvShiny issues with loading local bams
3 months ago by jared.andrews07 ★ 17k
1
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0
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503
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Comment: Comment: igvShiny issues with loading local bams
3 months ago by jared.andrews07 ★ 17k
2
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0
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449
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Answer: Answer: PCA plot analysis
3 months ago by jared.andrews07 ★ 17k
1
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0
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267
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Comment: Comment: sinto tool
3 months ago by jared.andrews07 ★ 17k
2
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1
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543
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Comment: Comment: IGV signal visualization, low and high signals
3 months ago by jared.andrews07 ★ 17k
2
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1
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266
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Answer: Answer: Sample clustering from 10X single cell
3 months ago by jared.andrews07 ★ 17k
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0
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426
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Answer: Answer: How to add motifs in cellranger-arc reference?
3 months ago by jared.andrews07 ★ 17k
1
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0
replies
289
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Answer: Answer: Pseudo bulking of scATAC-seq
3 months ago by jared.andrews07 ★ 17k
1,477 results • Page 1 of 30
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