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How does Trimmomatic work?
rna-seq written 11 minutes ago by mail.jyotim0
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3
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Forum: How to make a SRR download list
forum next-gen written 25 minutes ago by linlinli990130
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1
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How convert files .psl to files .bed?
.bed .psl awk written 1 hour ago by vaniagarciagonzalez0 • updated 1 hour ago by Alex Reynolds14k
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223
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7 follow
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50
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how to parse blast in biopython
python blast written 10 hours ago by Breilly9210 • updated 2 hours ago by Philipp Bayer3.3k
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17
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cell annotation question - rnaseq
rna-seq written 2 hours ago by Sheila150
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13
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57
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492
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6 follow
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useful and freely available softwares for Bioinformatics
software bioinformatics written 14 months ago by Mo610 • updated 4 hours ago by Biostar ♦♦ 0
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1
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63
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5 follow
1
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2
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1
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52
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1
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Does bowtie2 still require fastqsanger format?
chip-seq written 6 hours ago by bxia0 • updated 6 hours ago by Steven Lakin590
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1
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60
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1
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Few genes with many reads aligned,
alignment rna-seq written 13 hours ago by RNAseq0 • updated 7 hours ago by Devon Ryan49k
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1
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57
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1
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Primary_assembly and GRCh38.84.gtf.gz are the files for mapping?
chip-seq rna-seq written 10 hours ago by bxia0 • updated 7 hours ago by Denise - Ensembl1.4k
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61
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1
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Primer3 in Biopython
sequence written 11 hours ago by calyssa710 • updated 7 hours ago by piet790
3
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1
answer
104
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1
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SRA to fastq conversion, 2Gb to 11Gb
chip-seq rna-seq written 1 day ago by bxia0 • updated 8 hours ago by piet790
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49
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UCSC_TFBS option in DAVID
gene written 8 hours ago by Fereshteh840
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59
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1
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Fetching multiple FASTA from NCBI
ncbi efetch written 8 hours ago by mikael.lenz.strube10 • updated 8 hours ago by piet790
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7 follow
3
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7
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1
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58
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Paired end alignment issue
paired end tophat alignment bowtie sequencing written 9 hours ago by anjanaram150 • updated 8 hours ago by Antonio R, Franco2.4k
3
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1
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72
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1
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fasta to fastq
tophat nature rna-seq bowtie written 9 hours ago by luanabarbos0 • updated 9 hours ago by Antonio R, Franco2.4k
2
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1
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69
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1
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Public paired end chip seq dataset, both ChIP and input?
chip-seq written 11 hours ago by endrebak310 • updated 9 hours ago by Ar10
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42
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2
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93
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1
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347
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SOLiD Wildfire manual?
wildfire written 17 months ago by epistatic140 • updated 10 hours ago by Biostar ♦♦ 0
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2
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143
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52
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Adapter trimming in basespace
adapter general written 13 hours ago by kanwarjag640 • updated 12 hours ago by kirannbishwa0180
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Extracting heterozygous genotype from vcf file and compare 2 files
vcf snps genotype written 13 hours ago by priya0 • updated 12 hours ago by Dan Gaston5.8k
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1
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69
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1
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Annotation in ExpressionSet object
R expressionset written 23 hours ago by Na Sed160
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1
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57
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5 follow
1
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How to decide H3K27me3 peaks in promoter region
chip-seq written 1 day ago by izzy.yichao.cai20 • updated 13 hours ago by Sinji800
4
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322
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0
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2
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85
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5 follow
1
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1
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51
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cell surface receptor genes
gene written 14 hours ago by esu20010
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55
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T Coffee Commandline in Biopython
commandline python alignment written 14 hours ago by the_madinator10 • updated 14 hours ago by Ram8.8k
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53
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0
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8
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152
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8 follow
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Help selecting storage hardware for bioinformatics core facilities
nas storage hardware raid written 19 hours ago by jiacov50 • updated 15 hours ago by fanli.gcb260
4
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1
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78
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1
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aligning with bacterial genome
bacterial-genome rna-seq written 18 hours ago by HK10 • updated 15 hours ago by Antonio R, Franco2.4k
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Senior Research Fellow
software use written 16 hours ago by preeti.sh37870 • updated 15 hours ago by harrisarah030
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