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RNAseq sample never as A in last base
rna-seq fastqc written 4 hours ago by i.sudbery ♦ 4.0k • updated 8 minutes ago by lieven.sterck ♦ 4.1k
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10
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How to compare models of evolutions with LRT?
substitutionmodels likelihoodratiotest written 30 minutes ago by Mimmi Ahlmén • 10
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News: Workshop for genomic data visualization and interpretation
R news ggplot2 rna-seq genomics written 3 months ago by Malachi Griffith ♦ 17k
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2
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30
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2
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Problem installing HTSeq on Windows 10
software error written 3 hours ago by makwana.kd • 0 • updated 55 minutes ago by jared.andrews07 • 1.8k
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16
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How to generate a stripplot like this in Python or R?
visualization rna-seq written 59 minutes ago by Ting-You Wang • 50
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17
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Estimate gene expression data
gene written 1 hour ago by banerjeeshayantan • 80
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1
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19
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1
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lfcShrink function in DEseq2 is giving me an error
rna-seq written 1 hour ago by Fawzi Yassine • 0 • updated 1 hour ago by ATpoint ♦ 14k
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13
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combine assemble transcripts in both genome-guided and de novo modes
assembly rna-seq written 1 hour ago by tobytaogf • 0
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23
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Help with R differential expression analysis
R rna-seq written 2 hours ago by mlai2567 • 0
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1
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406
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5 follow
1
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Merge vcf files with multiple samples into one vcf with all variants
vcf snp written 3 months ago by bioinfo89 • 40 • updated 2 hours ago by zx8754 ♦ 6.7k
423
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18
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35k
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195 follow
18
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 2.3 years ago by Istvan Albert ♦♦ 79k • updated 2 hours ago by Glory Basumata • 10
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35
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Uneven PCR in RNA-seq Preparation
rna-seq written 3 hours ago by biostar.anon • 0
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26
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How can I be sure that the mpileup result is correct, and what is the reasons for the incorrect results of mpileup command of SAMtools
software error next-gen alignment snp written 3 hours ago by hamid.khape • 0
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27
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Double checking R model
deseq2 rna-seq written 3 hours ago by andrea.etter • 0
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4
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1.2k
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7 follow
4
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How to merge vcf files with different variants but same samples?
vcf written 10 months ago by humeira.tayyab • 0 • updated 3 hours ago by Renesh • 1.5k
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63
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How to get a JTT-fsite model and JTT-fgene model from JTT model provided by PAML
gene jtt-f model written 27 days ago by PandaGoo • 0 • updated 3 hours ago by Biostar ♦♦ 20
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1
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122
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1
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Searching for a sequence within another sequence Biopython
alignment sequence written 3 days ago by bethpearson98 • 0 • updated 4 hours ago by jrj.healey ♦ 11k
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18
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Which are the updated and readily available/downloadable drug-bound complexes or datasets available?
drug binding residue prediction datasets written 4 hours ago by Misha • 0
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25
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About the Align and RMSD in PyMol
rmsd alignment pymol written 4 hours ago by Halcyon Murphy • 0
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29
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Ensembl Biomart : One Ensembl transcript ID for several UniprotKB ID
genome written 4 hours ago by Chat-ra • 0
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28
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Are there any tools that can create a very basic GTF file from contig sequences (no annotations really needed) ?
assembly mapping written 4 hours ago by O.rka • 80
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38
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1
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An error message while installing gromacs on windows 10 (Linux bash shell, ubuntu)
ubuntu gromacs written 6 hours ago by DS • 0 • updated 4 hours ago by austinjpaul • 30
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21
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unifrac distances for WGS data with qiime2
software error written 4 hours ago by josmos43 • 0
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1
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67
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1
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Human genome annotation
htseq rna-seq written 5 hours ago by justinkablan225 • 0
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1
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31
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1
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How do I download TCGA SNV data for patients with ER+/HER2- breast cancer?
tcga snp written 6 hours ago by graeme.thorn • 30 • updated 5 hours ago by Kevin Blighe ♦ 39k
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1
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7 follow
1
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Retrieve many FASTA of the same gene from NCBI..
gene fasta sequence written 2 days ago by uwardgma • 0 • updated 5 hours ago by genomax ♦ 63k
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1
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39
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1
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GATK PrintRead Producing Empty File
gatk printread written 8 hours ago by BAGeno • 120 • updated 5 hours ago by Pierre Lindenbaum ♦ 117k
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30
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(Closed) Rename files that are stored in a list in python
python textfiles path basename lists written 6 hours ago by Jonas.Koch • 0
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29
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Map illumina reads to multi-fasta in "no mismatches" mode with statistics
sequencing dnaseq paired-end alignment assembly written 6 hours ago by grassostefan • 0
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32
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0
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RMBlast install error
software error tool written 6 hours ago by xhfeng0307 • 0 • updated 6 hours ago by ATpoint ♦ 14k
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