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8 follow
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A constant problem with SAM file header
software error bowtie2 sam written 1 hour ago by popescuiofelia0 • updated 1 hour ago by h.mon20k
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2
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Cuffmerge: GFF Error: duplicate/invalid 'transcript'
gtf_to_sam cufflinks rna-seq cuffmerge written 2.5 years ago by pld4.7k • updated 1 hour ago by 24692960490
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95
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1
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How to merge two haploid samples (vcf, or g.vcf) into a pseudo-diploid?
genome written 11 days ago by Pistachio0 • updated 1 hour ago by genomax57k
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38
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Extracting a specific string pattern from a list of objects
R string subsetting data snp tcga written 2 hours ago by dodausp0 • updated 1 hour ago by jweile0
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85
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toil stats under-reporting memory usage?
toil cwl written 22 hours ago by ionox0160
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19
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173 follow
19
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 22 months ago by Istvan Albert ♦♦ 77k • updated 2 hours ago by RamRS18k
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6
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5 follow
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How is it possible to have more than 25000 genes in counts file?
rna-seq sequencing written 4 hours ago by Batu100 • updated 3 hours ago by Friederike2.3k
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Finding the number of aligned nucleotides per read in a sam file
cigar stings sam written 3 hours ago by ioannis20 • updated 3 hours ago by Pierre Lindenbaum112k
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Plot of 2 replicates
R rna-seq written 3 hours ago by dianalves170 • updated 3 hours ago by RamRS18k
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how can i use python in multiple sequence alignments?
alignment sequencing written 7 hours ago by sallyzaki700 • updated 4 hours ago by jrj.healey7.5k
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7 follow
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Bedtools intersect alternatives available
bedtools written 5 hours ago by Jeffin Rockey720 • updated 4 hours ago by Alex Reynolds26k
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Use OrthoDB to retrieve the orthologs between human and bacteria
orthologs orthodb written 26 days ago by wangdp123120 • updated 4 hours ago by Christophe Dessimoz480
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47
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141
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NovoPlasty is producing identical Assemblies
assembly novoplasty mitochondria written 9 weeks ago by micro32uvas0 • updated 5 hours ago by Biostar ♦♦ 20
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3
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60
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miRdeep2 mapper error
mirdeep2 mapper.pl written 6 hours ago by nivya.james20160 • updated 6 hours ago by genomax57k
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5 follow
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48
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Genomic coordinates from GENCODE annotation file
genomic coordinate gencode annotation file written 1 day ago by seta1.0k • updated 8 hours ago by Emily_Ensembl16k
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