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Recent Replies
Answer: How to select rows in a column and add a zero to selected rows
by
erwan.scaon
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850
Hello,
# Packages
library(magrittr)
library(dplyr)
# Dummy data
test <- data.frame(
id = c(12345, 12345…
Answer: Read multiple VCF files through PyVCF
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liorglic
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There are a few strange things with your code, although I'm not sure if any of them should cause a permission error...
* `os.listdir()` ta…
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I'm assuming you are providing an input files to your command and have omitted in above.
Check if you have enough space, I suspect feat…
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Please show us *your* code.
In case you really wrote
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No, use the full 75bp of the R1 read. Ignore the R2. When you get to BAM stage you can check the quality of both using FASTQC. It will be t…
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What is the background of this? Just run the same pipeline for both and same genome if that is the only difference here. Makes no sense to …
Comment: How to select rows in a column and add a zero to selected rows
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a typo or copy/paste issue in this line `df <- mutate(df, id=str_pad(id, 6, "left"))`. In addition, for long numbers, user must set `scipen…
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I am an old school bioinformatician, I would simply re-write the whole VCF each time I change anything
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You might have to explain what you're trying to do more simply. You can certainly use a loop within lapply(), and use lapply() within a loo…
Answer: How to select rows in a column and add a zero to selected rows
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Example data.
df <- data.frame(id=c(12345, 123456), val=1:2)
> df
id val
1 12345 1
2 123456 2
Using `…
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Maryam
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Hi colindaven
Thank you very much for your help
According to the article, do you think I should do the alignment for the forward string o…
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you can write a function for either one and call it.
> I try to use two loop functions but if fails.
Please post error.
It would b…
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Edit your original post. Then fix the list of words so they actually reflect the question content (circled). You are allowed a maximum of 5…
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Can anyone help?
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Well, why did you use 500 genes? How are we supposed to answer that for you? If it's arbitrary, you may as well state as much. Presumably, …
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