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News: The Biostar Handbook. A bioinformatics e-book for beginners.

tutorial news training handbook written 2.3 years ago by Istvan Albert ♦♦ 79k • updated 2 hours ago by Glory Basumata • 10

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News: Phylogenomics course in Berlin

news next-gen snp written 7 hours ago by carlopecoraro2 • 910

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News: Join a private beta of new RNA-seq data analysis app

news beta testing rna-seq written 10 hours ago by polina99 • 0 • updated 8 hours ago by genomax ♦ 63k

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News: Course on Molecular Phylogeny in Poland (15-18 July 2019)

phylogeny R news barcoding molecularecology written 2 days ago by carlopecoraro2 • 910

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News: Training in Molecular Modeling and Molecular Dynamics @NIH,May 21-24,2019

modeling news training rna-seq dynamics biology written 4 days ago by AABI • 120

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Forum: biostar.slack.com: Chat for the biostars community

chat news forum written 12 months ago by Devon Ryan ♦ 88k • updated 4 days ago by ATpoint ♦ 14k

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News: Speciation Genomics course in Canada this September

genome R news snp written 5 days ago by carlopecoraro2 • 910

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News: Beyond pest control: What can we learn from parasites?

in silico news parasitism heme docking written 6 days ago by Michael Dondrup ♦ 45k

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News: OmicsLogic Online Bioinformatics Program (March 2019) has started

genome news next-gen rna-seq written 5 days ago by elia.brodsky • 300

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News: Bioinformatics PhD Programs in the US

news phd education written 15 months ago by Ahmed Youssef • 30

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News: 7th Annual Mendelian Data Analysis Workshop - Learn bioinformatic tools for analysis of exome and genome sequence data for rare diseases.

genome next-gen news sequence analysis written 11 days ago by mpmacmil • 10

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News: Gen3 DCF Services Webinar - Authentication, Authorization and Indexing

news gen3 webinar written 12 days ago by ppandey • 10

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News: Workshop for genomic data visualization and interpretation

R news ggplot2 rna-seq genomics written 12 weeks ago by Malachi Griffith ♦ 17k

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News: Genomic Data Visualization course

R bioconductor visualization news written 14 days ago by carlopecoraro2 • 910

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News: Bioinformatic Analysis of Next Generation Sequencing Data @NIH

next-gen news training analysis rna-seq bioinformatics written 16 days ago by AABI • 120

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News: BSB Forum (Bioinformatics & Systems Biology Collaborative Projects)

bioinformatics news systems_biology written 16 days ago by Adrian (Abbas) • 0 • updated 16 days ago by genomax ♦ 63k

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News: Programming in R

R news programming written 18 days ago by carlopecoraro2 • 910

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News: Bioinformatics internships with Google Summer of Code 2019

ensembl intern gsoc news written 19 days ago by Emily_Ensembl ♦ 17k

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News: Check out precision FDA's Featured Expert Blog from Dr. Charles Eaton

news crowdsourcing dupytrens genetic biomarker written 20 days ago by sarah01122009 • 60

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News: BUILDING A PIPELINE FOR GENOME-WIDE ASSOCIATION STUDIES

gwas news written 20 days ago by carlopecoraro2 • 910

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News: Interested in Genomic Data Visualization?

R news next-gen rna-seq written 20 days ago by carlopecoraro2 • 910

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News: Results are now available for the precisionFDA CDRH Biothreat Challenge!

ngs metagenomics news fda biothreat written 5 weeks ago by sarah01122009 • 60 • updated 21 days ago by Jonathanjacobs • 210

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News: Applied Statistics and Bioinformatics with R and Bioconductor

R bioconductor next-gen news written 23 days ago by carlopecoraro2 • 910

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News: Programming for Biomedical Researchers @NIH, USA, April 23-26,2019

bioinformatics researchers news program biomedical written 27 days ago by AABI • 120

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News: 16S Microbial Metabarcoding Workshop. Last 4 spots available

metabarcoding news written 27 days ago by carlopecoraro2 • 910

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107

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News: Gene set enrichment and pathway analysis in HT data

news next-gen rna-seq sequencing written 4 weeks ago by carlopecoraro2 • 910 • updated 4 weeks ago by kieran-lievel • 0

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News: 16S/ ITS Metabarcoding course using QIIME2 platform

metabarcoding news written 4 weeks ago by carlopecoraro2 • 910

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News: Integrative Genomic Viewer (IGV) works with Amazon S3

news amazon igv written 4 weeks ago by Roman Valls Guimerà • 510

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News: Results are now available for the precisionFDA NCI-CPTAC Multi-omics Enabled Sample Mislabeling Correction Challenge!

news challenge algorithm multi-omics precisionfda nci written 4 weeks ago by sarah01122009 • 60

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News: Training in Variant Analysis @NIH, USA, April 16-19,2019

#phenotype #biomedical news #genotype written 4 weeks ago by AABI • 120

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Recent Replies

C: An error message while installing gromacs on windows 10 (Linux bash shell, ubunt by DS • 0
Thank you for your answer. I successfully installed but I couldn't execute it. Could you hel...
C: How to analyze RNAseq data with two/multiple treatment groups and each subject h by Kevin Blighe ♦ 39k
Cool. The model may then simply be `~ PatientID + treatment`. This model is then effectively a pa...
A: RNAseq sample never as A in last base by swbarnes2 ♦ 4.9k
I noticed that before, but not with RNAseq. It was a kind of artificial set up, where the sequen...
C: RMBlast install error by xhfeng0307 • 0
Thanks for your answer, I will try anaconda.
C: Ensembl Biomart : One Ensembl transcript ID for several UniprotKB ID by genomax ♦ 63k
This gene has [multiple transcripts][1] and Uniprot seems to assign them with unique ID's. @Emi...
A: Merge vcf files with multiple samples into one vcf with all variants by Renesh • 1.5k
Check this link if you want to merge multiple vcf files https://reneshbedre.github.io/blog/mergev...
A: How to merge vcf files with different variants but same samples? by Renesh • 1.5k
Check this link to merge vcf files https://reneshbedre.github.io/blog/mergevcf.html
C: RNAseq sample never as A in last base by genomax ♦ 63k
If you do a google image search with `fastqc per base sequence content` you will see examples of ...
A: Searching for a sequence within another sequence Biopython by jrj.healey ♦ 11k
Here's one approach. It's a little hacky, and going back to the original sequence to find the ind...
C: How to analyze RNAseq data with two/multiple treatment groups and each subject h by wwu222 • 0
Hi Kevin, really appreciate your suggestion! I will try it out. Thank you very much!
C: Converting a VCF with SNPs and indels to BED format by jeb247 • 10
Please try removing the leading "$" from: $ cut -f1-5 foo_snvs.bed | awk -v FS="\t" -v OFS=...
C: Finding the best model for expression data (RNA-Seq counts) by Charles Warden ♦ 6.4k
Yes - I believe the rlog is mostly similar to log2(FPKM+0.1) values. So, it is more like the log...

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