0
votes
1
reply
45
views
2
votes
3
replies
136
views
updated 31 minutes ago by
Mensur Dlakic
★
14k
•
written 21 hours ago by
amansinha.sw
•
0
0
votes
0
replies
19
views
1
vote
2
replies
65
views
updated 2 hours ago by
Mensur Dlakic
★
14k
•
written 3 hours ago by
Xiaoyun
•
0
0
votes
1
reply
62
views
622
votes
157
replies
72k
views
93 follow
0
votes
0
replies
26
views
2 hours ago by
Camila Martínez
•
0
0
votes
0
replies
33
views
4 hours ago by
BerkeleyLab
▴
50
0
votes
1
reply
72
views
updated 4 hours ago by
Papyrus
★
1.5k
•
written 8 hours ago by
Abdou-samad
•
0
0
votes
1
reply
59
views
updated 4 hours ago by
Papyrus
★
1.5k
•
written 5 hours ago by
patrickvanzalm
•
0
8
votes
22
replies
4.1k
views
9 follow
updated 7 hours ago by
richard.clark
•
0
•
written 2.1 years ago by
segrossk
▴
20
0
votes
3
replies
102
views
2
votes
2
replies
162
views
8 hours ago by
Sarah
▴
20
3
votes
4
replies
782
views
2
votes
2
replies
100
views
4 hours ago by
joe
▴
230
0
votes
0
replies
124
views
0
votes
0
replies
59
views
0
votes
0
replies
33
views
4
votes
5
replies
136
views
6 follow
written 13 hours ago by
Takuma
▴
10
1
vote
2
replies
97
views
updated 9 hours ago by
William Rowell
▴
20
•
written 18 hours ago by
g744695539
•
0
0
votes
0
replies
27
views
10 hours ago by
jsreddy
•
0
0
votes
1
reply
72
views
updated 10 hours ago by
Mensur Dlakic
★
14k
•
written 12 hours ago by
Michael Dondrup
49k
0
votes
0
replies
36
views
0
votes
0
replies
31
views
10 hours ago by
shahbazmunir11
▴
10
1
vote
1
reply
72
views
2
votes
2
replies
146
views
3
votes
1
reply
99
views
11 hours ago by
Ciaran
▴
20
0
votes
0
replies
29
views
11 hours ago by
strive
•
0
0
votes
0
replies
31
views
0
votes
2
replies
117
views
updated 12 hours ago by
Maximilian Haeussler
★
1.4k
•
written 1 day ago by
ellenbdrake30
•
0
1
vote
1
reply
90
views
2
votes
3
replies
133
views
0
votes
8
replies
313
views
6 hours ago by
biobiu
▴
120
0
votes
1
reply
86
views
updated 12 hours ago by
Istvan Albert
90k
•
written 2 days ago by
hans
•
0
0
votes
2
replies
76
views
updated 11 hours ago by
i.sudbery
13k
•
written 12 hours ago by
benformatics
★
2.6k
0
votes
1
reply
94
views
updated 12 hours ago by
Istvan Albert
90k
•
written 22 hours ago by
emiliomastriani
▴
30
6
votes
7
replies
288
views
2
votes
2
replies
101
views
updated 12 hours ago by
GokalpC
▴
80
•
written 13 hours ago by
yash_verma
•
0
0
votes
1
reply
98
views
updated 13 hours ago by
Istvan Albert
90k
•
written 22 hours ago by
lachiemck
•
0
2
votes
3
replies
174
views
updated 9 hours ago by
swbarnes2
11k
•
written 18 hours ago by
minuate126
•
0
0
votes
1
reply
107
views
updated 6 hours ago by
WouterDeCoster
46k
•
written 14 hours ago by
Ibrahim Tanyalcin
★
1.1k
0
votes
0
replies
33
views
0
votes
0
replies
35
views
0
votes
1
reply
58
views
updated 15 hours ago by
lieven.sterck
12k
•
written 15 hours ago by
andrea.furlani
•
0
0
votes
0
replies
32
views
3
votes
2
replies
264
views
0
votes
0
replies
30
views
0
votes
4
replies
467
views
2
votes
1
reply
403
views
updated 17 hours ago by
strive
•
0
•
written 14 months ago by
dominguez.matias
▴
20
0
votes
3
replies
119
views
updated 2 hours ago by
i.sudbery
13k
•
written 18 hours ago by
c.heininger
•
0
Recent Votes
Recent Locations •
All
Taiwan, just now
United States, just now
China, 1 minute ago
Penn State, 3 minutes ago
United States, 5 minutes ago
University of Connecticut, 7 minutes ago
UCSF - San Francisco, 7 minutes ago
Recent Awards •
All
Popular Question to
fouerghi20
▴
50
Popular Question to
Tain Luquez
▴
10
Popular Question to
Bharat
▴
10
Popular Question to
shahbazmunir11
▴
10
Scholar to
Pierre Lindenbaum
139k
Popular Question to
Chronos
▴
600
Recent Replies
Answer: ggplot split jitter within grouped boxes by different variables
by
Jianyu
▴
520
I didn't rebuild your dataset, could you try the code below? I think it should work
ggplot(ELISAtot) + geom_boxplot(aes(x = …
Answer: Importance of Multiple Sequence Alignment
by
Mensur Dlakic
★
14k
> I found in publications that some of the MAFFT algorithms are more accurate compared to other solutions for MSA but their adoption in Ind…
Answer: hisat2 /usr/bin/env: ‘python’: No such file or directory
by
Mensur Dlakic
★
14k
This error means one of the two things: 1) you don't have a system-wide installation of python; 2) your have python installed but it is not…
Comment: Searching metagenomic datasets for a specific species
by
Sarah
•
0
Thank you for your help!
Comment: Empty output from UMItools dedup after fastp processing
by
i.sudbery
13k
That is very werid. The file should at least be created, even if nothing goes into it. Can you run the same command without either the `-S`…
Answer: Loop for merging multiple BAM files from multiple lanes with different names int
by
GenoMax
107k
Here is one way to do this:
We are starting with these files
$ ls -1 *.bam
HCT116_Input_S50_L001_R1_001.bam
HCT116_Input_S50_…
Comment: hisat2 /usr/bin/env: ‘python’: No such file or directory
by
GenoMax
107k
How did you install `hisat2`? Using `conda`?
Comment: Convert transcriptomic bam to genomic bam
by
joe
▴
230
Wow, thank you...you have saved me oh so much time. Biostars for the win :)
Comment: In single cell RNA-seq, do we perform regular quality checks and adapter trimmin
by
mrj
▴
60
Thank you for the answer
Answer: Problem in plotting graph or Graphics Device in the RStudio
by
Papyrus
★
1.5k
The function is generating and saving the plot as a PDF file in your working directory, instead of showing it to you. If you want the plot …
Comment: Empty output from UMItools dedup after fastp processing
by
c.heininger
•
0
I don't even get a log file as an output, which just adds to my confusion
Comment: How to do gene enrichment with locally stored KEGG & Reactome data in R
by
Papyrus
★
1.5k
For example, the [goseq][1] package can be used with any custom file describing pathways/gene sets to perform enrichment analysis. (There i…
Comment: How Can I Know The Length Of Mapped Reads From Bam File?
by
Yingzi
•
0
Hi, thank you for your answer. Do you know how to modify your code if I want to specify the reads in a certain region, for example, want to…
Comment: About Foreign Fields in VCF (4.3)
by
WouterDeCoster
46k
Is there any reason why you would not add these key-value pairs to the INFO field?
Comment: Recommended mapper
by
biobiu
▴
120
Thanks,
The pipeline looks great!
I would try to better describe our issue and maybe it would help.
We have a collection of assembly based…
Traffic: 1726 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6