20 minutes ago by
poet1988
•
0
0
votes
3
replies
156
views
0
votes
1
reply
52
views
0
votes
1
reply
18
views
0
votes
0
replies
13
views
26
votes
21
replies
7.4k
views
12 follow
updated 1 hour ago by
roder.thomas
▴
10
•
written 6.5 years ago by
dsarbashis
▴
60
633
votes
159
replies
74k
views
95 follow
1
vote
7
replies
952
views
updated 1 hour ago by
VAV
•
0
•
written 14 months ago by
yangjianhunt
▴
10
0
votes
1
reply
66
views
1
vote
7
replies
132
views
1
vote
1
reply
77
views
1
vote
1
reply
78
views
0
votes
0
replies
38
views
3
votes
3
replies
129
views
updated 3 hours ago by
seidel
8.6k
•
written 6 hours ago by
leranwangcs
▴
60
1
vote
7
replies
1.1k
views
updated 2 hours ago by
Mensur Dlakic
★
15k
•
written 2.0 years ago by
Moses
▴
130
2
votes
2
replies
116
views
0
votes
0
replies
38
views
0
votes
2
replies
190
views
updated 1 hour ago by
Mark
★
1.0k
•
written 7 hours ago by
Hosny.yasmine123
•
0
0
votes
0
replies
34
views
7 hours ago by
ancient_learner
▴
680
0
votes
1
reply
63
views
7 hours ago by
Alex Martins De Aguiar
•
0
0
votes
0
replies
52
views
0
votes
0
replies
29
views
7 hours ago by
simplitia
▴
70
0
votes
5
replies
223
views
updated 9 hours ago by
carlk
▴
10
•
written 1 day ago by
dmitry.s.kolobkov
•
0
0
votes
1
reply
72
views
updated 10 hours ago by
Pierre Lindenbaum
140k
•
written 10 hours ago by
priya.bmg
•
0
0
votes
0
replies
35
views
10 hours ago by
aleksey.rukhlenko
•
0
0
votes
1
reply
38
views
0
votes
1
reply
143
views
updated 9 hours ago by
ATpoint
55k
•
written 11 hours ago by
mohammedtoufiq91
▴
120
0
votes
0
replies
36
views
0
votes
1
reply
70
views
updated 11 hours ago by
antonioggsousa
★
2.3k
•
written 12 hours ago by
almogangel
•
0
2
votes
3
replies
479
views
1
vote
4
replies
213
views
13 hours ago by
graeme.thorn
▴
60
2
votes
2
replies
106
views
updated 3 hours ago by
seidel
8.6k
•
written 15 hours ago by
andres.firrincieli
★
2.0k
0
votes
5
replies
180
views
updated 6 hours ago by
Michael Dondrup
50k
•
written 16 hours ago by
a.krassnig
•
0
1
vote
1
reply
75
views
updated 11 hours ago by
lieven.sterck
12k
•
written 16 hours ago by
ctdarwell
•
0
0
votes
6
replies
212
views
updated 5 hours ago by
MirianT_NCBI
▴
10
•
written 16 hours ago by
emawhitt
•
0
0
votes
2
replies
163
views
updated 17 hours ago by
Pierre Lindenbaum
140k
•
written 1 day ago by
clinnaeus
▴
10
1
vote
2
replies
144
views
0
votes
0
replies
50
views
2
votes
4
replies
204
views
6 hours ago by
koushik.vf09
▴
20
1
vote
1
reply
142
views
2
votes
15
replies
1.7k
views
10 follow
updated 23 hours ago by
1505915157
•
0
•
written 18 months ago by
brallen
▴
20
0
votes
2
replies
305
views
updated 20 hours ago by
cpad0112
17k
•
written 1 day ago by
Hosny.yasmine123
•
0
0
votes
0
replies
49
views
4
votes
4
replies
174
views
updated 1 day ago by
rpolicastro
6.8k
•
written 1 day ago by
June
▴
10
0
votes
6
replies
268
views
0
votes
0
replies
56
views
updated 1 day ago by
Pierre Lindenbaum
140k
•
written 1 day ago by
Anupriya
•
0
2
votes
3
replies
171
views
2
votes
3
replies
152
views
0
votes
1
reply
106
views
updated 1 day ago by
rpolicastro
6.8k
•
written 1 day ago by
bookorg
•
0
0
votes
5
replies
235
views
1
vote
3
replies
141
views
updated 1 day ago by
rpolicastro
6.8k
•
written 1 day ago by
Space_Life
▴
40
Recent Votes
Recent Locations •
All
United States, 1 minute ago
United States, 5 minutes ago
South Korea, 10 minutes ago
South Korea, 12 minutes ago
Singapore, 13 minutes ago
South Korea, 13 minutes ago
New Zealand, 13 minutes ago
Recent Awards •
All
Teacher to
ancient_learner
▴
680
Popular Question to
James Ashmore
★
3.2k
Popular Question to
vm.higareda
▴
20
Popular Question to
anikcropscience
▴
40
Recent Replies
Comment: How to write out a ID and AA sequence from a SWISS PROT database file into a new
by
Mark
★
1.0k
Can you give an example of what you mean by swiss-prot file? I think you're describing a fasta file with amino acids. In that case use BioP…
Answer: Analog usearch -otutab_merge
by
poet1988
•
0
I wrote a simple and not elegant script (for 8 samples), maybe it will help someone.
>import pandas as pd
>import numpy as np
…
Answer: Adding new taxa to a Kraken2 db
by
Mark
★
1.0k
You can not add genomes to an existing, precomputed kraken db. You have to download the plant genomes, add the new genomes then recreate th…
Comment: Counting the number of major and minor alleles
by
Mark
★
1.0k
Can you post an example of the vcf file you're working on?
In a vcf file, you should have the genotype which you can use to filter/count …
Comment: Bash script to help with print Name of reads that only have query subsequence or
by
Mark
★
1.0k
To be honest, this sounds like a homework exercise...
Comment: How to read an mpileup file from Samtools into Python
by
M.O.L.S
▴
30
I did not know that 3.1 years ago. Thanks !
Comment: Help needed for Ensembl Gene ID conversion for RNA-seq data - biomart / EnsDb.Hs
by
VAV
•
0
thank you so much!
Comment: FastTree error while constructing tree
by
Mensur Dlakic
★
15k
You may also be able to get past this error by using the WAG matrix instead of LG, and in that case you could leave the other parameters as…
Comment: Help needed for Ensembl Gene ID conversion for RNA-seq data - biomart / EnsDb.Hs
by
GenoMax
110k
Remove the version numbers using directions here and it should work: https://www.biostars.org/p/302441/#302485
Comment: Genozip: A new compression tool for FASTQ, BAM, VCF and more
by
Divon
▴
150
Well, kinda :) What Genozip does is uncompress the existing compression and then re-compress with the better Genozip compression.
Answer: Flower plot in R ?
by
roder.thomas
▴
10
I developed a small Python script to do this:
https://github.com/MrTomRod/flower-plot
![enter image description here][1]
[1]: https:/…
Comment: Primer design for variants in duplicated genes?
by
asalimih
▴
40
the link doesn't work. but I think it is described [here][1] by Kevin .
[1]: https://www.biostars.org/p/9473967/
Comment: Labeling Clusters in ggplot
by
xuyingzheng4321
•
0
Hi, I just came across this thread and wanted to comment on it. Seurat is really nice and easy to use but it can get slow when you plot big…
Comment: Help needed for Ensembl Gene ID conversion for RNA-seq data - biomart / EnsDb.Hs
by
VAV
•
0
Hi! I am having a kind of similar issue, maybe someone could help me. My salmon gene quant output file is also on ensembl gene ID format wi…
Comment: bash script not a valid identifier
by
Belly
•
0
I knew that the other way around. But in that case it gives this '*_R1.fastq.gz': 'No such file or directory' , but I tried this on my fast…
Traffic: 1474 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6