User: ashaneev07

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ashaneev0720
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Posts by ashaneev07

<prev • 98 results • page 1 of 10 • next >
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Comment: C: EvidenceModeler # Error, cannot write
... hmm... i've even run with augustus result only but that shows the same error. Is there any problem with augustus file? here is the file. scf7180000642636 AUGUSTUS CDS 1880 1995 0.36 + 2 ID=g1.t1.cds;Parent=g1.t1 scf7180000642636 AUGUSTUS exon 1880 2262 . + . Parent=g1.t1 scf718000064 ...
written 4 months ago by ashaneev0720
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Comment: C: EvidenceModeler # Error, cannot write
... disc has more than1 tb available. The following command was used perl EvmUtils/partition_EVM_inputs.pl --genome /home/Documents/data/P6125_Assembly.fasta.masked --gene_predictions /home/Documents/EVM/inputs/genes.final.gff3 --protein_alignments /home/Documents/EVM/inputs/final.gff3 -- ...
written 4 months ago by ashaneev0720
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Comment: C: EvidenceModeler # Error, cannot write
... I've checked it with the snap file only but, that seems running smoothly and creates output files in the same directory. by adding the augustus result it shows the same error. ...
written 4 months ago by ashaneev0720
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EvidenceModeler # Error, cannot write
... Hiii.... I've been trying to run Evidence modeler using gene predictions from Augustus and snap. But i'm getting the following error. Can anyone please help me out of this? Thank you in advance.... writing /home/Documents/EVM/inputs/genes.final.gff3 for scf7180000642636 Error, cannot wr ...
gene prediction evm written 4 months ago by ashaneev0720
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Comment: C: Exonerate installation on server
... Actually i'm planning to run the exonerate on hpc cluster platform because of my system ran out of memory. So how do i install exonerate o the server ? is the available linux binaries enough for this ? could u please give me a clarification on this ? ...
written 5 months ago by ashaneev0720
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Exonerate installation on server
... Hi everyone.... Could anyone please share about how to install exonerate on server.... ...
installation exonerate alignment written 5 months ago by ashaneev0720 • updated 5 months ago by ATpoint38k
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Comment: C: Exonerate killed automatically
... Any guesses ? !!! ............. ...
written 5 months ago by ashaneev0720
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Comment: C: Exonerate killed automatically
... Hmm...it contains 6919 sequences. I was split the data into 4 (113 mb) but, that also shows the same error. ...
written 5 months ago by ashaneev0720
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Comment: C: Exonerate killed automatically
... It took around 20-30 mnts. My desktop detils is given below kindly check. Memory 16 gb OS typ 64-bit os ubuntu 18.o4 ...
written 5 months ago by ashaneev0720
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Comment: C: Exonerate killed automatically
... My system has 16 gb of RAM and now free -m total used free shared buff/cache available Mem: 15928 2731 11912 126 1285 12790 Swap: 2047 1079 968 ...
written 5 months ago by ashaneev0720

Latest awards to ashaneev07

Popular Question 4 months ago, created a question with more than 1,000 views. For Picard MarkDuplicates shows error (removing pcr duplicates)
Popular Question 8 months ago, created a question with more than 1,000 views. For Error while running gatk
Popular Question 11 months ago, created a question with more than 1,000 views. For Error while running gatk

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