Moderator: RamRS

gravatar for RamRS
RamRS27k
Reputation:
26,590
Status:
Trusted
Location:
Houston, TX
Twitter:
@_RamRS
Scholar ID:
Google Scholar Page
Last seen:
58 minutes ago
Joined:
6 years, 10 months ago
Email:
r****@nyu.edu

Bioinformatician turned Microsoft technologies developer turned bioinformatician. I love messing with text. UNIX>R>Python>Perl programmer, Excel pro, master Googler, database expert. 

I'm an amateur biologist interested in translational human genetics and healthcare.

Posts by RamRS

<prev • 5,745 results • page 1 of 575 • next >
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Comment: C: Repost: Quality of RNA Seq Data
... Hello ashwin.koppayi! Questions similar to yours can already be found at: - [Quality of RNA Seq data](/p/438603/) We have closed your question to allow us to keep similar content in the same thread. If you disagree with this please tell us why in a reply below. We'll be happy to talk about it. ...
written 3 hours ago by RamRS27k
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Comment: C: Different option in running BWA-MEM
... Hello nguyenhy258! It appears that your post has been cross-posted to another site: https://bioinformatics.stackexchange.com/questions/13328/different-options-in-running-bwa-mem This is typically not recommended as it runs the risk of annoying people in both communities. ...
written 4 days ago by RamRS27k
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Comment: C: Efetch extracting large fasta data from positon
... If an answer was helpful, you should upvote it; if the answer resolved your question, you should mark it as accepted. You can accept more than one answer if they all work. ![Upvote|Bookmark|Accept][1] [1]: https://image.ibb.co/dfsqrx/upvote_accept_bookmark.png ...
written 4 days ago by RamRS27k
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Comment: C: What are the benefits of using Linux system for Bioinformatics?
... Hello Eugenie! There are plenty of posts discussing Linux and bioinformatics both here and elsewhere on the web. Please use search/Google liberally. For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with. If you disagre ...
written 5 days ago by RamRS27k
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Comment: C: custom cluster or split heatmap?
... ComplexHeatmap gives you options to split rows and cluster within each split. Please read the manual section `heatmap-split` It also allows you to get row order. Read section `Set row and column orders`. Please always read the manual well before asking for help. There is no need for the `software- ...
written 5 days ago by RamRS27k
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Comment: C: barplot is missing in png file after saving
... You should use `ggsave`. It will give you a lot more control than using RStudio. Even in Rstudio export, you should be able to specify plot dimensions. ...
written 5 days ago by RamRS27k
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Comment: C: log2 RSEM data
... If you're running this on a galaxy server, a better place to ask questions would be https://help.galaxyproject.org/ Also, please use the formatting bar (especially the `code` option) to present your post better. You can use backticks for inline code (`text` becomes `text`), or select a chunk of tex ...
written 5 days ago by RamRS27k
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Comment: C: Split Vcf File Into Snps And Indels
... Please do not add an answer unless it answers the top level post. This post is better suited as a comment, and I am moving it to one. ...
written 5 days ago by RamRS27k
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Comment: C: barplot is missing in png file after saving
... Sorry, what? How are you saving as pdf? Are you using the `pdf(); ... dev.off()` method or the `ggsave()` function? ...
written 5 days ago by RamRS27k
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Comment: C: gnoMAD mutation and essential gene
... Genes are never lethal. If expressing a gene killed the organism, evolution would select against that gene. I think you're referring to the comments you received on your previous question, where a metric measuring how tolerant a gene is to protein truncating variants is used as a measure of how "cri ...
written 5 days ago by RamRS27k

Latest awards to RamRS

Popular Question 5 days ago, created a question with more than 1,000 views. For Meta: Should accepting your own answers multiple times get you points each time?
Popular Question 9 days ago, created a question with more than 1,000 views. For Meta: Should accepting your own answers multiple times get you points each time?
Scholar 11 days ago, created an answer that has been accepted. For A: Convert article title to pubmed ID
Scholar 11 days ago, created an answer that has been accepted. For A: Convert article title to pubmed ID
Scholar 12 days ago, created an answer that has been accepted. For A: Problem using a custom blast database in tblastx
Librarian 13 days ago, created a post with more than 10 bookmarks. For How to add images to a Biostars post
Great Question 20 days ago, created a question with more than 5,000 views. For Beware the differences between /bin/sh and /bin/bash
Teacher 25 days ago, created an answer with at least 3 up-votes. For A: Problem using a custom blast database in tblastx
Scholar 25 days ago, created an answer that has been accepted. For A: Problem using a custom blast database in tblastx
Teacher 5 weeks ago, created an answer with at least 3 up-votes. For A: Problem using a custom blast database in tblastx
Scholar 8 weeks ago, created an answer that has been accepted. For C: How to cite datasets downloaded from Ensembl?
Scholar 10 weeks ago, created an answer that has been accepted. For C: How to cite datasets downloaded from Ensembl?
Commentator 10 weeks ago, created a comment with at least 3 up-votes. For A: What are the 2 main justifications (or types of experiments) for collecting RNA-
Teacher 11 weeks ago, created an answer with at least 3 up-votes. For C: How to cite datasets downloaded from Ensembl?
Scholar 3 months ago, created an answer that has been accepted. For C: How to get gene annotation for a list of genes
Appreciated 3 months ago, created a post with more than 5 votes. For Meta: Markdown in Biostars (now enabled)
Commentator 3 months ago, created a comment with at least 3 up-votes. For A: What are the 2 main justifications (or types of experiments) for collecting RNA-
Commentator 3 months ago, created a comment with at least 3 up-votes. For A: What are the 2 main justifications (or types of experiments) for collecting RNA-
Commentator 3 months ago, created a comment with at least 3 up-votes. For A: What are the 2 main justifications (or types of experiments) for collecting RNA-
Commentator 3 months ago, created a comment with at least 3 up-votes. For A: What are the 2 main justifications (or types of experiments) for collecting RNA-
Popular Question 4 months ago, created a question with more than 1,000 views. For Meta: Should accepting your own answers multiple times get you points each time?
Popular Question 4 months ago, created a question with more than 1,000 views. For Meta: Should accepting your own answers multiple times get you points each time?
Popular Question 4 months ago, created a question with more than 1,000 views. For Meta: Should accepting your own answers multiple times get you points each time?
Good Answer 4 months ago, created an answer that was upvoted at least 5 times. For A: Where can I download the blast version that includes formatdb ?

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