0
votes
0
replies
9
views
0
votes
0
replies
10
views
0
votes
1
reply
25
views
updated 50 minutes ago by
rpolicastro
6.7k
•
written 2 hours ago by
Hosny.yasmine123
•
0
0
votes
0
replies
17
views
0
votes
0
replies
25
views
3
votes
4
replies
76
views
updated 1 hour ago by
rpolicastro
6.7k
•
written 3 hours ago by
June
▴
10
0
votes
4
replies
71
views
0
votes
0
replies
35
views
updated 3 hours ago by
Pierre Lindenbaum
140k
•
written 3 hours ago by
Anupriya
•
0
1
vote
2
replies
73
views
1
vote
3
replies
114
views
0
votes
1
reply
80
views
updated 5 hours ago by
rpolicastro
6.7k
•
written 5 hours ago by
bookorg
•
0
633
votes
159
replies
74k
views
95 follow
0
votes
1
reply
79
views
1
vote
3
replies
119
views
updated 4 hours ago by
rpolicastro
6.7k
•
written 5 hours ago by
Space_Life
▴
40
0
votes
2
replies
110
views
4 hours ago by
dmitry.s.kolobkov
•
0
0
votes
0
replies
42
views
6 hours ago by
v.berriosfarias
▴
30
4
votes
6
replies
1.9k
views
6 follow
updated 6 hours ago by
holze.henriett
•
0
•
written 4.3 years ago by
aleksanderczeszyk
•
0
0
votes
2
replies
93
views
updated 4 hours ago by
Pierre Lindenbaum
140k
•
written 6 hours ago by
michael.flower.14
▴
30
0
votes
3
replies
124
views
0
votes
2
replies
148
views
0
votes
1
reply
73
views
updated 7 hours ago by
Pierre Lindenbaum
140k
•
written 8 hours ago by
tea.vuki
•
0
0
votes
0
replies
54
views
7 hours ago by
Jesus Uriel
•
0
0
votes
1
reply
65
views
updated 7 hours ago by
GenoMax
110k
•
written 8 hours ago by
pragathi.sneha91
•
0
5
votes
5
replies
421
views
0
votes
2
replies
104
views
updated 8 hours ago by
cpad0112
17k
•
written 9 hours ago by
marcus.teixeira
•
0
0
votes
1
reply
193
views
updated 9 hours ago by
Rory Stark
★
1.3k
•
written 8 weeks ago by
Drew
•
0
0
votes
0
replies
44
views
3
votes
4
replies
578
views
1
vote
0
replies
78
views
0
votes
3
replies
134
views
0
votes
2
replies
97
views
0
votes
0
replies
37
views
10 hours ago by
boymin2020
▴
30
5
votes
4
replies
219
views
updated 10 hours ago by
Jorge Amigo
13k
•
written 1 day ago by
elb
▴
210
4
votes
3
replies
157
views
updated 11 hours ago by
Jorge Amigo
13k
•
written 15 hours ago by
Julian.dekker
▴
20
1
vote
3
replies
219
views
updated 12 hours ago by
ATpoint
55k
•
written 1 day ago by
2973520704
•
0
7
votes
4
replies
148
views
updated 12 hours ago by
ATpoint
55k
•
written 13 hours ago by
elcortegano
▴
110
0
votes
2
replies
118
views
12 hours ago by
anikcropscience
▴
40
0
votes
1
reply
71
views
updated 10 hours ago by
antonioggsousa
★
2.3k
•
written 13 hours ago by
poet1988
•
0
3
votes
8
replies
375
views
0
votes
0
replies
37
views
0
votes
0
replies
51
views
0
votes
4
replies
122
views
1
vote
1
reply
97
views
updated 14 hours ago by
ivivek_ngs
★
5.1k
•
written 17 hours ago by
Amy
•
0
0
votes
0
replies
38
views
1
vote
2
replies
163
views
0
votes
3
replies
265
views
updated 15 hours ago by
Alex Reynolds
33k
•
written 6 days ago by
vm.higareda
▴
20
0
votes
0
replies
40
views
16 hours ago by
quentin54520
▴
20
0
votes
0
replies
19
views
16 hours ago by
Novogene
▴
140
0
votes
0
replies
50
views
0
votes
0
replies
93
views
Recent Votes
Recent Locations •
All
Toronto, 8 minutes ago
United States, 9 minutes ago
Japan, 10 minutes ago
University of Maryland, 14 minutes ago
United States, 16 minutes ago
United States, 16 minutes ago
Aarhus, 20 minutes ago
Recent Awards •
All
Popular Question to
nina.maryn
▴
20
Popular Question to
bandanaschapagain
▴
30
Supporter to
michael.flower.14
▴
30
Popular Question to
WUSCHEL
▴
540
Scholar to
Barry Digby
▴
890
Popular Question to
rmf
★
1.3k
Popular Question to
curious
▴
630
Recent Replies
Comment: query sequence is input sequence or its reverse complement
by
rpolicastro
6.7k
What are you trying to do?
Comment: Extracting promotes from UCSC
by
rpolicastro
6.7k
Just a link to the promoter file and adding your code to the post would be fine for now.
Comment: Determine RNA transcription from common transcriptome data
by
rpolicastro
6.7k
Even with longitudinal RNA-seq data it would be difficult to get kinetics information because you wouldn't really know whether changes in t…
Comment: Determine RNA transcription from common transcriptome data
by
Dunois
★
1.6k
Could it work if you had time series data of sufficient temporal resolution?
Comment: Extracting promotes from UCSC
by
peter
▴
10
Do you mean clinvar file or the promoters bed file?
Comment: Doubt samtools flagstat
by
GenoMax
110k
Since 80% of reads are mapped it is likely that the reads are out of sync if the R1/R2 files were processed/trimmed independently. Fix usin…
Comment: Determine RNA transcription from common transcriptome data
by
June
▴
10
Hi rpolicastro,
Thanks for the explanation. In my case, I have several bulk RNA sequencing samples coming from the same germline, some of …
Comment: Extracting promotes from UCSC
by
rpolicastro
6.7k
You should include the file you downloaded and the code you used.
Comment: Determine RNA transcription from common transcriptome data
by
rpolicastro
6.7k
RNA-seq only measures the steady-state level of mRNA which is a combination of syththesis rate/frequency and mRNA stability. It would be di…
Comment: Doubt samtools flagstat
by
swbarnes2
11k
I'd start by examining why the properly paired % is so low.
Comment: NCBI's Efetch not working
by
Jonathan
▴
10
Thank you! Looks like it was an installation error, as you suggested. The original install command came from the NCBI website (https://www.…
Comment: How to calculate distance matrix and phylogenetic tree for genome alignment
by
Kumar
▴
120
I used Mugsy, progressiveMauve and Mauve. However, I could not find the distance matrix to show the percentage similarity.
Comment: igBLAST query/options error
by
Ram
35k
Moving a data directory to a binaries directory is not good practice at all. it might work as a hack, but please don't suggest as a solutio…
Traffic: 1516 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6