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filter internal priming events in oligdT based Reverse transcription of 3'end library
rna-seq written 5 minutes ago by linjc.xmu • 10
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27
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Drug interaction not running in MAFtools
R maftools exome-seq snp written 4 hours ago by dodausp • 60
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136
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rsem-calculate-expression error SAM/BAM file declares more reference sequences than Rsem
rna-seq written 29 days ago by sbhattach2 • 0 • updated 1 hour ago by Biostar ♦♦ 20
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18
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Capillary sequence trimming algorithm
capillary sequencing written 2 hours ago by tospo • 40
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21
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Kallisto output giving average fragment lengths of zero(0)
kallisto rna-seq written 2 hours ago by hannyarko.hn • 0
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23
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Some confused question about running codeml of PAML
sequence written 3 hours ago by liangdong0309 • 0
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1
answer
49
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1
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Suggestions needed for mIRNA-human target prediction ?
gene next-gen rna-seq written 8 hours ago by k.kathirvel93 • 150 • updated 3 hours ago by Kevin Blighe ♦ 33k
2
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1
answer
1.5k
views
1
answer
Interpretation of TCGA clinical data
rna-seq written 2.4 years ago by bxia • 140 • updated 4 hours ago by kristoffer.vittingseerup • 1.0k
3
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2
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129
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5 follow
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Count the number of homozygous and heterozygous variants in VCF file
1000genomes allele awk count written 16 days ago by aadhirareddy1323 • 20
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46
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How to judge MSA from tree?
phylogeny alignment mafft muscle pfam written 4 hours ago by skvaller • 0
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28
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Deconvolution Method in Seurat and convert from SingleCellExperiment
R chip-seq seurat single cell rna-seq written 4 hours ago by hamza_karakurt • 0
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77
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Forum: (Closed) Omics Data Analysis: What keeps you up at night
forum dna-seq data analysis rna-seq data integration written 5 hours ago by p.hadjipanayiotou • 0
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79
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1
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How to change name of species in FASTA file with BioPython
fasta python help question biopython written 17 hours ago by Daphnia3000 • 0 • updated 5 hours ago by gb • 520
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27
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how to add gene name in cluego?
cluego network genes cytoscape written 5 hours ago by BioNoobie • 10
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17
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31k
views
186 follow
17
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 2.0 years ago by Istvan Albert ♦♦ 78k • updated 5 hours ago by africainterpol101 • 0
11
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1
answer
195
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7 follow
1
answer
FPKM quantile normalization
flux balance analysis normalization rna-seq written 2 days ago by Maryam • 40
1
vote
1
answer
41
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1
answer
Concatenating metagenome samples
genome assembly metagenome concatenate written 22 hours ago by jess_palmer • 10 • updated 6 hours ago by Carambakaracho • 630
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37
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Subread and featurecounts read index and annotation once for all
alignment featurecounts rna-seq written 7 hours ago by bharata1803 • 390
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96
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Forum: (Closed) Biostar Bioinformatics textbooks
gene assembly forum alignment written 2 days ago by Charles Olweny • 0 • updated 7 hours ago by mosesbrodin99 • 0
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1
answer
258
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1
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get different heatmap from website and R
R excel clustering heatmap written 8 weeks ago by ebrahimi.re67 • 0 • updated 7 hours ago by Biostar ♦♦ 20
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42
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(Closed) Data download from Roadmap
roadmap written 8 hours ago by Uday Rangaswamy • 60
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47
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Interpreting mapping contaminants
alignment written 16 hours ago by cecilio11 • 20 • updated 8 hours ago by finswimmer ♦ 8.0k
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638
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Error using bwasw (bwa 0.7.15-r1140): bwtsw2_pair.c line 122: failed to allocate memory
alignment dna-seq bwa written 17 months ago by azaharamft • 0 • updated 8 hours ago by finswimmer ♦ 8.0k
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43
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How to rectify mirdeep.pl error?
mirdeep2.pl written 9 hours ago by nivya.james2016 • 0 • updated 9 hours ago by finswimmer ♦ 8.0k
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38
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How to reduce the contig number and errorprone messages in denovo assembly using SPAdes?
assembly written 10 hours ago by sangita.sarma71991 • 0 • updated 9 hours ago by Vijay Lakhujani ♦ 3.4k
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58
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GATK 4 Mutect2 gives too much low depth variants
mutect written 9 hours ago by Zhizhong • 230
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53
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How to select one gene at a CpG site?
gene assembly written 12 hours ago by hansong798 • 0
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41
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0
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TargetScan search for miR-10b-5p
data written 10 hours ago by landscape95 • 140
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1
answer
67
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1
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Which tool can remove SignalP predicted signal peptides from FASTA file?
sequence written 23 hours ago by arman.vinck • 0 • updated 13 hours ago by vkkodali • 600
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1
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71
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1
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regarding driver genes
gene written 20 hours ago by sana777munquad • 0 • updated 14 hours ago by Kevin Blighe ♦ 33k
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