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Recent Replies
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The file is unsorted as the error clearly indicates. Indexing requires coordinate-sorted file. Run samtools sort first.
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Ok. So can you name some tool that can give graphical outcome based histogram for paired end reads?
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Thanks, I had a quick look at pileup.sh, does this work in same as samtools -F 0x100 (removes non primary alignments)? Essentially I want t…
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I have the same problem today!
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> What have you tried exactly and why didn't it work ?
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BBMap does not produce graphical output. What you will get is a text based histogram.
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Everything is identical, only the sign of the fold change changes. A fold change of 2 in treatment vs control is a fold cahnge of -2 in con…
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From this paper [The application of deep learning for the classification of correct and incorrect SNP genotypes from whole-genome DNA seque…
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I'd tried to use nextflow nf-core chip-seq but I had trouble and I could not solve it
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I have an list of 10000 PDB files and I want their respective fasta files
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