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<prev • 49,861 results • page 1 of 1663 • next >
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svaseq and combat
combat sva effect batch written 9 weeks ago by runnerbio88 • 50 • updated 3 minutes ago by Biostar ♦♦ 20
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18
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Taking out Heatmap cluster
R written 28 minutes ago by krushnach80 • 150
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60
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#rna-seq 2 tissue, 2 different individual, no replicate, what can i analysis?
rna-seq written 1 hour ago by t2g4free • 0
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37
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Stringtie/gffcompare annotation is missing many transcripts (high sensitivity, low precision)
annotation alignment rna-seq written 49 minutes ago by Ace • 0
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1
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57
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1
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[DESeq2] Time-Course Experimental design
R time-course rna-seq written 3 hours ago by mioappoggio • 0 • updated 50 minutes ago by badribio • 150
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332
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VCF Merge using Vcf Tools
variant depth vcftools written 7 months ago by ankur.c • 0 • updated 53 minutes ago by genomax ♦ 30k
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3
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608
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3
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RNAseq problems with tophat
rna-seq written 16 months ago by clizama • 0 • updated 59 minutes ago by akhilesh • 0
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RepeatMasker: considering only the matches with a specific length
alignment length reference repeatmasker written 1 hour ago by gabri • 10
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42
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how to generate .pop file to run ADMIXTURE
.pop files run admixture admixture written 2 hours ago by c_barbarosie • 0
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112 follow
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 7 months ago by Istvan Albert ♦♦ 73k • updated 1 hour ago by kenanh • 10
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71
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Regarding vcf output
next-gen snp written 4 hours ago by lakhwanideepika • 0 • updated 2 hours ago by aays • 10
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137
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Simplest genome protein annotation pipeline possible
genome annotation proteins written 12 days ago by Eric Normandeau ♦ 9.4k
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51
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TCGA RNAseq files
rna-seq written 2 hours ago by shiyang93 • 10
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Controlling for batch and estrus cycle using DESeq2 in RNA-seq analysis
batch effects rna-seq random effects written 2 hours ago by Dipro • 0
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88
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Making a vcf file from a subset of regions from gvcf files
vcf gatk written 3 days ago by Floris Brenk • 790 • updated 2 hours ago by aays • 10
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how to rectify python AttributeError: 'NoneType' object has no attribute 'strip'
rna-seq written 5 hours ago by stafnymd • 0 • updated 3 hours ago by aays • 10
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6 follow
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I have a list of 80 ensembl ids(gene stable ids) for which BioMart is not generating gene names.
ensembl biomart written 8 hours ago by devina1404 • 0 • updated 3 hours ago by Pierre Lindenbaum ♦ 96k
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How to extract only TUMOR variants from vcf file?
vcf vcftools written 5 hours ago by Fill • 70 • updated 3 hours ago by igor • 4.4k
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2
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5 follow
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Comparison between multiple fasta files in terms of presence or absence of certain sequences
sequence alignment rna-seq written 5 hours ago by Bernhard.T.Werner • 0 • updated 3 hours ago by WouterDeCoster ♦ 20k
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99
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Any tool that aligns sequences that use degenerated nucleotide coding
alignment sequence degenerated coding dna written 4 hours ago by dabid • 0 • updated 4 hours ago by Jean-Karim Heriche ♦ 11k
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how to remove number, barcodes after reads number in demultiplexed Miseq file
next-gen written 4 hours ago by insilicobrain • 20 • updated 4 hours ago by Pierre Lindenbaum ♦ 96k
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6 follow
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number of threads for cufflinks transcript assembly
assembly rna-seq written 13 days ago by hassan giahi • 0 • updated 4 hours ago by colindaven • 260
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56
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Ensembl Variation REST API Phased Haplotype?
ensembl haplotype rest api 1000 genomes written 5 hours ago by johntimcham • 0
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1
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115
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Cloud Computer Cluster VS Local Compute Cluster for RNAseq analysis
cluster cloud compute rna-seq written 12 hours ago by Chen Mor • 0 • updated 5 hours ago by Jean-Karim Heriche ♦ 11k
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63
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AnnotationDbi using UCSC annotation
annotationdbi rna-seq ucsc written 5 hours ago by jadepinket • 10
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112
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5 follow
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What makes assigning A/T and G/C SNPs to a strand unreliable if MAF is not near 0.5?
a/t g/c snp strand written 3 days ago by Vincent Laufer • 870
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Geo data downloading
rna-seq written 5 hours ago by Xmya • 20
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3
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2.6k
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6 follow
3
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Local Graphic View Of Blast Results
visualization blast written 5.9 years ago by Dejian • 1.2k • updated 5 hours ago by Maciej Jończyk • 550
5
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1
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738
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Identify sequencing machine based on fastq-file/reads
raw reads sequencing machine fastq sequencing written 11 months ago by Jenez • 470 • updated 5 hours ago by vaslanzadeh • 0
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148
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How to get sequencing depths from VCF with Rsamtools
R rsamtools pindel written 6 days ago by MMa • 210 • updated 5 hours ago by Pierre Lindenbaum ♦ 96k
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