Moderator: Arup Ghosh

gravatar for Arup Ghosh
Arup Ghosh2.7k
Reputation:
2,730
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Trusted
Location:
India
Website:
https://arup.dev/
Twitter:
arupgsh
Scholar ID:
Google Scholar Page
Last seen:
14 hours ago
Joined:
5 years, 1 month ago
Email:
a*******@gmail.com

PhD student @ Institute of Life Science, Bhubaneswar

Posts by Arup Ghosh

<prev • 373 results • page 1 of 38 • next >
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Comment: C: trim_galore: Unable to create directory File exists
... The output directory already exists or created by `trim_galore`? Also, have you tried to run the script without specifying the output directory? ...
written 9 days ago by Arup Ghosh2.7k
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Comment: C: how to run torrent variant caller on command line ?
... The software installation procedure is already mentioned in the documentation. ...
written 11 days ago by Arup Ghosh2.7k
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Comment: C: Epi2me Lab on Windows 10
... Have you tried Epi2me windows binary? https://github.com/epi2me-labs/labslauncher/releases/download/v1.0.3/ont-epi2melabs-installer-v1.0.3-win10.exe ...
written 29 days ago by Arup Ghosh2.7k
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Comment: C: Trimming reads using ivar - assembly of sars-cov-2 genome
... Inspect the ivar processed bam files in IGV or other genome browsers and also check ivar the log file. ...
written 4 weeks ago by Arup Ghosh2.7k
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Comment: C: Annotate Affymetrix probesets to Gene symbols
... Please start a new thread, with your question. ...
written 4 weeks ago by Arup Ghosh2.7k
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Comment: C: Plotting ridge classifier python
... Check the scikit learn documentation or related forums for help. https://scikit-learn.org/stable/auto_examples/model_selection/plot_learning_curve.html ...
written 4 weeks ago by Arup Ghosh2.7k
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Comment: C: Plotting ridge classifier python
... Hello RiccPicc! We believe that this post does not fit the main topic of this site. For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with. If you disagree please tell us why in a reply below, we'll be happy to talk a ...
written 4 weeks ago by Arup Ghosh2.7k
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Comment: C: Mapping illumina seq reads to bacterial reference genome.
... If you are not sure about the organism try classifying the reads with [Kraken2][1]. [1]: https://github.com/DerrickWood/kraken2/wiki ...
written 4 weeks ago by Arup Ghosh2.7k
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Comment: C: Mapping illumina seq reads to bacterial reference genome.
... You want to map the reads to the reference genome or generate a de novo assembly from the raw sequencing data? ...
written 4 weeks ago by Arup Ghosh2.7k
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Comment: C: finding the taxonomy ID for C. griseus (Chinese Hamster) for use with Stringdb p
... You have stored the query output in `string_db` and trying to access information from `string_bd`. ...
written 6 weeks ago by Arup Ghosh2.7k

Latest awards to Arup Ghosh

Scholar 3 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Good Answer 5 months ago, created an answer that was upvoted at least 5 times. For A: How to use Biopython for fetching metadata of NCBI/GenBank/RefSeq assembly ident
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Teacher 7 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Scholar 7 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Scholar 7 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Scholar 7 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Scholar 9 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Scholar 10 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Teacher 11 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Popular Question 11 months ago, created a question with more than 1,000 views. For Seurat vs Monocle
Teacher 11 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Commentator 14 months ago, created a comment with at least 3 up-votes. For C: Errors with SRA-toolkit: not enough space on the disk. (112)
Scholar 15 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Commentator 15 months ago, created a comment with at least 3 up-votes. For C: Errors with SRA-toolkit: not enough space on the disk. (112)
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Teacher 16 months ago, created an answer with at least 3 up-votes. For A: scatter plot in ggplot2 two colour for two different condition
Scholar 16 months ago, created an answer that has been accepted. For A: How can I uninstall my packages in Rstudio
Teacher 16 months ago, created an answer with at least 3 up-votes. For A: Visualising BedGraph files on UCSC [custom tracks]
Scholar 16 months ago, created an answer that has been accepted. For A: scatter plot in ggplot2 two colour for two different condition
Good Answer 16 months ago, created an answer that was upvoted at least 5 times. For A: How to use Biopython for fetching metadata of NCBI/GenBank/RefSeq assembly ident

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