updated 8 hours ago by
Istvan Albert
88k
•
written 1 day ago by
Leendert
▴
10
6
votes
4
replies
194
views
0
votes
4
replies
152
views
updated 10 hours ago by
Hyper_Odin
▴
90
•
written 1 day ago by
Bioinformatics1
•
0
0
votes
0
replies
96
views
1
vote
2
replies
90
views
2 hours ago by
sa.youssef
•
0
1
vote
0
replies
69
views
updated 1 day ago by
Kevin Blighe
75k
•
written 1 day ago by
Alexander
▴
20
0
votes
1
reply
64
views
updated 23 hours ago by
Nitin Narwade
▴
860
•
written 1 day ago by
bioinf.questions
•
0
2
votes
6
replies
265
views
updated 1 day ago by
Hyper_Odin
▴
90
•
written 2 days ago by
Noah E.
▴
20
0
votes
0
replies
41
views
1 day ago by
lenC_biotecLover
▴
40
0
votes
1
reply
135
views
updated 1 day ago by
Kevin Blighe
75k
•
written 1 day ago by
luffy
▴
20
0
votes
4
replies
219
views
0
votes
1
reply
893
views
updated 1 day ago by
Jng
•
0
•
written 4.0 years ago by
dominik.saburo
•
0
0
votes
1
reply
112
views
2
votes
1
reply
104
views
updated 1 day ago by
Mensur Dlakic
★
12k
•
written 1 day ago by
DNAngel
▴
180
0
votes
0
replies
45
views
0
votes
0
replies
49
views
1 day ago by
jhy
•
0
0
votes
0
replies
42
views
1 day ago by
selplat21
▴
20
2
votes
5
replies
318
views
updated 1 day ago by
zengjingyu
▴
10
•
written 4 days ago by
Nahid Bandi K
•
0
9
votes
7
replies
5.4k
views
updated 1 day ago by
Yasha
•
0
•
written 6.9 years ago by
Nikleotide
▴
130
0
votes
0
replies
61
views
0
votes
1
reply
69
views
updated 1 day ago by
Hyper_Odin
▴
90
•
written 1 day ago by
from the mountains
▴
140
2
votes
1
reply
79
views
2 days ago by
A. Domingues
★
2.5k
0
votes
2
replies
105
views
1
vote
4
replies
152
views
1
vote
0
replies
48
views
1
vote
4
replies
190
views
1 day ago by
pinheirofabiano
•
0
1
vote
13
replies
355
views
3
votes
2
replies
240
views
updated 2 days ago by
rodolfo.peacewalker
▴
220
•
written 2 days ago by
skjw1029
▴
30
0
votes
0
replies
151
views
0
votes
0
replies
42
views
2 days ago by
enh
•
0
0
votes
2
replies
122
views
1
vote
2
replies
119
views
updated 2 days ago by
GenoMax
104k
•
written 2 days ago by
peter.berry5
▴
20
0
votes
4
replies
133
views
updated 1 day ago by
Kevin Blighe
75k
•
written 2 days ago by
gonzalezb549
•
0
1
vote
3
replies
182
views
0
votes
9
replies
374
views
19 hours ago by
Bioinformatics1
•
0
1
vote
1
reply
84
views
updated 2 days ago by
chrchang523
8.2k
•
written 2 days ago by
Michal Nevo
▴
20
0
votes
0
replies
49
views
1 hour ago by
fionajcunningham
•
0
1
vote
2
replies
84
views
updated 2 days ago by
GenoMax
104k
•
written 2 days ago by
kperlejewski
•
0
1
vote
4
replies
169
views
12
votes
15
replies
2.6k
views
8 follow
0
votes
4
replies
264
views
2
votes
2
replies
98
views
8
votes
5
replies
3.4k
views
updated 2 days ago by
s.awasthy
▴
10
•
written 23 months ago by
Shicheng Guo
★
8.7k
0
votes
3
replies
290
views
3
votes
4
replies
159
views
0
votes
0
replies
51
views
0
votes
2
replies
105
views
3
votes
2
replies
167
views
0
votes
0
replies
43
views
Recent Votes
Recent Locations •
All
United States, 7 minutes ago
Egypt, 7 minutes ago
United States, 10 minutes ago
USA, 10 minutes ago
Brazil, 11 minutes ago
Romania, 12 minutes ago
United Kingdom, 13 minutes ago
Recent Awards •
All
Teacher to
WouterDeCoster
45k
Teacher to
Kevin Blighe
75k
Scholar to
Mensur Dlakic
★
12k
Popular Question to
irfanwustl
▴
20
Teacher to
Istvan Albert
88k
Popular Question to
finswimmer
14k
Recent Replies
Answer: Would this laptop be sufficient for small dataset/sequence analysis?
by
Mensur Dlakic
★
12k
16 GB of RAM will not cut it for any serious bioinformatics application these days. Doubly so if you choose to run Windows.
Comment: inquiry related to snpsift
by
Kevin Blighe
75k
I see - thanks. I am not sure that `SnpSift annotate` can do this, but you can first remove the original ID via `bcftools`, as follows:
…
Answer: Forum: Job opportunities in Europe, with and without a PhD
by
Kevin Blighe
75k
South Africa? - very nice. I had been considering moving there, would you believe.
There is no correct answer to your question, and one ca…
Comment: inquiry related to snpsift
by
rheab1230
•
0
the command:
java -jar SnpSift.jar annotate dbSnp144.vcf variants.vcf > variants_annotated.vcf
I am getting no error.
the input file …
Comment: Displaying points which fall outside of the plot window in EnhancedVolcano
by
os306
▴
10
Hi there, just to follow up on this, I used your package to generate my volcano plots and got exactly what I was looking for. I now wish to…
Comment: inquiry related to snpsift
by
Kevin Blighe
75k
Hi, please show:
1. the command(s) that you are using
2. a sample of your input data
3. a sample of your output data
4. any status, wa…
Comment: opening downloaded files from STRING protein network without R
by
fionajcunningham
•
0
thanks GenoMax I will try this sorry for delay in reply!!
Fiona
Comment: What's the biggest thing you dislike about bioinformatics?
by
WouterDeCoster
45k
The alternative, constant off-by-one errors, aren't my idea of fun either :-)
Comment: Removing genes of Seurat object during integration pipeline
by
Stevens
•
0
Yeah, you can filter min_cells in Seurat with SCtransform. That would probably change the gene numbers in the SCT assay of the object. I u…
Comment: Removing genes of Seurat object during integration pipeline
by
ATpoint
52k
Doesn't sctransform has a `min_cells` parameter that you could use here? It will only consider genes detected in at least `min_cells` cells…
Comment: Removing genes of Seurat object during integration pipeline
by
Stevens
•
0
I was thinking of making it an arbitrary cut off of 10 cells, Seurat's documentation uses 3 for reading in a single sample. I believe that …
Answer: How To Split A Bam File By Chromosome
by
etiennedanis
•
0
With samtools v1.11, ```samtools view -b in.bam chr1 > out.bam``` did not work for me.
But ```samtools view -b in.bam 1 > out.bam``` wo…
Comment: Removing genes of Seurat object during integration pipeline
by
ATpoint
52k
What is a "few" cells? So how many? You would need to manually calculate the fraction of cells expressing a certain gene. Not sure in which…
Comment: I want to make a graph for conserved regions
by
sa.youssef
•
0
Thanks so much, it is a great suggestion. may I ask you if you know a way to visualize the results of these data in my report? as we are wo…
Comment: Minfi - estimateCellCounts
by
Papyrus
★
1.1k
I understand that you have whole blood samples and that's why you expect them to have more granulocytes? You could also try the [ENmix][1] …
Traffic: 1322 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6