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Recent Replies
Comment: Alignment fastq files
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Thanks for advice by my pipeline is quite long and working like it is, just the result are not expected. But that what you have wrote is ex…
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Thanks, I've corrected my post!
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You should include all of your code leading up to this point and the error you are getting in your pipeline, otherwise we can't really give…
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My suggestion is to merge .bam files prior to peak calling, rather than merging peak calling output files.
You can merge .bam files using …
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Dear Sean,
it works perfectly. big thank for your kind help and thank to galaxy too.
Kind Regards,
synat
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I'm going to interpret your question a bit. I'm assuming here that you just want to convert your `data.frame` to a matrix.
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Dear galaxy,
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https://bioinformaticshome.com/bioinformatics_tutorials/sequence_alignment/substitution_matrices_page2.html
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oh yes, now it does.This is an absolute coverage of the genome in question right? it definitely makes more sense when you give a seq length…
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Agreed. The fastqc now looks perfectly fine and you can proceed with downstram analysis.
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Many thanks, ATpoint. Strange, your comment has not appeared here, but in my messages box. The data used for meta-analysis is Microarray, n…
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