Moderator: ATpoint
ATpoint ♦ 28k
- Reputation:
- 27,770
- Status:
- Trusted
- Location:
- Germany
- Last seen:
- 15 minutes ago
- Joined:
- 3 years, 9 months ago
- Email:
- a*********@gmail.com
does not work is not a valid error message!
Posts by ATpoint
<prev
• 3,942 results •
page 1 of 395 •
next >
0
votes
1
answer
1.1k
views
1
answers
Answer:
C: RSEM installation Errors
... You can always install via conda if compilation fails: https://anaconda.org/bioconda/rsem
This does not solve the compilation problem itself but saves you time to focus on what is important: Your analysis. ...
written 1 hour ago by
ATpoint ♦ 28k
0
votes
0
answers
18
views
0
answers
Comment:
C: mouse oncogene database
...
Hello Sara!
Questions similar to yours can already be found at:
database for mouse tumor supressor genes and oncogenes
We have closed your question to allow us to keep similar content in the same thread.
If you disagree with this please tell us why in a reply below. We'll be ha ...
written 2 hours ago by
ATpoint ♦ 28k
0
votes
1
answer
43
views
1
answers
Comment:
C: RNA seq analysis; two samples
... Please use the search function and google for advice on experiments without replicates. There are literally dozens of threads on this. Also check the manuals of the established tools, most have a section that covers it. ...
written 2 hours ago by
ATpoint ♦ 28k
1
vote
1
answer
103
views
1
answers
... There is a kallisto user group https://groups.google.com/forum/#!forum/kallisto-and-applications where you could ask for expert clarification, just fyi. ...
written 3 hours ago by
ATpoint ♦ 28k
0
votes
1
answer
103
views
1
answers
... Are they aligned to cDNA? I always quantify against the entire transcriptome (with salmon/alevin though). THere is no strict rule that only coding transcripts must be used. Differential regulation of ncRNAs might/is/can-be biologically meaningful as well. I would exclude small RNAs though before DEG ...
written 5 hours ago by
ATpoint ♦ 28k
1
vote
1
answer
47
views
1
answers
... I would get my hands on RNA-seq data from the cell type you are working on and then eliminate factors lowly-expressed in this cell type. Proteomics data would of course be more precise. You can also try to perform some kind of correlation analysis if you get your hands on larger (many samples) datas ...
written 6 hours ago by
ATpoint ♦ 28k
0
votes
0
answers
52
views
0
answers
... Can't you construct a dummy cDNA and feed this into PrimerBLAST? If exonB is skipped then make a sequence that does not contain it. This still would have all the benefits from PrimerBLAST which you need for a reliable qPCR primer. ...
written 7 hours ago by
ATpoint ♦ 28k
0
votes
0
answers
64
views
0
answers
... Please a representative input an output example. People are typically relucant to go through multiple lines of your just tounderstand the problem. A good illustration always helps. ...
written 7 hours ago by
ATpoint ♦ 28k
0
votes
1
answer
89
views
1
answers
... If you aim to promote your tool, please make a `Tool` post. OPs question is not about this. I will therefore move it to comment. Please do not advertise your tool if it doesn't add to the question. ...
written 7 hours ago by
ATpoint ♦ 28k
0
votes
2
answers
220
views
2
answers
... Our of interest, is there a reference for normalizing per-million scaled data with QN rather than raw counts? From what I understand, e.g. [here][1], one starts typically from integers, no? Or doesn't it make a difference? Not a statistician myself at all as you can see, so correct me if wrong.
htt ...
written 7 hours ago by
ATpoint ♦ 28k
Latest awards to ATpoint
Appreciated
7 hours ago,
created a post with more than 5 votes.
For C: Detect repeats problematic for PCR
Scholar
22 hours ago,
created an answer that has been accepted.
For C: Does BWA mem work with uBAM file?
Teacher
5 days ago,
created an answer with at least 3 up-votes.
For C: Does BWA mem work with uBAM file?
Teacher
5 days ago,
created an answer with at least 3 up-votes.
For C: Does BWA mem work with uBAM file?
Teacher
5 days ago,
created an answer with at least 3 up-votes.
For C: Does BWA mem work with uBAM file?
Scholar
7 days ago,
created an answer that has been accepted.
For C: Does BWA mem work with uBAM file?
Teacher
8 days ago,
created an answer with at least 3 up-votes.
For C: Does BWA mem work with uBAM file?
Scholar
8 days ago,
created an answer that has been accepted.
For C: Does BWA mem work with uBAM file?
Good Answer
9 days ago,
created an answer that was upvoted at least 5 times.
For C: Detect repeats problematic for PCR
Teacher
10 days ago,
created an answer with at least 3 up-votes.
For C: Does BWA mem work with uBAM file?
Appreciated
12 days ago,
created a post with more than 5 votes.
For C: Detect repeats problematic for PCR
Scholar
13 days ago,
created an answer that has been accepted.
For C: Does BWA mem work with uBAM file?
Teacher
14 days ago,
created an answer with at least 3 up-votes.
For C: Does BWA mem work with uBAM file?
Scholar
14 days ago,
created an answer that has been accepted.
For C: Does BWA mem work with uBAM file?
Epic Question
14 days ago,
created a question with more than 10,000 views.
For Fast download of FASTQ files from the European Nucleotide Archive (ENA)
Commentator
15 days ago,
created a comment with at least 3 up-votes.
For C: How to justify the proteins by their pathways in the discussion for research pap
Scholar
17 days ago,
created an answer that has been accepted.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Teacher
17 days ago,
created an answer with at least 3 up-votes.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Scholar
17 days ago,
created an answer that has been accepted.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Teacher
18 days ago,
created an answer with at least 3 up-votes.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Scholar
19 days ago,
created an answer that has been accepted.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Teacher
20 days ago,
created an answer with at least 3 up-votes.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Scholar
20 days ago,
created an answer that has been accepted.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Teacher
4 weeks ago,
created an answer with at least 3 up-votes.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Scholar
4 weeks ago,
created an answer that has been accepted.
For C: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but al
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1952 users visited in the last hour