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Combining the RNAseq datasets
next-gen rna-seq written 7 weeks ago by prp291 • 50 • updated 1 hour ago by Biostar ♦♦ 20
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61
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1
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Understanding de-novo transcriptome assembly quality using Transrate
assembly rna-seq written 4 hours ago by nayaraevelin2 • 0 • updated 1 hour ago by Carlos Caicedo • 80
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Job: Research Officer - Systems Genomics
genome R rna-seq snp job written 20 hours ago by Marta.Brozynska • 10
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49
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FALCON error while running
falcon written 3 hours ago by s.kyungyong64 • 0
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60
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Including failed minION reads in alignment
alignment minion written 3 hours ago by eayasi • 0
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45
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Connectivity Map Broad
cmap broad written 3 hours ago by Jack • 60
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64
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Editing header of a fasta file
fasta header edition written 4 hours ago by danielavargasrobles • 0
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55
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Pulling TSV automatically from STRINGDB
stringdb written 4 hours ago by hakimelakhrass • 70
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108 follow
14
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 6 months ago by Istvan Albert ♦♦ 71k • updated 5 hours ago by kenanh • 10
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59
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DEGs of various metastatic samples
metastasis deg written 5 hours ago by fahime.falahi • 0
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Selecting variants from a VCF file
vcf next-gen variant snp written 3.0 years ago by matt.christmas85 • 0 • updated 6 hours ago by panatheod • 0
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66
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pysam truncated file error
python samtools pysam written 6 hours ago by pupatel • 0
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1
answer
67
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1
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extract SNPs (rs.....) along with subject ID and pedigree ID in PLINK
plink written 8 hours ago by pkpdkachroo • 0
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60
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Search VCF by ID in Python
python snp written 7 hours ago by MMa • 180
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70
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1
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How to submit bacterial genomes to the database?
genome bacteria submission written 7 hours ago by olp123 • 0 • updated 7 hours ago by Istvan Albert ♦♦ 71k
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49
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tool_dependencies.xml Not Working - Why?
galaxy assembly dependency tool xml written 7 hours ago by mltaylor211 • 0
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2
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112
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Specific sequence abundance using RNA-Seq
expression rna-seq written 14 hours ago by user230613 • 240 • updated 7 hours ago by Brian Bushnell ♦ 12k
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1
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78
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1
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Lowest common ancestor
lca taxonomy written 12 hours ago by David • 50 • updated 7 hours ago by Brian Bushnell ♦ 12k
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2
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108
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2
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Identification of short insertions in genome
wgs alignment written 12 hours ago by valerie • 30 • updated 7 hours ago by Brian Bushnell ♦ 12k
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116
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Unknown Error running GESS
software error rna-seq written 1 day ago by jjrin • 0
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3
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3.4k
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3
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How To Find The Pan Genome Of 30 Bacterial Strains
genome bacteria written 4.6 years ago by Nari • 810 • updated 7 hours ago by Biostar ♦♦ 20
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1
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100
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Adding sequences to preexisting MAF alignment
genome alignment sequence written 1 day ago by Carla • 30 • updated 7 hours ago by Istvan Albert ♦♦ 71k
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1
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MapSplice Error: could not execute Bowtie
software error alignment rna-seq written 14 hours ago by BJ • 0 • updated 7 hours ago by Istvan Albert ♦♦ 71k
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5 follow
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What is contained in the GRCh38 reference, and how was it constructed?
genome assembly next-gen written 11 hours ago by olavur • 20 • updated 8 hours ago by Istvan Albert ♦♦ 71k
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439
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constitutive vs core exons?
splicing microarrays exons written 20 months ago by peter pfand • 70 • updated 8 hours ago by castelain.gautier • 0
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Error in opening map file in PLINK
snp written 8 hours ago by Aparna • 0
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57
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Tool For Taxonomy Classification Of contigs and reads
assembly next-gen blast alignment sequencing written 9 hours ago by blancai.taboada • 0
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1
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89
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1
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unexpectedly low speed of STAR aligner
star rna-seq written 10 hours ago by nfursova.msu • 0 • updated 9 hours ago by Devon Ryan ♦ 68k
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85
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[E::hts_idx_push] chromosome blocks not continuous :Indexing of gff3 files using tabix error
gff3 tabix samtools gt gff genometools written 13 hours ago by chevivien • 50 • updated 10 hours ago by WouterDeCoster ♦ 19k
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6 follow
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Representing A Feature Along The Length Of The Chromosome
chromosome written 5.0 years ago by arunbhupathy • 20 • updated 11 hours ago by bernatgel • 550
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