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20
votes
3
answers
26k
views
3
answers
Minor allele frequency calculation
next-gen snp written 2.9 years ago by Tark • 30 • updated 5 minutes ago by gpatil • 0
0
votes
0
answers
12
views
0
answers
Ensembl ID converter not working?
ensembl id conversion written 23 minutes ago by ericbrenner • 0
0
votes
0
answers
36
views
0
answers
Which of my mutations are SNPs? Is there an R package to annotate them?
R snp written 27 minutes ago by spromanos • 0
0
votes
2
answers
162
views
2
answers
what do the headers of the rMATS output files mean?
next-gen star mats alternative splicing written 3 months ago by atcggcta • 0 • updated 38 minutes ago by johannes.ptok • 0
0
votes
0
answers
38
views
0
answers
Error while installing RSeQC
rnaseq qc rseqc written 55 minutes ago by Jessica_bioinfo • 10 • updated 42 minutes ago by WouterDeCoster ♦ 21k
993
votes
68
answers
25k
views
143 follow
68
answers
What Are The Most Common Stupid Mistakes In Bioinformatics?
software written 6.5 years ago by Jeremy Leipzig ♦ 17k • updated 58 minutes ago by Chen • 540
0
votes
0
answers
190
views
0
answers
density of reads that mapped to the specific gene
rna-seq written 5 months ago by alirezamomeni707 • 0 • updated 1 hour ago by Biostar ♦♦ 20
0
votes
1
answer
84
views
1
answer
separating bed file into separate files for every 100000 base pairs
assembly written 4 hours ago by chrisclarkson100 • 50
0
votes
0
answers
32
views
0
answers
TF networks,modules, gene targets and binding sites
targets networks tfs modules rna-seq written 1 hour ago by hodatn • 0
0
votes
1
answer
52
views
1
answer
biocLite("SGSeq") package is not working for R version 3.2.3
sgseq written 2 hours ago by asravijv • 0 • updated 1 hour ago by theobroma22 • 930
0
votes
0
answers
42
views
0
answers
Cufflinks with large BAM file
rna-seq written 1 hour ago by qudrat • 0
0
votes
1
answer
72
views
1
answer
Finding target genes of a TF
plants tf rna-seq target written 2 hours ago by hodatn • 0 • updated 2 hours ago by Alex Reynolds ♦ 20k
0
votes
0
answers
231
views
0
answers
Job: Head of Bioinformatics Unit at Centre for Phenogenomics (Prague, Czech Rep.) - ALREADY TAKEN, DO NOT REPLY
job written 29 days ago by simecekp • 0
1
vote
1
answer
268
views
1
answer
Finding Variable Genes in Seurat, scRNA-seq
scrna-seq rna-seq seurat written 6 weeks ago by asyndeton17 • 10 • updated 2 hours ago by halo22 • 90
0
votes
1
answer
145
views
1
answer
Making a 3d tSNE Plot in Seurat for scRNA-seq
scrna-seq tsne rna-seq seurat written 23 days ago by asyndeton17 • 10 • updated 2 hours ago by halo22 • 90
284
votes
15
answers
14k
views
120 follow
15
answers
News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 9 months ago by Istvan Albert ♦♦ 73k
0
votes
0
answers
52
views
0
answers
Repository of CMfinder and Wublast
repository written 2 hours ago by jaimep887 • 0
0
votes
1
answer
73
views
1
answer
Time Course Design in DESeq2
deseq2 timecourse mirna-seq written 3 hours ago by gkuffel22 • 20 • updated 2 hours ago by shoujun.gu • 220
1
vote
4
answers
408
views
4
answers
Fastphase cluster determination
cluster genotypes fastphase written 11 months ago by dp0b • 20 • updated 2 hours ago by Gennady Khvorykh • 30
0
votes
1
answer
107
views
1
answer
Need earlier version of fastPHASE
fastphase written 17 days ago by Gennady Khvorykh • 30
0
votes
2
answers
173
views
2
answers
Bulk download of gene names NCBI
e-utilities written 1 day ago by T_18 • 0 • updated 3 hours ago by Renesh • 910
2
votes
1
answer
132
views
1
answer
entrez utilities: snp
snp written 5 hours ago by deepak.k.choubey • 10 • updated 3 hours ago by Pierre Lindenbaum ♦ 98k
0
votes
0
answers
66
views
0
answers
Improving existing assembly using PacBIo reads
assembly alignment tool sequencing written 4 hours ago by bhagyathimmappa • 0 • updated 4 hours ago by geek_y ♦ 8.0k
5
votes
1
answer
78
views
1
answer
Convert a FASTA Amino Acid Sequence to RNA (Reverse Central Dogma)
python sequence written 4 hours ago by incensefrenzie2006 • 0 • updated 4 hours ago by Rob ♦ 2.0k
1
vote
0
answers
106
views
0
answers
Different alignment rates for Hisat2 and STAR, Hisat2 has lower alignment rate and STAR have many multi aligned reads
rna-seq written 6 hours ago by Claireyingying • 0 • updated 4 hours ago by Satyajeet Khare • 1.0k
0
votes
0
answers
58
views
0
answers
biopython esearch not giving all children taxIDs
ncbi biopython entrez written 4 hours ago by yarmda • 0
0
votes
0
answers
54
views
0
answers
Tools for Saturation analysis and gene body coverage analysis
rna-seq written 4 hours ago by Javad • 0
3
votes
2
answers
443
views
2
answers
fastq-dump timeout exhausted error
sra written 4 months ago by bxia • 100 • updated 5 hours ago by samesense • 40
0
votes
0
answers
60
views
0
answers
R bioconductor in analysying methylation data
R written 7 hours ago by preethibagopi5 • 0 • updated 5 hours ago by Devon Ryan ♦ 70k
0
votes
1
answer
86
views
1
answer
Analyzing specific genes in a microarray (RNA expression)
bioconductor limma microarrays written 7 hours ago by Pol • 50 • updated 5 hours ago by h.mon ♦ 8.6k
<prev • 51,793 results • page 1 of 1727 • next >
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