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1,000 results • Page
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News:
Online course. -Time series analysis and Forecasting in R
Time-Series
Forecasting
R
Stastics
1 hour ago by
carlopecoraro2
★ 2.5k
795
votes
167
replies
143k
views
109 follow
News:
The Biostar Handbook. A bioinformatics e-book for beginners.
training
handbook
updated 3 months ago by
Biostar
2.7k • written 7.4 years ago by
Istvan Albert
100k
1
vote
2
replies
182
views
News:
We created a Bioinformatics Competition for Spatial Transcriptomics: MICOS-EU
cell-clustering
Spatial-transcriptomics
updated 6 hours ago by
Weiwen
• 0 • written 1 day ago by
MICOS
▴ 10
0
votes
0
replies
103
views
News:
Online course: Bioinformatic analysis of transposable elements
GenomeAssembly
Transcriptomics
TransposableElements
ManualCuration
2 days ago by
carlopecoraro2
★ 2.5k
1
vote
2
replies
1.1k
views
News:
The GDC Legacy Archive is retiring soon.
genomic-data-commons
tcga
gdc
2 days ago by
Zhenyu Zhang
★ 1.2k
0
votes
0
replies
135
views
News:
Cellosaurus release 49 is available
cell
biocuration
line
database
news
knowledgebase
4 days ago by
Amos Bairoch
▴ 120
0
votes
0
replies
106
views
News:
Beyond beginner R: Advancing your coding skills - September 16-19
Advanced-Coding
Programming
R
updated 5 days ago by
Ram
43k • written 5 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
167
views
News:
Goodbye, Slow Code? How BioNumpy can Redefine Python’s Role in Bioinformatics!
BioNumPy
Python
NumPy
updated 7 days ago by
Ram
43k • written 7 days ago by
Chakri
• 0
0
votes
0
replies
131
views
News:
Online course: Meta-analysis in R - last 2 seats left
Meta-Analysis
Statistics
R
updated 7 days ago by
Ram
43k • written 7 days ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
292
views
News:
FINAL CALL: 8th Berlin Summer School in NGS Data Analysis - Only a few last places available
DNA-seq
variant-calling
RNA-seq
illumina
transcriptomics
7 days ago by
David Langenberger
11k
0
votes
0
replies
118
views
News:
Online course: Genome Annotation
Genome-Assembly
Genome-Annotation
8 days ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
220
views
News:
Webinar “Learning Single-cell Atlases” with Dr. Fabian Theis, author of Scanpy on May 8
Scanpy
Generative-AI
scRNA
Machine-Learning
updated 10 days ago by
Ram
43k • written 11 days ago by
Claire Watson
▴ 60
0
votes
0
replies
171
views
News:
Master Meta-analysis with R (May 13-16) - Online!
Meta-Analysis
Statistics
R
updated 11 days ago by
Ram
43k • written 11 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
131
views
News:
hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models
GLM
R
updated 12 days ago by
Ram
43k • written 13 days ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
141
views
News:
Interested in Spatial Omics?
Bioconductor
Spatial-Omics
Spatial-Transcriptomics
updated 14 days ago by
Ram
43k • written 14 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
101
views
News:
Online course: DNA methylation
Pacbio
Nanopore
DnaMethylation
Evolution
15 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
146
views
News:
upcoming online statistical courses
Statistics
R
Data-Analysis
updated 16 days ago by
Ram
43k • written 16 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
211
views
News:
Online course: Meta-analysis in R
Meta-Analysis
Statistics
R
updated 19 days ago by
Ram
43k • written 19 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
192
views
News:
Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo
Individual-Based-Models
Agent-Based-Models
updated 19 days ago by
Ram
43k • written 19 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
192
views
News:
Final Call - Bioinformatics Pipeline Development with Nextflow (May 27-29, 2024)
workshop
RNA-seq
nextflow
DNA-seq
updated 21 days ago by
Ram
43k • written 21 days ago by
David Langenberger
11k
0
votes
0
replies
157
views
News:
Deadline Approaching: PETs for Public Health Challenge
privacy
public-health-challenge
updated 22 days ago by
Ram
43k • written 22 days ago by
polarise
▴ 380
0
votes
0
replies
191
views
News:
Online course: Network Analysis in R
NetworkAnalyis
R
23 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
197
views
News:
Online course: Meta-analysis in R
Meta-Analysis
R
updated 25 days ago by
Ram
43k • written 25 days ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
140
views
News:
Online Live Course: Introduction to Machine Learning in R
Rstats
TScourses
Rlang
Rproject
updated 26 days ago by
Ram
43k • written 26 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
136
views
News:
Online Course Generalised Additive Mixed Models (GAMM): modelling space-time correlation structures
GAMM
Rlang
Rstats
Rproject
updated 26 days ago by
Ram
43k • written 26 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
135
views
News:
Online Course Introduction to Network Analysis and Modelling
Python
Network-Analysis
updated 26 days ago by
Ram
43k • written 26 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
123
views
News:
Course Functional Programming with R
Rstats
TScourses
Rproject
KeepLearning
Rlang
27 days ago by
Transmitting Science communication
▴ 70
12
votes
2
replies
482
views
News:
8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop
RNA-Seq
DNA-Seq
Illumina
27 days ago by
David Langenberger
11k
2
votes
0
replies
132
views
News:
Online course: Genome Annotation
Genome-Assembly
RNA-seq
Genome-Annotation
updated 27 days ago by
Ram
43k • written 27 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
131
views
News:
Online course: Multivariate Data Analysis with R and vegan
Multivariate-Statistics
vegan
R
updated 28 days ago by
Ram
43k • written 29 days ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
189
views
News:
Landscape Genomics course in Switzerland
LFMM
Landscape-Genomics
Sambada
R
Local-Adaptation
5 days ago by
carlopecoraro2
★ 2.5k
8
votes
2
replies
820
views
News:
FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell
sequencing
4 weeks ago by
David Langenberger
11k
0
votes
0
replies
158
views
News:
Online course: Food Traceability Using Genomic Tools
Nanopore
Genomic-Tools
Illumina
Food-Traceability
updated 4 weeks ago by
Ram
43k • written 4 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
158
views
News:
Online course: Eukaryotic Metabarcoding
Metabarcoding
Biodiversity
R
eDNA
5 weeks ago by
carlopecoraro2
★ 2.5k
3
votes
2
replies
612
views
News:
Announcement: Research Topic "Mechanistic, Machine Learning and Hybrid Models of the 'Other' Endocrine Regulatory Systems in Health and Disease", Vol…
mathematical-modelling
endocrinology
ML
systems-biology
machine-learning
5 weeks ago by
Johannes W. Dietrich
• 0
0
votes
0
replies
220
views
News:
Online course: Reproducibility in Bioinformatics
Singularity
Version-Control
Docker
Containers
updated 5 weeks ago by
Ram
43k • written 5 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
182
views
News:
Online course: Analysis of Prokaryotic Pangenomes (Last call)
Prokaryotic
Bacterial-Genomics
Pangenomics
updated 5 weeks ago by
Ram
43k • written 5 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
176
views
News:
Online course: Introduction to GWAS
GWAS
Imputation
StatisticalPower
6 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
171
views
News:
Online course: Adaptation Genomics
StructuralVariants
Selection
AdaptationGenomics
PopulationStructure
7 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
162
views
News:
Online course: Analysis of Prokaryotic Pangenomes
BacterialGenomics
Pangenomics
7 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
240
views
News:
Online course on Genome Assembly and Annotation (1 seat left)
Galaxy
GenomeAssembly
GenomeAnnotation
7 weeks ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
180
views
News:
NCBI's ClinVar now accepting somatic variation data
variation
NCBI
somatic-variants
ClinVar
7 weeks ago by
PeterC_NCBI
▴ 410
1
vote
1
reply
283
views
News:
EMBL Course Hands-on course for sample preparation and data analysis in proteomics
EMBLProteomics
updated 7 weeks ago by
dr.eldeib89
• 0 • written 3 months ago by
EMBL Events
▴ 10
1
vote
0
replies
210
views
News:
Learn how to create robust bioinformatics pipelines for reproducible and comparable NGS analyses
nextflow
pipeline
workshop
8 weeks ago by
David Langenberger
11k
0
votes
0
replies
162
views
News:
Online course: Genome Assembly and Annotation - 3 seats left
Genome-Assembly
Galaxy
Genome-Annotation
updated 8 weeks ago by
Ram
43k • written 8 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
165
views
News:
Call for abstract: Quest for Orthologs meeting in Montreal
conference
phylogeny
comparativegenomics
orthology
evolution
8 weeks ago by
sina.majidian
▴ 20
1
vote
0
replies
166
views
News:
shournal: A Tool for Bioinformaticians to Boost Research Reproducibility
reproducability
terminal
bash
9 weeks ago by
David Langenberger
11k
1
vote
1
reply
211
views
News:
Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser
IGB
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
IGB Helper
• 0
0
votes
0
replies
199
views
News:
Online course: Network Analysis in Systems Biology with R/Bioconductor
R
RNA-seq
Network-Analysis
Bioconductor
Systems-Biology
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
230
views
News:
The 2024 Canadian Bioinformatics Workshops are here!
CBW
workshop
training
9 weeks ago by
bioinformatics.ca
• 0
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Recent Votes
Comment: Help with running egsea()
How Can I Interpret A Multiple Sequence Alignment?
Comment: Gene density plot
A: Regarding Split reads and discordant reads
Comment: student
Comment: Repeated testing/data mining in RNA Seq
Comment: UMI-Tools knee-method has great influence on the results of white list
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Comment: Help with running egsea()
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1769mkc
★ 1.2k
please provide the design matrix mean the metadata of the model fit2 which is there in the code . i guess other users can help
Comment: Applying the metacell2 algorithm using python
by
JACKY
▴ 140
The repo does not provide any valuable information unfortunately. The Metacell algorithm they provide in the vignette is missing the metagr…
Comment: Repeated testing/data mining in RNA Seq
by
robert.flynn.21
• 0
Thanks! I'll give it a go.
Comment: Applying the metacell2 algorithm using python
by
Wayne
★ 2.0k
Yes, they are very clear about this. The page about the Vignettes says: >"They are not meant as a comprehensive documentation of all the fe…
Comment: Gene density plot
by
dthorbur
★ 1.9k
This sounds like it would be a simple task in either python or R. Read data in, potentially with a library like `data.table` in `R`, depend…
Answer: HLA-HD tool for genomic imputation
by
Javier
• 0
Hi, I just solved the same error. In my case, it was because I misunderstood the instructions. hlahd.sh -t 4 *-f ~/hlahd.1.7.0/fr…
Comment: Question regarding WGCNA
by
andres.firrincieli
3.6k
Ok, then. You likely have a scale free topology that look like this: [link][1] In this situation you should pick the power value with an …
Comment: Bioinformatics Analyst - Laboratory Medicine and Pathology
by
Ram
43k
Why did you add this as an answer to a random post? I'm moving this to a comment. To answer your question, read this post: https://www.bio…
Comment: ERROR: Duplicate entry "..." in sam header; samtools view: failed to add PG lin
by
GenoMax
142k
> I don't understand why SAM header has "Duplicate entry" and what should I do in this case. Your reference sequence must have fasta head…
Comment: UMI-Tools knee-method has great influence on the results of white list
by
i.sudbery
19k
I can't immediately see anything wrong. The log file should contain lines saying how many reads were parsed, how many reads matched the bar…
Comment: UMI-Tools knee-method has great influence on the results of white list
by
Assa Yeroslaviz
★ 1.8k
Thank you for the explanation. I can see the plots look strange, but i truly don't know why this is. I have a feeling that the sequencing …
Comment: High Malat-1 expression in single cell data
by
dsull
★ 6.0k
No -- those are ribosomal proteins, not rRNAs.
Comment: trying to count a pattern in my fastq file using bbduk
by
GenoMax
142k
Thanks for that link. As noted in that example, you can try `seal.sh` instead of `bbduk.sh`. > Is it possible, that this pattern is just …
Comment: Question regarding WGCNA
by
deepak
• 0
These are independent biological replicates
Comment: UMI-Tools knee-method has great influence on the results of white list
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i.sudbery
19k
I didn't mean to sound like I was taking it as a criticism, I genuinely meant that we never intended to be a foolproof whitelisting tool. T…
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