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blast query coverage using perl
blast written 1 minute ago by sharmatina189059 • 0
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News: Course: Variant effect prediction, 31th October - 3th November 2017
news rna-seq written 1 hour ago by si.vanheel-vauhkala • 0 • updated 4 minutes ago by WouterDeCoster ♦ 20k
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ICGC control sample
next-gen written 8 minutes ago by banerjeeshayantan • 10
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14
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how to find position of mi-rna in corresponding EST? i have obtained similarity by blast2go ,i find difficult to find the position of mi-rna in EST?
alignment rna-seq written 15 minutes ago by krishnats19992 • 0
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114
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5 follow
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Enrichment analysis: Which tool I should trust?
enrichment tf annotation written 3 hours ago by agrandiadil • 10 • updated 32 minutes ago by vchris_ngs • 3.7k
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Tool: The Map of RNA Modifications from Epitranscriptome Sequencing Data and Disease Data
tool m5c m1a pseudouridine epitranscriptome m6a written 6 days ago by lsp03yjh • 460
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154
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Promoter sequence analysis
sequence blast written 3 days ago by mj2000 • 0 • updated 1 hour ago by Biostar ♦♦ 20
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2
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111
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6 follow
2
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Removal of PCR dupliactes from trimmed reads
duplicates samtools rmdup pre-processed reads written 4 hours ago by deepti1rao • 0 • updated 1 hour ago by genomax ♦ 32k
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Job: Sheffield Bioinformatics Core Analyst, The University of Sheffield, Sheffield, UK
bioinformatics core job analyst written 2 hours ago by mark.dunning • 170 • updated 1 hour ago by genomax ♦ 32k
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Tool: Multiplex PCR Primer Design Tools
tools multiplex pcr tool written 2 hours ago by Shicheng Guo • 4.4k • updated 1 hour ago by genomax ♦ 32k
3
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1
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169
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6 follow
1
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TF motif binding region searching script in human genome
motif logo written 9 weeks ago by Shicheng Guo • 4.4k
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54
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Merge CNVnator output of multiple samples
wgs tool cnv written 2 hours ago by zhang248 • 20
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3
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264
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5 follow
3
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weird insert size post trimming
rna-seq written 3 days ago by badribio • 160 • updated 2 hours ago by ATPoint • 700
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117 follow
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 8 months ago by Istvan Albert ♦♦ 73k • updated 2 hours ago by kenanh • 10
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242
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Rename headers of multiple fasta files inside loop
fasta pyfasta header gene bash written 2 days ago by bioinfo8 • 80
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270
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blast alignemnt query coverage
blast written 2 days ago by sharmatina189059 • 0 • updated 4 hours ago by geek_y ♦ 7.8k
2
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1
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3.4k
views
1
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Trouble With Tabix In Using Vcf Tools
tabix vcftools linux written 4.0 years ago by C00101 • 0 • updated 4 hours ago by bioscientist122 • 0
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67
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DiffBind: Counting reads in overlapping regions
R diffbind chip-seq written 4 hours ago by Roman Hillje • 20
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Tool: UMI-Tools 0.5, now with tools for cell barcoded scRNA-seq
umi rna-seq single cell tool written 4 hours ago by i.sudbery • 1.4k
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Denisovan and Altai Neanderthal .bed files?
snp written 4 hours ago by spiral01 • 60
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GESS exon skipping error
next-gen rna-seq written 4 hours ago by fk1qaz • 0 • updated 4 hours ago by WouterDeCoster ♦ 20k
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5 follow
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What softwares can detect fusion genes from SNP-array data?
snp array gene fusion written 4 hours ago by hiekeen • 0
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If i am interested in a transcription factor, why would i focus on coding and non coding SNPs?
enhancer promoter snp exon transcription written 2 days ago by mesencephalon • 0 • updated 4 hours ago by Emily_Ensembl ♦ 12k
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Remapping SNPs to new genome build (bovine/porcine)
genome mappging snp written 5 weeks ago by Barry Simpson • 0 • updated 4 hours ago by Emily_Ensembl ♦ 12k
2
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1
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79
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1
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Interproscan GO terms results explanation
genome gene written 7 hours ago by konstantinkul • 50 • updated 4 hours ago by Michael Dondrup ♦ 42k
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Use ANNOVAR to annotate SNPs
genome snp written 6 hours ago by zhang248 • 20
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1
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95
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samtools return seek position
bam samtools written 11 hours ago by peiqi1122 • 0 • updated 7 hours ago by Devon Ryan ♦ 70k
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1
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210
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1
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Any possible to run cuffdiff without cuffqunt?
software error next-gen rna-seq written 6 months ago by barrypraveen • 0 • updated 7 hours ago by Biostar ♦♦ 20
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Error in .normargSEW0(start, "start") : 'start' must be a numeric vector (or NULL)
R genomicranges written 7 hours ago by bisansamara • 0
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How to get the range of LOH?
cnvkit written 4 days ago by Tonny • 10 • updated 8 hours ago by Eric T. • 1.8k
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