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3
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2
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144
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Energy Minimization Result Problem
written 9 days ago by nehabharty123 • 20
12
votes
2
answers
380
views
2
answers
News: Early Bird Registration Closing Soon: Hands-On NGS Data Analysis Workshops 2014
news methylation rna-seq written 21 days ago by David Langenberger • 2.5k
2
votes
3
answers
62
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3
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If you have a chance to ask questions to the CEO of Illumina, what would you do?
illumina bioinformatics written 2 hours ago by zhuosong • 0
0
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0
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28
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0
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How does "missing" (3rd column) of sample file in SNPTEST affect the results?
sample file gwas snptest imputation missing written 1 hour ago by lanjinglingxiaoni • 0
2
votes
1
answer
539
views
1
answer
Sam Vs Lmfit(Limma)
limma microarray sam written 16 months ago by Julien Textoris • 410 • updated 2 hours ago by Biostar ♦♦ 0
1
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1
answer
53
views
1
answer
Retrieve all the differentially methylated cpg's in a region
cds methylation genomic regions transposons written 9 hours ago by Saad Murtaza Khan • 50 • updated 3 hours ago by Xingyu Yang • 160
5
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2
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123
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2
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Bwa mem is exiting with segmentation fault for large contigs (> 0.4Mbp)
software error alignment next-gen sequencing written 22 hours ago by purkantiramya • 0
86
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8
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5.3k
views
18 follow
8
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Forum: Will Python Take The Place Of R?
R forum python biopython statistics written 11 months ago by medhat.helmy77 • 2.1k • updated 4 hours ago by Chris Fields • 460
0
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answers
40
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0
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test Tophat ERROR
rna-seq written 5 hours ago by sjing2003 • 0
6
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2
answers
106
views
5 follow
2
answers
bam-readcount reports all reference bases as N
bam-readcount written 1 day ago by Chris F. • 10 • updated 6 hours ago by ernfrid • 10
3
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3
answers
880
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5 follow
3
answers
How To Convert A Fasta Or Alignment File To Nexus (.Nex) File That Is To Be Used In The Beast Program
written 8 months ago by triinlakspere • 0 • updated 6 hours ago by Prakki Rama • 350
0
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0
answers
48
views
0
answers
How to determine whether a secondary structure prediction is significant or relevant?
rna secondary structure written 13 hours ago by ericmajinglong • 70
1
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0
answers
100
views
0
answers
Cgat Tools Install Error
python written 8 weeks ago by liupfskygre • 80 • updated 8 hours ago by Biostar ♦♦ 0
0
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1
answer
54
views
1
answer
Limiting the decimals of intensity from SNP array in R
intensity decimals string numbers R written 11 hours ago by viniciushs88 • 50 • updated 9 hours ago by Devon Ryan ♦ 9.3k
3
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2
answers
74
views
2
answers
Specify Assembly for NCBI Entrez Query
ncbi entrez written 1 day ago by paulparsons • 20
17
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1
answer
515
views
1
answer
Tutorial: Annotating Tcga Mafs With The Latest Ensembl Transcripts
vcf somatic tutorial tcga maf ensembl written 12 weeks ago by Cyriac Kandoth • 1.6k
4
votes
2
answers
514
views
2
answers
Music Proximity Analysis Mutation Diagrams
music written 12 months ago by joel.ferstay • 10 • updated 10 hours ago by Christian • 710
9
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4
answers
479
views
5 follow
4
answers
Lolliplot Link On The Tvap Website
tools visualization written 7 months ago by zoppoli • 30 • updated 10 hours ago by Christian • 710
0
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0
answers
66
views
0
answers
Warnings and non-missing arguments in ggbio
ggbio ggplot2 genomic ranges written 13 hours ago by reviewer3 • 0
10
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2
answers
98
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5 follow
2
answers
VCF files: Change Chromosome Notation
sequence next-gen written 15 hours ago by Quak • 0 • updated 10 hours ago by vlaufer • 60
0
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0
answers
50
views
0
answers
j5 Golden Gate Assembly and Device Manager
golden gate assembly synthetic biology dna written 11 hours ago by willemveerman • 0
0
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0
answers
56
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0
answers
How to estimate depth of coverage for a windows size on genome?
doc depth of coverage written 11 hours ago by Chen Sun • 180
2
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1
answer
56
views
1
answer
Error occured when converting .SRA to FASTQ
software error alignment sequencing written 12 hours ago by xuzbnu • 0 • updated 12 hours ago by Xingyu Yang • 160
0
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0
answers
59
views
0
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SUM_MS field in Pindel, and unique supporting reads discrepancy
pindel written 1 day ago by volkansevim • 0
3
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3
answers
91
views
3
answers
Conversion tools for GWAS
genome gwas wide gwaas written 23 hours ago by danielestrife • 0
5
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1
answer
785
views
1
answer
A Error About Gatk Samfilereader Malformed
gatk bam written 20 months ago by huboqiang • 10 • updated 14 hours ago by Biostar ♦♦ 0
0
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0
answers
39
views
0
answers
EMBOSS Prophecy is giving different outputs for same input file
gribskov php-script emboss prophecy written 14 hours ago by aravind121 • 70
2
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1
answer
34
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1
answer
Forum: New feature: follow and unfollow posts via messages or email
forum biostar written 18 hours ago by Istvan Albert ♦♦ 39k • updated 14 hours ago by Christian • 710
0
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0
answers
44
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0
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how to do Mantel extension test for SNP allele frequency among different cohort or different batch or different chip
R snp mantel gwas written 15 hours ago by lanjinglingxiaoni • 0
6
votes
3
answers
357
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5 follow
3
answers
News: Illumina Nextseq 500 And Hiseq X Ten: Newer Tech Lowering Cost Per Mbp
news written 3 months ago by support • 120
3
votes
2
answers
103
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2
answers
Statistical tests for sanity check of expression data before inferring network
genome bioinformatics × sequencing written 23 hours ago by jack • 40 • updated 15 hours ago by andrew.j.skelton73 • 140
2
votes
2
answers
294
views
2
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Question About Gwas And Shared Controls.
gwas statistics written 21 months ago by bloodyangel.minus2 • 10 • updated 15 hours ago by lanjinglingxiaoni • 0
32
votes
13
answers
746
views
19 follow
13
answers
Forum: Biostar 2.0 released
forum biostar written 9 days ago by Istvan Albert ♦♦ 39k • updated 15 hours ago by Matt Shirley ♦ 3.5k
3
votes
1
answer
68
views
1
answer
How can I get the informaiton about base quality(BQ) in VCF file?
vcf bq snp written 16 hours ago by lanyuhao1991 • 10 • updated 16 hours ago by Deedee • 1.6k
40
votes
6
answers
7.6k
views
15 follow
6
answers
Tutorial: Piping With Samtools, Bwa And Bedtools
bedtools tutorial samtools unix bwa written 24 months ago by Ying W • 1.8k • updated 16 hours ago by Zee • 10
2
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2
answers
65
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2
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BioPython error parsing standard GenBank file
biopython written 23 hours ago by morgan.beeby • 0 • updated 16 hours ago by Peter ♦ 3.8k
5
votes
1
answer
53
views
1
answer
Is it good idea to use two different quatification methods from TCGA at same time ?
bioinformatics next-gen rna-seq tcga written 19 hours ago by jack • 40 • updated 16 hours ago by Charles Warden ♦ 2.3k
1
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0
answers
46
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0
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In blastclust, is score density based on bit score or score?
forum blast written 16 hours ago by evsmithx • 10 • updated 16 hours ago by Istvan Albert ♦♦ 39k
2
votes
1
answer
90
views
1
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Using parallel with Mem
mem parallel bwa written 19 hours ago by syednajeebashraf • 360 • updated 17 hours ago by Matt Shirley ♦ 3.5k
1
vote
1
answer
57
views
1
answer
VCFTools weir-fst-pop on haploid organisms
weir-fst-pop haploid vcftools fst written 18 hours ago by kawaiilain • 0 • updated 17 hours ago by akoik063 • 330
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