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How to calculate fraction of RNA-Seq reads mapped to a customised genomic locations?
rna-seq written 2 hours ago by biorepine1.1k • updated 26 minutes ago by WouterDeCoster4.1k
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Sample .sam file
alignment next-gen sequence .sam sam written 28 minutes ago by torkel.loman0
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SPAdes insert size
genome spades miseq written 43 minutes ago by treitlis0
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(Closed) Long non coding RNA
lncrna written 1 hour ago by world_genesis0 • updated 1 hour ago by medhat4.5k
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Error in SAMseq analysis with R
R rna-seq written 1 hour ago by namilio060
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84
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5 follow
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download protein sequences from NCBI
fasta ncbi protein written 3 hours ago by guillaume.rbt100 • updated 1 hour ago by thibault.lorin3480
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Should I run Gap close in assembly ?
gap close written 8 weeks ago by picasa1983180 • updated 2 hours ago by medhat4.5k
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Picard vs Samtools duplicate removal
assembly next-gen alignment sequencing written 4 hours ago by conorproud890 • updated 2 hours ago by i.sudbery420
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IGV Visualisation Problem
vcf snpsift vcftools igv written 19 hours ago by morovatunc190
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visualize noncoding mutations
genome cbioportal cancer written 4 hours ago by Pappu1.6k
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questions about rMATS output
rna-seq written 2 days ago by zhaopeihua05200 • updated 10 hours ago by Charles Warden4.3k
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305
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Cufflinks version higher than 1.3.0 gives 0 DEG
rna-seq written 8 months ago by debashis.bioinfo0 • updated 11 hours ago by Biostar ♦♦ 0
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PCA plot- R/Bioconductor-Deseq2
bioconductor deseq2 rna-seq written 12 hours ago by Lindsay440 • updated 12 hours ago by karl.stamm2.8k
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Whole Genome Alignment for plant genomes
wga alignment written 14 hours ago by sbdk8220 • updated 13 hours ago by microfuge120
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How does TCGA get Segment_Mean in files of copy number variations?
sequence snp sequencing written 29 days ago by Ashleyca0 • updated 14 hours ago by Zhenyu120
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106
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Time series microarray data
timeseries microarrays cancer written 15 hours ago by Andrea30 • updated 15 hours ago by joe.cornish8264.1k
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How to download TCGA histopathology data for all TCGA samples
gene next-gen written 18 hours ago by sunilpachakar0 • updated 15 hours ago by natasha.sernova1.6k
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55
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