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<prev • 61,086 results • page 1 of 2037 • next >
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Plotting the expression values for two genes in a range of cells
R ggplot2 written 28 minutes ago by Za • 40
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How can I produce gene level quantification using Salmon pseudo-aligner?
salmon rna-seq gene quantification written 1 day ago by Angelique • 0 • updated 14 minutes ago by stefanos.bamopoulos • 30
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my file do not have duplicates, but it still shows duplicate are not allow
R rna-seq written 2 hours ago by mikysyc2016 • 10 • updated 34 minutes ago by Ram ♦ 15k
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Visualizing exome Sequencing data for depth
sequencing written 3.3 years ago by ruhirai • 20 • updated 53 minutes ago by Biostar ♦♦ 20
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Trimming reads of Chipseq samples
alignment chip-seq written 2 hours ago by GK1610 • 30
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How to download all the complete genomes of a bacterium (eg E. coli, Mycobacterium tuberculosis etc) in the .gbk format from NCBI?
genome written 3 hours ago by savscosta • 0 • updated 2 hours ago by jrj.healey • 4.6k
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Best way to impute GWAS summary statistics
gwas imputation summary statistics genotyping written 3 hours ago by gradstudentNew • 10
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66
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Is there a perfect WGS dataset?
next-gen sequence written 5 hours ago by marongiu.luigi • 190 • updated 4 hours ago by Pierre Lindenbaum ♦ 108k
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Analysis of gene expression data
p-value written 5 hours ago by shivangi.agarwal800 • 10
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164 follow
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 18 months ago by Istvan Albert ♦♦ 77k • updated 5 hours ago by Vijay Lakhujani ♦ 2.5k
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41
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Processing ATAC-seq data after peak calling
peak calling sequencing written 6 hours ago by anais1396 • 10 • updated 5 hours ago by James Ashmore • 2.4k
3
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1
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360
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1
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association analysis with stratification
gwas population stratification written 12 months ago by alessandrotestori7 • 290 • updated 6 hours ago by Biostar ♦♦ 20
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80
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statistical analysis for the data
statistical analysis written 7 hours ago by shivangi.agarwal800 • 10
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48
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Input type array and Output type file, possible in CWL ?
cwl written 1 day ago by ttom • 170
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42
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Building a biologically meaningful design matrix for limma/voom in a large RNASeq experiment
confounding limma rna-seq voom written 9 hours ago by stefanos.bamopoulos • 30
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How to generate protein descriptors and drug molecular fingerprints?
descriptors molecular fingerprints written 9 hours ago by Misha • 0
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97
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5 follow
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Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 21 hours ago by egeulgen • 240
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71
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(Closed) changing of chromosome notation in CHROM columns of vcf file
next-gen snp written 11 hours ago by aarvaBioinfo • 0
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47
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What are the best tools for visualizing DNA methylation result?
methylation rrbs rna-seq written 11 hours ago by ahmad.moousavi • 40
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1
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Combined Tss Plots For Chip Seq Peaks
chip-seq written 4.3 years ago by aditi.qamra • 230 • updated 12 hours ago by Biostar ♦♦ 20
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123
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SOAPdenovo statistics output for Nx
n50 soapdenovo assembly nx l50 written 7 weeks ago by deepti1rao • 0 • updated 13 hours ago by toralmanvar • 350
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2
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69
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stringDB PPI network with Log fold change?
ppi string-db rna-seq written 6 days ago by abdurehmanb • 0 • updated 13 hours ago by liux.bio • 140
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82
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Mapping and annotating DNA binding regions from ChIP-Seq to nearby gene
annotation chip-seq written 1 day ago by oriolebaltimore • 60 • updated 13 hours ago by toralmanvar • 350
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2
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76
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minus integer copy number when using --purity for cnvkit
cnvkit written 3 days ago by xiaoqiaoliu • 0 • updated 14 hours ago by Eric T. • 2.2k
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92
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Merging public vcf files: <NON_REF> in ALT
vcf gatk bcf written 20 hours ago by jimkozubek • 10
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STREAM for identifying cell type
xcell rna-seq cell-type enrichment written 1 day ago by kanwarjag • 890 • updated 18 hours ago by Kevin Blighe ♦ 21k
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77
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Inferring genotype based on RNA sequnces
rna-seq snp written 2 days ago by omer.k • 20 • updated 18 hours ago by Kevin Blighe ♦ 21k
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3
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133
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5 follow
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Total number of genes in hg38
rna-seq written 1 day ago by Glory Basumata • 0 • updated 19 hours ago by WouterDeCoster ♦ 29k
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286
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CAI in python: SeqUtils.CodonUsage vs CAI package
sequtils codon biopython cai written 6 months ago by grassostefan • 0 • updated 19 hours ago by benjamindlee • 0
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How tximport work with gencode transcripts?
R rna-seq written 1 day ago by Sharon • 320 • updated 20 hours ago by Kevin Blighe ♦ 21k
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