Moderator: genomax
genomax ♦ 31k
- Reputation:
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Posts by genomax
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1
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3
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94
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... +1 for creativity. Using BBMap solution may be easier for a giant file. ...
written 1 hour ago by
genomax ♦ 31k
1
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2
answers
82
views
2
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... I edited the title of this post so it is easy to find it in future by others. ...
written 1 hour ago by
genomax ♦ 31k
0
votes
3
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94
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3
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... `reformat.sh` from [BBMap Suite][1] used like this: `reformat.sh in=your.fq ihist=filename_you_want.txt`
[1]: https://sourceforge.net/projects/bbmap/ ...
written 1 hour ago by
genomax ♦ 31k
4
votes
1
answer
127
views
1
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... That order of answers would seem to indicate that you are not specifically interested in cancer research. Should your answer not include something directly relevant to cancer research as your first reason. ...
written 3 hours ago by
genomax ♦ 31k
0
votes
1
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101
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... Please use `ADD COMMENT/ADD REPLY` when responding to existing posts to keep threads logically organized.
...
written 4 hours ago by
genomax ♦ 31k
0
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3
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612
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3
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Comment:
C: RNAseq problems with tophat
... If this error is from PSU Galaxy then consider posting this over at [Galaxy Biostars][1].
[1]: https://biostar.usegalaxy.org/ ...
written 4 hours ago by
genomax ♦ 31k
1
vote
1
answer
101
views
1
answers
... Supplementary answer in addition to this: https://support.bioconductor.org/p/61531/ ...
written 5 hours ago by
genomax ♦ 31k
0
votes
1
answer
101
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1
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... See: https://www.biostars.org/p/173178/ and https://www.biostars.org/p/119778/ ...
written 5 hours ago by
genomax ♦ 31k
0
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0
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67
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0
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Comment:
C: TCGA RNAseq files
... It would be useful to add where exactly you downloaded this data from (since there are multiple sources to get TCGA data). ...
written 5 hours ago by
genomax ♦ 31k
1
vote
1
answer
91
views
1
answers
... If you are using Qiime accessory programs/following their workflow don't modify/mess with any of the output files. It may break the workflow. ...
written 8 hours ago by
genomax ♦ 31k
Latest awards to genomax
Commentator
2 hours ago,
created a comment with at least 3 up-votes.
For C: Removing PCR duplicates - fastq or BAM?
Appreciated
3 days ago,
created a post with more than 5 votes.
For C: website to buy and sell genomic data
Teacher
3 days ago,
created an answer with at least 3 up-votes.
For A: which one is adapter and which one is index
Commentator
4 days ago,
created a comment with at least 3 up-votes.
For C: Removing PCR duplicates - fastq or BAM?
Commentator
5 days ago,
created a comment with at least 3 up-votes.
For C: Removing PCR duplicates - fastq or BAM?
Good Answer
6 days ago,
created an answer that was upvoted at least 5 times.
For A: How the level 3 TCGA raw counts are calculated for each sample?
Appreciated
6 days ago,
created a post with more than 5 votes.
For C: website to buy and sell genomic data
Teacher
6 days ago,
created an answer with at least 3 up-votes.
For A: which one is adapter and which one is index
Scholar
6 days ago,
created an answer that has been accepted.
For A: which one is adapter and which one is index
Teacher
9 days ago,
created an answer with at least 3 up-votes.
For A: which one is adapter and which one is index
Scholar
9 days ago,
created an answer that has been accepted.
For A: which one is adapter and which one is index
Appreciated
11 days ago,
created a post with more than 5 votes.
For C: website to buy and sell genomic data
Commentator
13 days ago,
created a comment with at least 3 up-votes.
For C: The Biostar Handbook, a bioinformatics e-book for beginners
Scholar
13 days ago,
created an answer that has been accepted.
For C: Suggestions on Sharing VERY LARGE files?
Teacher
14 days ago,
created an answer with at least 3 up-votes.
For C: website to buy and sell genomic data
Appreciated
20 days ago,
created a post with more than 5 votes.
For C: website to buy and sell genomic data
Teacher
21 days ago,
created an answer with at least 3 up-votes.
For A: How do you cite a tool that doesn't have a publication?
Appreciated
23 days ago,
created a post with more than 5 votes.
For C: The Biostar Handbook, a bioinformatics e-book for beginners
Teacher
23 days ago,
created an answer with at least 3 up-votes.
For A: How do you cite a tool that doesn't have a publication?
Good Answer
23 days ago,
created an answer that was upvoted at least 5 times.
For A: How the level 3 TCGA raw counts are calculated for each sample?
Teacher
23 days ago,
created an answer with at least 3 up-votes.
For A: How do you cite a tool that doesn't have a publication?
Commentator
24 days ago,
created a comment with at least 3 up-votes.
For C: The Biostar Handbook, a bioinformatics e-book for beginners
Scholar
4 weeks ago,
created an answer that has been accepted.
For C: Suggestions on Sharing VERY LARGE files?
Teacher
4 weeks ago,
created an answer with at least 3 up-votes.
For A: How do you cite a tool that doesn't have a publication?
Good Answer
4 weeks ago,
created an answer that was upvoted at least 5 times.
For A: How the level 3 TCGA raw counts are calculated for each sample?
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