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Recent Replies
Comment: What is the best tool to recover nitrogen cycling genes from an annotated assemb
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I would say NCyc only because already include protein sequences from eggNOG and KEGG (kofamKoala):
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Comment: How to write out a ID and AA sequence from a SWISS PROT database file into a new
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Yes. Here is an example of the file. It is a few thousand lines long so I won't put the whole thing.
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ID 002L_FRG3G Revi…
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Thank you so much!
The codes you send working for 2 or 3 files but now I am dealing with memory error in R :(
I tried to set memory lim…
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This is an example of my main file (two SNP)
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Edit: Mark is right. You added new files to an existing library. Do you have the fasta files of the initial plant database?
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Have a look at this tutorial: [Identification and classification of the most influential nodes][1] and the related [manuscript][2].
[1]:…
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Use ``bcftools +fill-tags``, as ``vcftools`` is deprecated and should no longer be used.
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Hi Basti, no I wasn't able to get DMRcate to work like that. I put together my own function called dmrcaller() to look for runs of coregula…
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Thankyou .
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The **geo**metric **Means** are an attempt to dampen the effect of outliers/genes that are different between samples in order to find a fac…
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This is an awesome separation for clinical data, you will often just see a mess of points with no separation at all because of all the pote…
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`man sort`
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Thank you for your valuable time and explanation. Can you tell me how can i get the output in a format like seq0001 seq 00002 ...... and s…
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