updated 26 minutes ago by
Manuel Sokolov Ravasqueira
▴
100
•
written 2.9 years ago by
MatthewP
★
1.3k
10
votes
6
replies
4.7k
views
0
votes
0
replies
22
views
0
votes
0
replies
15
views
0
votes
1
reply
68
views
0
votes
0
replies
50
views
0
votes
4
replies
345
views
773
votes
164
replies
129k
views
107 follow
updated 9 weeks ago by
Biostar
2.3k
•
written 7.0 years ago by
Istvan Albert
99k
0
votes
1
reply
899
views
updated 11 hours ago by
gentlemonster
•
0
•
written 3.2 years ago by
prithvi.mastermind
▴
50
0
votes
0
replies
66
views
0
votes
2
replies
97
views
just now by
iamsmor
•
0
0
votes
1
reply
119
views
0
votes
1
reply
110
views
0
votes
0
replies
79
views
0
votes
1
reply
113
views
0
votes
0
replies
75
views
16 hours ago by
rj.rezwan
•
0
2
votes
7
replies
1.8k
views
6 follow
0
votes
0
replies
67
views
updated 16 hours ago by
Ram
41k
•
written 16 hours ago by
Matthew Chang
•
0
1
vote
3
replies
183
views
0
votes
3
replies
161
views
updated 16 hours ago by
Istvan Albert
99k
•
written 18 hours ago by
foejvs546
▴
10
5
votes
3
replies
206
views
15 hours ago by
synat.keam
▴
80
0
votes
0
replies
66
views
17 hours ago by
Manuel Sokolov Ravasqueira
▴
100
0
votes
1
reply
79
views
updated 1 hour ago by
andres.firrincieli
3.5k
•
written 17 hours ago by
mhale
•
0
0
votes
1
reply
104
views
0
votes
0
replies
65
views
0
votes
1
reply
108
views
updated 18 hours ago by
Pierre Lindenbaum
158k
•
written 19 hours ago by
cee28
▴
30
0
votes
1
reply
116
views
0
votes
0
replies
66
views
10
votes
4
replies
341
views
6 follow
0
votes
0
replies
70
views
0
votes
0
replies
68
views
0
votes
0
replies
80
views
1
vote
5
replies
218
views
1
vote
1
reply
140
views
updated 17 hours ago by
Istvan Albert
99k
•
written 1 day ago by
ManuelDB
▴
80
9
votes
15
replies
7.3k
views
updated 21 months ago by
Ram
41k
•
written 9.0 years ago by
Aurelie MLB
▴
360
3
votes
3
replies
238
views
updated 1 day ago by
Elisabeth Gasteiger
★
2.3k
•
written 1 day ago by
Dr.Animo
▴
80
2
votes
6
replies
263
views
1
vote
2
replies
173
views
updated 1 day ago by
GenoMax
136k
•
written 1 day ago by
Shicheng Guo
★
9.3k
0
votes
0
replies
89
views
updated 19 hours ago by
Ram
41k
•
written 1 day ago by
naodaigua_weng
•
0
0
votes
0
replies
93
views
2
votes
2
replies
203
views
updated 16 hours ago by
Ram
41k
•
written 1 day ago by
luckyday1661
•
0
0
votes
3
replies
205
views
23 hours ago by
marie.harmel
•
0
0
votes
1
reply
151
views
2
votes
2
replies
926
views
updated 1 day ago by
Ram
41k
•
written 2.3 years ago by
charlielonergan
▴
20
3
votes
4
replies
220
views
1 day ago by
Bioinfonext
▴
440
0
votes
3
replies
193
views
0
votes
0
replies
94
views
1 day ago by
pm2012
▴
140
0
votes
5
replies
268
views
1
vote
5
replies
336
views
updated 12 hours ago by
Brian Bushnell
20k
•
written 2 days ago by
Mary
•
0
0
votes
0
replies
99
views
0
votes
0
replies
95
views
1 day ago by
PeterC_NCBI
▴
370
Recent Votes
Recent Locations •
All
Turkey, just now
Europe, 4 minutes ago
Germany, 9 minutes ago
Spain, 12 minutes ago
Tehran, 13 minutes ago
Iran, 16 minutes ago
India, 16 minutes ago
Recent Awards •
All
Popular Question to
Maryam
•
0
Popular Question to
m.habib
•
0
Scholar to
Alex Reynolds
35k
Popular Question to
Mr Locuace
▴
150
Popular Question to
ivingan
•
0
Popular Question to
valizad2
▴
20
Popular Question to
Elizabeth
▴
30
Recent Replies
Answer: How to create interval list from reference fasta or dict file?
by
Manuel Sokolov Ravasqueira
▴
100
Hello @MatthewP , were you able to that for a fasta file for example? If you have a fasta file containing a targeted region, how to you ge…
Comment: WGCNA Dendrogram Branch missing from modules
by
andres.firrincieli
3.5k
I am not familiar with hdWGCNA but perhaps some modules are excluded because their genes are not expressed in a certain proportion of cells.
Comment: LCA from BLAST output
by
Michael
53k
If you know the lineage information is complete you could compare which columns are identical, however, there may be unranked levels in bet…
Comment: Is GeSeq currently unavailable?
by
GenoMax
136k
Email the developers listed on contact page: https://chlorobox.mpimp-golm.mpg.de/contact.html
Comment: Alternative to Gentrome?
by
GenoMax
136k
Curious as to what is `gentrome`? Genome decoy + transcriptome?
Comment: Java class error message when using BBDuk
by
GenoMax
136k
> I have cloned the bbmap Git Hub
You are not using official repository then.
BBMap is available from [**SourceForge**][1] or Bitbucket…
Comment: identifying SNPs from short read sequencing data
by
GenoMax
136k
Short answer is yes. Are you planning to sequence the entire genome after mutagenesis or only the selected region? In any case the analysis…
Comment: How to run Aracne cytoscape plugin ?
by
gentlemonster
•
0
@prithvi.mastermind have you been able to find a solution to this? if so, could you share how you did it?
Comment: Dimensionality reduction on data sets with variable dimensions
by
Mensur Dlakic
★
25k
You can try DNA/RNA language models and extract their embeddings based on your sequences. Those should be of the same length and presumably…
Comment: Dimensionality reduction on data sets with variable dimensions
by
rtrende
▴
80
I see what you mean that this method isn’t a perfect way to compare segments but I’ve had a very hard time finding other similarity metrics…
Comment: How should I run ssgsea analysis ?
by
sure
▴
100
@Ram there are 2 post from me that are that way...stupidity of mine this one and "p-value combination methods" can you remove those comment…
Answer: autodock vina on mac
by
Ram
41k
I googled "autodock vina virtualbox" and the 2nd web link I see is to this page: https://bioinformaticsreview.com/20220117/tutorial-how-to-…
Answer: How can I obtain the DNA sequences of each CDS for several genbank files?
by
Ram
41k
This is a simple python issue. You're missing indentation after your first `if`:
```py
cds = []
for feature in genome.features:
i…
Traffic: 1123 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6