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<prev • 15,662 results • page 1 of 627 • next >
2
votes
3
answers
40
views
3
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What is a repetitive region?
assembly sequence written 49 minutes ago by zhangz.cs • 0 • updated 3 minutes ago by Istvan Albert ♦♦ 38k
2
votes
1
answer
48
views
1
answer
Why to filter reads before mapping (bowtie2)?
bowtie2 mapping sequencing written 1 hour ago by Jan Hapala • 0 • updated 18 minutes ago by Deedee • 1.5k
1
vote
1
answer
28
views
1
answer
Spliting a dataframe based in a chromosome
R chr split written 46 minutes ago by viniciushs88 • 40 • updated 34 minutes ago by Chris Miller ♦ 12k
6
votes
2
answers
104
views
2
answers
How to find out what build a galaxy site is running
galaxy chip-seq rna-seq usegalaxy written 1 day ago by Ann • 250 • updated 44 minutes ago by emulatorer • 30
2
votes
2
answers
83
views
2
answers
Differential Expression Analysis clarifications
rna-seq differential expression written 15 hours ago by Robyn Edgar • 10 • updated 46 minutes ago by cwarden45 ♦ 2.2k
2
votes
1
answer
43
views
1
answer
Fraction of bases covered by each element in bed
R chip-seq tool written 2 hours ago by avinash.sahu • 0 • updated 47 minutes ago by Devon Ryan ♦ 9.1k
0
votes
0
answers
25
views
0
answers
Partial or complete overlap of two genomic ranges
R sequence grange written 1 hour ago by Jimbou • 80
3
votes
1
answer
70
views
1
answer
Pick random position from specific genomic regions
bed position random written 3 hours ago by Nicolas Rosewick • 2.4k • updated 1 hour ago by Devon Ryan ♦ 9.1k
5
votes
1
answer
107
views
5 follow
1
answer
How To Make A Proper Use Of Blocking In Limma Using Voom.
rnaseq limma written 14 days ago by catagui • 20 • updated 2 hours ago by julien.roux • 20
4
votes
3
answers
77
views
3
answers
error with bedtools slop
bedtools chip-seq written 6 hours ago by Samad • 30
0
votes
0
answers
55
views
0
answers
Applying a task to several files in R
R loop sapply lapply written 2 hours ago by viniciushs88 • 40
0
votes
0
answers
36
views
0
answers
An offline tool for adding hydrogen to a pdbx/mmcif structure
pdb protein structure mmcif hydrogens written 2 hours ago by Lukas Pravda • 20
23
votes
3
answers
1.2k
views
5 follow
3
answers
Picking Random Genomic Positions
perl bedtools bash written 21 months ago by Pgibas • 1.9k
10
votes
3
answers
1.7k
views
3
answers
How To Obtain Encode Tfbs Using The Ucsc Genome Browser
binding encode transcription written 3.0 years ago by Linda • 160 • updated 3 hours ago by Biostar ♦♦ 0
8
votes
1
answer
113
views
1
answer
List of np-hard problems in biology/bioinformatics
np-hard algorithm problem written 8 hours ago by 11cwicks • 50 • updated 5 hours ago by chrchang523 • 180
0
votes
0
answers
50
views
0
answers
Best way to map paired-end, uniquely mapped reads with Bowtie2?
paired-end chip-seq bowtie written 5 hours ago by Ian • 3.3k
2
votes
0
answers
63
views
0
answers
How to validate translocation detected in RNA-seq data?
next-gen rna-seq sequencing written 6 hours ago by alisaber814 • 20
0
votes
0
answers
249
views
0
answers
Tutorial: How To Separate Illumina Based Strand Specific Rna-Seq Alignments By Strand
tutorial rna-seq written 9 weeks ago by Istvan Albert ♦♦ 38k • updated 6 hours ago by stan • 0
0
votes
1
answer
45
views
1
answer
Length of Bases in Overlapping Regions Calculated By BEDOPS
bed written 7 hours ago by totti • 0 • updated 7 hours ago by Alex Reynolds ♦ 6.0k
0
votes
3
answers
140
views
3
answers
How To Find Upstream/Downstream Bound Features With A Chip-Seq Analysis In Galaxy
bioinformatics chip-seq written 4 weeks ago by lasse.kruse • 0 • updated 8 hours ago by Alex Reynolds ♦ 6.0k
1
vote
0
answers
478
views
5 follow
0
answers
Read Counts Difference From Different Tools
rnaseq written 14 months ago by camelbbs • 370 • updated 9 hours ago by Biostar ♦♦ 0
1
vote
3
answers
122
views
5 follow
3
answers
Where can i find some bacterial RNA-Seq data?
rna-seq bacterial written 15 hours ago by matija.sosic • 10 • updated 11 hours ago by Geek_y • 150
2
votes
3
answers
236
views
3
answers
Estimating Insert Size From Paired End Data.
picard paired-end alignment written 6 weeks ago by Geek_y • 150
4
votes
3
answers
139
views
5 follow
3
answers
How Do I Search A Genome For A Known Motif, And Get An Interval File Of All Instances Of The Motif?
motif chip-seq written 11 weeks ago by bede.portz • 300 • updated 12 hours ago by tangming2005 • 140
1
vote
3
answers
247
views
3
answers
Sra Format Questions: How To Get A Sam File That Can Be Converted To Bam?
sra samtools sam chip-seq written 9 weeks ago by bede.portz • 300 • updated 12 hours ago by tangming2005 • 140
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