0
votes
0
replies
1
view
0
votes
0
replies
11
views
55 minutes ago by
Ric
▴
370
0
votes
0
replies
11
views
0
votes
1
reply
57
views
0
votes
0
replies
18
views
2
votes
6
replies
192
views
0
votes
6
replies
522
views
0
votes
0
replies
30
views
updated 6 hours ago by
GenoMax
112k
•
written 7 hours ago by
Poromendro
•
0
648
votes
159
replies
77k
views
95 follow
2
votes
1
reply
130
views
1
vote
3
replies
103
views
updated 7 hours ago by
Mensur Dlakic
★
15k
•
written 8 hours ago by
MJ Mantas
•
0
0
votes
0
replies
53
views
3
votes
6
replies
174
views
0
votes
2
replies
85
views
0
votes
0
replies
37
views
8 hours ago by
Jonathan
•
0
0
votes
1
reply
58
views
8 hours ago by
Alexandra
▴
10
0
votes
0
replies
44
views
0
votes
0
replies
44
views
0
votes
0
replies
37
views
updated 10 hours ago by
GenoMax
112k
•
written 11 hours ago by
fabio.demartino2
•
0
5
votes
4
replies
173
views
updated 7 hours ago by
jared.andrews07
★
12k
•
written 13 hours ago by
kebl4660
▴
10
3
votes
14
replies
651
views
updated 12 hours ago by
zakaryarouzki
•
0
•
written 12 months ago by
plberry
▴
30
0
votes
2
replies
98
views
updated 12 hours ago by
Santosh Anand
5.5k
•
written 1 day ago by
Andrew Kernytsky
•
0
0
votes
3
replies
145
views
updated 11 hours ago by
K.patel5
▴
60
•
written 13 hours ago by
martin.gallix
•
0
0
votes
2
replies
101
views
updated 6 hours ago by
seidel
9.0k
•
written 13 hours ago by
vinishavvenugopal
▴
10
0
votes
0
replies
44
views
2
votes
2
replies
90
views
updated 13 hours ago by
andres.firrincieli
★
2.1k
•
written 14 hours ago by
matt81rd
•
0
2
votes
3
replies
95
views
14 hours ago by
sarah.laverty20
•
0
2
votes
4
replies
168
views
0
votes
2
replies
96
views
0
votes
0
replies
28
views
2
votes
3
replies
116
views
15 hours ago by
anjalivasudevan98
▴
30
1
vote
11
replies
372
views
updated 8 hours ago by
GenoMax
112k
•
written 1 day ago by
roberta.cracco
•
0
0
votes
2
replies
94
views
0
votes
1
reply
84
views
0
votes
1
reply
120
views
updated 17 hours ago by
liorglic
▴
570
•
written 1 day ago by
nakandalau
•
0
1
vote
1
reply
85
views
updated 13 hours ago by
Vitor1
▴
40
•
written 17 hours ago by
Assa Yeroslaviz
★
1.6k
0
votes
3
replies
139
views
updated 17 hours ago by
liorglic
▴
570
•
written 21 hours ago by
kobrarahimi4
•
0
0
votes
1
reply
71
views
updated 17 hours ago by
andres.firrincieli
★
2.1k
•
written 17 hours ago by
marion.ryan
▴
40
1
vote
2
replies
140
views
2
votes
4
replies
142
views
1
vote
1
reply
68
views
0
votes
6
replies
185
views
2
votes
3
replies
196
views
3
votes
1
reply
131
views
0
votes
0
replies
82
views
0
votes
0
replies
80
views
1 day ago by
anahit
•
0
0
votes
1
reply
143
views
updated 1 day ago by
Santosh Anand
5.5k
•
written 1 day ago by
Raman2
▴
30
6
votes
5
replies
207
views
0
votes
0
replies
55
views
7
votes
6
replies
247
views
Recent Votes
Recent Locations •
All
Mexico, 1 minute ago
India, 2 minutes ago
Canada, 5 minutes ago
United States, 6 minutes ago
Canada, 6 minutes ago
Texas, 7 minutes ago
Hong Kong, 8 minutes ago
Recent Awards •
All
Popular Question to
Ric
▴
370
Popular Question to
PeterKW
▴
60
Commentator to
Mark
★
1.1k
Scholar to
jon.klonowski
▴
100
Epic Question to
Francois Olivier Hébert
▴
280
Scholar to
Mensur Dlakic
★
15k
Popular Question to
Woa
★
2.9k
Recent Replies
Comment: Correlation of PRS obtained by plink and PRSice
by
Phylicia
•
0
https://www.biostars.org/p/9507659/
Hi Sam, I have asked a PRS related question. Could you give suggestions for it? Thanks!
Comment: How to apply lapply function and loop function at the same time
by
Phylicia
•
0
Thanks a lot! Could you also delete the "C:\\Siyu1\\bd37\\best\\" because I find it disclose my name. Sorry.=)
Answer: subset vcf to keep only samples heterozygous or homozygous for the alternate all
by
cfos4698
▴
470
If you want to use `bcftools`, you'll first need to get a list of all samples that are heterozygous or homozygous for the alternate allele …
Comment: Blastp DBv5 Against HMP Entrez_query Problems
by
GenoMax
112k
Since the original poster never came back to report if they heard from NCBI help desk you will have to ask them again. Please let us know w…
Comment: Issues Phasing with Eagle v2.4
by
Francisco
•
0
I'm still having a problem with the reference genome... it seems that my variants are not present in the reference. But does not make any s…
Answer: Issues Phasing with Eagle v2.4
by
Francisco
•
0
OK. So the issue was solved by adding a reference genome:
./eagle \
--vcfTarget ./C11_v1.vcf.gz \
--chrom 22 \
…
Comment: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
by
Denis
▴
210
Could you please explain me, why it would be scored by `bowtie2` as a high quality base in `Phred+33` mode since there is no `f` character …
Comment: Blastp DBv5 Against HMP Entrez_query Problems
by
manuel eduardo
•
0
Hi! How did you solve this problem? I also need to run BLAST only on the HMP databe
many thanks in advance!
Comment: plotMA - less significant genes
by
seidel
9.0k
Take the following with a huge grain of salt. Your experiment is showing you that whatever condition you are measuring, it doesn't have a l…
Comment: What are the pain points of using Genomics on the cloud today?
by
Ram
35k
> Data processing- with WDLs (simple readable language) are quite customizable I would think?
Yes, in theory. However, it is *one more th…
Comment: Best way to BLAST orthogroups?
by
Mensur Dlakic
★
15k
`hmmemit` from the [**HMMer**][1] package will output a consensus sequence from a given pHMM.
[1]: http://hmmer.org/
Comment: What are the pain points of using Genomics on the cloud today?
by
Istvan Albert
91k
I think using the "cloud" needs to be defined better, that way the pitfalls become clearer.
Does the "cloud" mean that we interact with it…
Comment: create index for genome instead of transcriptome using Salmon
by
swbarnes2
11k
Why would you use salmon for a genome alignment?
Answer: How to join two files into one in multiple folders using specific columns and ad
by
Pierre Lindenbaum
141k
> and name it by the originating folder.
awk '{printf("%s\t%s\n",$0,FILENAME);}' file1.txt > file2.txt
> I would like to join these …
Comment: What are the pain points of using Genomics on the cloud today?
by
Mamta
▴
480
agree- I believe they are working to solve this issue.
Traffic: 1779 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6