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113
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Job: BIOINFORMATICIAN II
RNA-seq Genomics Job Transcriptomics
2 days ago by lianov ▴ 10
1
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97
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Job: ELIXIR Technical Officer (bioinformatician/data scientist) at EMBL-EBI
standards EMBL-EBI data bioinformatician
3 days ago by Erin Haskell | ELIXIR ▴ 460
0
votes
0
replies
69
views
Job: Two PhD scholarships in Transporter Protein Engineering at DTU Biosustain
Yeast Engineering biology molecular Metabolic omic
3 days ago by info ▴ 70
1
vote
1
reply
181
views
Job: Bioinformatics Scientist
pharmaceuticals Bioinfo scientist
updated 3 days ago by 34k • written 3 days ago by ▴ 10
0
votes
0
replies
70
views
Job: Post-doctoral position in bioinformatics for the analysis of enzyme families from metagenomic data, Evry, France
enzyme functional annotation bioinformatics postdoc metagenomic
4 days ago by vallenet • 0
0
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0
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21
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Job: Post-doctoral position in bioinformatics for the analysis of enzyme families from metagenomic data, Evry, France
enzyme functional annotation bioinformatics postdoc metagenomic
4 days ago by vallenet • 0
0
votes
0
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73
views
Job: Program Manager - Computational Biology
Manager Computational Biology
4 days ago by BerkeleyLab ▴ 40
0
votes
0
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58
views
Job: Senior Research Associate (Lab Operations)
Operations Research Lab
4 days ago by BerkeleyLab ▴ 40
0
votes
1
reply
115
views
Job: Postdoctoral fellow -- Bioinformatics/Genetics/Epidemiology
Genetics Bioinformatics Biostatistics Epidemiology
6 days ago by zwangmanu ▴ 10
0
votes
0
replies
152
views
Job: Research Scientist- Bioinformatics & Computational Biology
bioinformatics leaning machine
8 days ago by Dong • 0
0
votes
0
replies
109
views
Job: Bioinformatics position at the spatial transcriptomics facility of Lyon (France)
cell bioinfomatics analysis spatial single job transcriptomics
9 days ago by yad.ghavi-helm • 0
0
votes
0
replies
151
views
Job: PhD student for a computational breast cancer research project
Bioinformatics PhD Cancer Omics
10 days ago by s.vosberg • 0
0
votes
0
replies
113
views
Job: Postdoctoral Scientist in Statistical Bioinformatics and Software Development, WEHI, Melbourne, Australia
Australia
10 days ago by Gordon Smyth ★ 3.3k
2
votes
0
replies
147
views
Job: 20 Fully funded PhD studentships in Quantitative Biology in Lausanne, Switzerland
phd fellowship studentship job
10 days ago by Christophe Dessimoz ▴ 710
0
votes
0
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232
views
Job: Senior Bioinformatician at AstraZeneca - Biology/Chemistry Interface and Proteomics Research (Cambridge, UK)
discovery drug bioinformatics omics AstraZeneca
4 days ago by Sergio Martínez Cuesta ▴ 180
0
votes
0
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339
views
Job: We are looking for bioinformaticians for collaboration
startup bioinformaticians job
9 days ago by Anastasiya M • 0
1
vote
0
replies
221
views
Job: BIOINFORMATICS PROGRAMMER
PROGRAMMER BIOINFORMATICS
15 days ago by ads ▴ 10
0
votes
0
replies
199
views
Job: Bioinformatics Engineer, Molecular Diagnostics Labs, UCLA Health
scientist clinical variant bioinformatician engineer
5 days ago by Cyriac Kandoth 5.7k
1
vote
0
replies
231
views
Job: Hiring: Computational Biology/Bioinformatics at Chinook Therapeutics (Seattle, Vancouver or Remote)
Bioinformatics RNASeq Genomics Computational_Biology
19 days ago by eolson ▴ 10
0
votes
0
replies
503
views
Job: PostDoc computational biology/bioinformatics (m/f/d) (fulltime, 5 year tempory appointment), Berlin, Germany
Regulatory_Elements Machine_Learning Variant_Effects Computational_Biology Bioinformatics
19 days ago by martin.kircher • 0
0
votes
0
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120
views
Job: Scientific Software Developer / Research Software Engineer for NFDI4Microbiota (Cologne, Germany)
NFDI4Microbiota Development Web NFDI
22 days ago by Konrad ▴ 690
2
votes
3
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716
views
Job: Open Position- Bioinformatician/biologist with experience in multi-omics data analysis
Dataanalysis BigData Multi-omics NGS
updated 16 days ago by ▴ 180 • written 22 days ago by • 0
0
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0
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115
views
Job: HIRING: Data Brokers and Data Broker Supervisor at UCSC
genomics bioinformatics UC data DNA
22 days ago by genomicshr ▴ 30
0
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0
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147
views
Job: HIRING: Bioinformatician and Sr. Bioinformatician at UC Santa Cruz
health genomic bioinformatics UC pathogen
23 days ago by genomicshr ▴ 30
0
votes
0
replies
139
views
Job: Open Position - Postdoctoral Researcher in the Bioinformatics Core at Purdue University
Researcher Core USA Postdoctoral Purdue Bioinformatics Midwest
24 days ago by xie186 ▴ 10
0
votes
0
replies
298
views
Job: 11 funded PhD positions IRTG 2403 "Dissecting and Reengineering the Regulatory Genome", Humboldt-Universität zu Berlin, Germany
Machine_Learning Genomics Computational_Biology Bioinformatics Gene_Regulation
24 days ago by martin.kircher • 0
0
votes
0
replies
483
views
Job: Graduate/PhD Student Computational Biology/Bioinformatics, Berlin Institute of Health, Germany
Regulatory_Elements Machine_Learning Variant_Effects Computational_Biology Bioinformatics
24 days ago by martin.kircher • 0
0
votes
0
replies
168
views
Job: Computational Graduate Student
Computer Chemistry Physics Science
25 days ago by BerkeleyLab ▴ 40
0
votes
1
reply
178
views
Job: Computational Project Scientist
Molecular Biophys Integ Bio
updated 25 days ago by 34k • written 25 days ago by ▴ 40
0
votes
0
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181
views
Job: Computational Postdoctoral Scholar
Molecular Biophys Integ Bio
25 days ago by BerkeleyLab ▴ 40
0
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0
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191
views
Job: Postdoctoral Scientist in Statistical Bioinformatics, WEHI, Melbourne, Australia
australia
28 days ago by Gordon Smyth ★ 3.3k
0
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0
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152
views
Job: Assistant Professor (tenure-track) and Professor positions in Data Science
faculty datascience statistics job bioinformatic
29 days ago by aaistaustria ▴ 10
0
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0
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179
views
Job: Jr and Sr bioinformatician profiles for immunotherapy design in cancer patients (BELGIUM)
neoantigen job belgium
29 days ago by cedric.bogaert • 0
0
votes
0
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184
views
Job: Postdoc at Stanford working on mobile health device data from My Heart Counts
ai science device mhealth data
4 weeks ago by hershman ▴ 40
0
votes
0
replies
143
views
Job: Science Infrastructure Manager
management infrastructure project Science
4 weeks ago by EMBL Recruitment ▴ 30
1
vote
0
replies
276
views
Job: Bioinformatician — Biological data and network analysis
analysis Bioinformatitics Data network Biological
4 weeks ago by EMBL Recruitment ▴ 30
1
vote
0
replies
288
views
Job: Genomics Data Scientist
Data Genomics Scientist
5 weeks ago by BerkeleyLab ▴ 40
0
votes
0
replies
213
views
Job: Staff Data Scientist
date Scientist
5 weeks ago by BerkeleyLab ▴ 40
0
votes
0
replies
203
views
Job: Bioinformatician at Max Planck Institute for plant breeding research (Cologne, Germany)
bioinformatician job
5 weeks ago by microfuge ★ 1.9k
0
votes
0
replies
147
views
Job: Post-doctoral Fellowship in Diabetes, Harvard Medical School
bioinformatics postdoc ChIP-seq single-cell
5 weeks ago by Sudha • 0
0
votes
0
replies
151
views
Job: Scientific Officer: Human genomics and translational data (ELIXIR/EMBL-EBI, Cambridge, UK)
bioinformatics human genomics
5 weeks ago by Erin Haskell | ELIXIR ▴ 460
0
votes
0
replies
154
views
Job: Programme Manager: Human genomics and translational data (ELIXIR/EMBL-EBI, Cambridge, UK)
Cambridge human EBI genomics
5 weeks ago by Erin Haskell | ELIXIR ▴ 460
0
votes
0
replies
138
views
Job: Data Stewardship Community Manager
Management Data Community engagement
5 weeks ago by Hannah • 0
0
votes
0
replies
147
views
Job: Postdoc position in phylogenomics and evolution of beetles
evolution bioinformatics genomics beetles
5 weeks ago by zyladagmara • 0
0
votes
0
replies
265
views
Job: Multiple data scientist positions in computational biomedicine
biomedicine data-science machine-learning
5 weeks ago by pandey.gaurav ▴ 130
0
votes
1
reply
181
views
Job: Community Engagement Scientist
bioinformatics bioimaging community neuroimaging
updated 5 weeks ago by 34k • written 5 weeks ago by • 0
0
votes
0
replies
558
views
Job: Bioinformatician/Computational Biologist. Single cell genomics of primate brain to design cell-type-targeted viral vectors. 2 positions, Basel Switze…
single-cell epigenomics AAV brain job
5 weeks ago by cameron.cowan • 0
0
votes
0
replies
291
views
Job: JOB OPPORTUNITY!!! Scientist, Next Generation Sequencing (Molecular Biology)
hiring jobs careers NGS
5 weeks ago by jkurtz • 0
0
votes
0
replies
150
views
Job: Staff Scientist and Engineering positions at Scripps Research (San Diego CA or remote)
visualization infectious open diseases bioinformatics data
5 weeks ago by Laura • 0
0
votes
0
replies
134
views
Job: PDRA in Computational Biophysics and Cancer Research, University of Manchester, UK
Bioinformatics StructuralGenomics Cancer pH-dependence
5 weeks ago by jim.warwicker • 0
1,000 results • Page 1 of 20
Recent Votes
installing samtools with conda - overcoming two common errors
Answer: Database for Enhancers with Coordinates
Answer: Database for Enhancers with Coordinates
Answer: Database for Enhancers with Coordinates
Answer: Database for Enhancers with Coordinates
Answer: How can I extract upstream regions in fasta for all blastx hits locally performe
Interpretation of Overlapping p-value = 0 and Odss ratio = Inf
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Popular Question to Shicheng Guo ★ 8.8k
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Recent Replies
Comment: How to pipe awk of bed file into samtools to extract fasta sequences? by alex.zaccaron ▴ 260
Piping to `bedtools` would be more straightforward: ``` awk 'OFS="\t" {if($2<100) print $1,"0",$2; else print $1, $2-100, $2}' seq.bed | \…
Comment: clusterProfiler won't read gene list by theodore.killian ▴ 20
Correct. I realized that my data was for mouse. The clusterProfiler vignette does not make it abundantly clear that it is only for human.
Comment: How can I extract upstream regions in fasta for all blastx hits locally performe by mrj ▴ 50
Thank you. This worked for me
Comment: Forge a BSgenome data package by xiaoleiusc ▴ 70
In the seed file (a txt file in the seq_srcdir folder),the seq_scrdir should be a directory and not a tar.gz file, in the above example, th…
Answer: How to download all the genome fasta file for plants? by vkkodali ★ 2.7k
[NCBI Datasets](https://www.ncbi.nlm.nih.gov/datasets/) is specifically designed for this use-case. You can either use the web interface to…
Comment: 23andme file format by Ahmadreza • 0
What if the variant is a deletion or insertion, particularly of more than a nucleotide? How could you differentiate an insertion of -/TT …
Comment: Dealing with P value inflation of SNPs identified by qqplot by stephen.johnson.online • 0
Thanks for your suggestion. I ran a fishers exact test with Popoolation2 and then calculated the expected p values for a uniform distributi…
Comment: How to download all the genome fasta file for plants? by a.zielezinski 9.8k
You can use: https://github.com/kblin/ncbi-genome-download
Comment: converting Bam to fastq while removing clipping(hard/soft clip bases) by GenoMax 106k
Hard clipped bases are not in the BAM file. As for soft-clipped reads use the answers here: https://www.biostars.org/p/84452/
Comment: Network plot using NetCoMi and igraph by andres.firrincieli ★ 1.7k
It has been a while since I used NetCoMi but in the function `plot` try adding the following arguments: `repulsion = 0.84` and `highlightHu…
Comment: Loading a genome in BSgenome by xiaoleiusc ▴ 70
I have the same problem, in this case, we need to forge a custom BSgenome (https://www.bioconductor.org/packages/devel/bioc/vignettes/BSgen…
Comment: easy way to fetch out the surrounding CDS of a pair of given coordinates by zhangdengwei ▴ 150
I finally succumb to coding by myself. The `biopython` module and `pandas` package can be helpful when doing such a thing.
Answer: How can I extract upstream regions in fasta for all blastx hits locally performe by shenwei356 6.1k
saving in outfmt6, converting to gtf/bed, and getting upstream sequences with bedtools or bedops.
Comment: (ERR): bowtie2-align died with signal 24 (XCPU) (core dumped) by gglim ▴ 100
[this post][1] may help [1]: https://www.biostars.org/p/292307/
Answer: Ensembl VEP Plugin not working by brunobsouzaa ▴ 560
So, I've found the issue. Plugin will not work if you have `ID` and `FILTER` values empty, even if using `filter=0`. So I had to run `GATK …
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