Selecting targets from Bioproject to Blast Into

Question

[lowensteinpedro]

How do you select 100 or 500 SRA links from a bioproject to BLAST into? It is easy to just select 1 or 2.

Answer 1

[DCGenomics]

Hello! There is a limit on how many SRA records one can BLAST into on our servers. Functionally, its a few say 3-4 mouse or human SRA runs. To do larger searches, you would want to use the command line interface provided with the toolkit.

Answer 2

[lowensteinpedro]

Thank you very much