Moderator: genomax

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genomax68k
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Posts by genomax

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Comment: C: Removing homozygous reference genotypes from multi-sample vcf file
... > Our admin must install Pierre's tool on the cluster to test it As long as you have java installed on the cluster you should be able to run Pierre's program from your own directory. ...
written 12 hours ago by genomax68k
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Answer: A: Mapping exonic sequences across species
... MGI has already done this for human/mouse. Take a [look here][1]. [NCBI Homologene][2]/[Ensembl Compara][3] have multiple gene/genome comparisons available. BTW nothing wrong staying old fashioned. Most of us are still routinely using blast and doing sequencing by DNA synthesis. [1]: http://w ...
written 13 hours ago by genomax68k
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Comment: C: PhD: Research interest or better program?
... > Would it be wiser to use this opportunity to make a big transition to > human biology? Yes. But that is a general answer since human health is always going to have plenty of research support/interest. I would not worry about job in academia or industry at this time since you are at least ...
written 13 hours ago by genomax68k
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Comment: C: Issue wiht pseudogenes in bacteria genome
... See @h.mon's answer in this thread: https://www.biostars.org/p/334870/ ...
written 13 hours ago by genomax68k
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Comment: C: DeSeq2 error correction and experiment design
... Please use `ADD REPLY/ADD COMMENT` when responding to existing posts to keep threads logically organized. `Submit Answer` is only for new answers to the original question. ...
written 1 day ago by genomax68k
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Comment: C: Advice for first PCR analyst role (Cheese factory)
... http://www.protocol-online.org/forums/forum/43-pcr-rt-pcr-and-real-time-pcr/ looks promising. Not chat though. ...
written 1 day ago by genomax68k
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Comment: C: Keeping only matching reads in fastq files
... Does that keep only those reads that are common to both files? Did you post process the results to only keep those reads from both files that were a `hit`? ...
written 1 day ago by genomax68k
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Comment: C: bowtie - ebtw human index
... Have you checked the premade indexes [available here][1]? [1]: http://bowtie-bio.sourceforge.net/index.shtml ...
written 1 day ago by genomax68k
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Comment: C: Where can I find the ATC codes for all drugs (approved or withdrawn)?
... Save that file to you local desktop. Go to https://translate.google.com. Choose `Documents` option next to text and upload your pdf file. Get your translation. ...
written 1 day ago by genomax68k
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Comment: C: ensembl mysql servers and helpdesk non-responsive. Is it me?
... $ mysql --user=anonymous --host=ensembldb.ensembl.org -D homo_sapiens_core_90_38 -e 'show tables' Is working for me. ...
written 2 days ago by genomax68k

Latest awards to genomax

Good Answer 2 days ago, created an answer that was upvoted at least 5 times. For A: Concatenating fastq.gz files across lanes
Scholar 3 days ago, created an answer that has been accepted. For A: Ensembl gene annotation GRCh37.87
Teacher 5 days ago, created an answer with at least 3 up-votes. For C: pulling out a single pseudochromosome from my vcf file
Commentator 6 days ago, created a comment with at least 3 up-votes. For C: How to assign the result of a command to a variable in shell script?
Commentator 6 days ago, created a comment with at least 3 up-votes. For C: How to assign the result of a command to a variable in shell script?
Teacher 9 days ago, created an answer with at least 3 up-votes. For C: pulling out a single pseudochromosome from my vcf file
Scholar 9 days ago, created an answer that has been accepted. For A: Ensembl gene annotation GRCh37.87
Commentator 9 days ago, created a comment with at least 3 up-votes. For C: How to assign the result of a command to a variable in shell script?
Teacher 10 days ago, created an answer with at least 3 up-votes. For C: pulling out a single pseudochromosome from my vcf file
Scholar 11 days ago, created an answer that has been accepted. For A: Ensembl gene annotation GRCh37.87
Teacher 17 days ago, created an answer with at least 3 up-votes. For A: Ensembl gene annotation GRCh37.87
Commentator 17 days ago, created a comment with at least 3 up-votes. For C: Google genomics cloud platform ?
Scholar 17 days ago, created an answer that has been accepted. For A: Ensembl gene annotation GRCh37.87
Commentator 18 days ago, created a comment with at least 3 up-votes. For C: How to assign the result of a command to a variable in shell script?
Teacher 19 days ago, created an answer with at least 3 up-votes. For A: Ensembl gene annotation GRCh37.87
Scholar 19 days ago, created an answer that has been accepted. For A: Ensembl gene annotation GRCh37.87
Teacher 24 days ago, created an answer with at least 3 up-votes. For A: Ensembl gene annotation GRCh37.87
Scholar 24 days ago, created an answer that has been accepted. For A: Ensembl gene annotation GRCh37.87
Commentator 24 days ago, created a comment with at least 3 up-votes. For C: How to assign the result of a command to a variable in shell script?
Teacher 26 days ago, created an answer with at least 3 up-votes. For A: Ensembl gene annotation GRCh37.87
Good Answer 26 days ago, created an answer that was upvoted at least 5 times. For A: Concatenating fastq.gz files across lanes
Appreciated 26 days ago, created a post with more than 5 votes. For Inviting NEW Biostars moderators to join Biostars slack channel
Teacher 4 weeks ago, created an answer with at least 3 up-votes. For A: Ensembl gene annotation GRCh37.87
Teacher 4 weeks ago, created an answer with at least 3 up-votes. For A: Ensembl gene annotation GRCh37.87
Scholar 4 weeks ago, created an answer that has been accepted. For A: Ensembl gene annotation GRCh37.87

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