Moderator: Ram

gravatar for Ram
Ram11k
Reputation:
10,510
Status:
Trusted
Location:
New York
Twitter:
@_RamRS
Scholar ID:
Google Scholar Page
Last seen:
3 hours ago
Joined:
3 years, 6 months ago
Email:
r****@nyu.edu

Bioinformatician turned Microsoft technologies developer turned bioinformatician. I love messing with text. UNIX/Perl/Python/R programmer, Excel pro, master Googler, database expert. 

I'm an amateur biologist interested in translational human genetics and healthcare.

Twitter: @_ramrs

Posts by Ram

<prev • 2,258 results • page 1 of 226 • next >
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Comment: C: How to count occurrence of numbers in text files using phython
... 1. Why does the post have a `writelines` (whatever that means) and an `excel` tag? 2. Please avoid white spaces in file/folder names. Also, use Linux based OS whenever possible. You will also need to mention why you're doing this, and how your input file differentiates between peptides. ...
written 12 hours ago by Ram11k
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Comment: C: Master after Pharmacy
... Hello spirosmour! We believe that this post does not fit the main topic of this site. Doesn't look like this question is related to bioinformatics. Please let me know if I'm mistaken. For this reason we have closed your question. This allows us to keep the site focused on the topics that the com ...
written 1 day ago by Ram11k
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Comment: C: Bioinformatics for food science
... Food biotechnology, as far as I know is a HUGE field, second to healthcare in its breadth. Many companies, including Dow Agro, NCGR and Monsanto have regular openings for bioinformatics folks. I'm guessing it's quite a new type of challenge, given the polyploidy in most crops. ...
written 5 days ago by Ram11k
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Comment: C: How can I find SRA MD5 checksums for FASTQ files?
... Thank you, https://www.biostars.org/u/18713/ ! ...
written 6 days ago by Ram11k
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Comment: C: How can I find SRA MD5 checksums for FASQ files?
... OP has not been seen in 16 months. I request a mod to review the answers and pick accepted answers among them. ...
written 6 days ago by Ram11k
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Comment: C: Annotate columns with chrom start_end
... https://www.biostars.org/u/27293/ , please do what Pierre's comment above (https://www.biostars.org/p/231834/#231846) advises you to. Thank you. ...
written 7 days ago by Ram11k
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Comment: C: Find raw sequencing data used in the articles ?
... I see. But does Nature store the data on their servers? ...
written 10 days ago by Ram11k
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Comment: C: How to Plot mutants of one gene against mutations in other genes?
... This looks like a scatter plot to me, with each point customized based on its attributes. Maybe start from there and expand as you go? ...
written 11 days ago by Ram11k
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Answer: A: Find raw sequencing data used in the articles
... Unless the authors mention the repository location (such as an SRA or GEO identifier), you will have to contact them. They may be willing to share data with you subject to conditions. For example, if you were to request data from us, we would anonymize identifiers and then pre-process them a bit bef ...
written 11 days ago by Ram11k
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Comment: C: Google TCGA data portal
... How's the `R` tag relevant here? Also, SQL is quite interesting to learn as a language and a way of thinking, so I think this is a good opportunity for you to start :) ...
written 12 days ago by Ram11k

Latest awards to Ram

Teacher 5 days ago, created an answer with at least 3 up-votes. For A: Problem using a custom blast database in tblastx
Popular Question 10 days ago, created a question with more than 1,000 views. For Duplicate @Sq Lines In Sam File Header
Scholar 11 days ago, created an answer that has been accepted. For A: Problem using a custom blast database in tblastx
Teacher 11 days ago, created an answer with at least 3 up-votes. For A: Problem using a custom blast database in tblastx
Popular Question 12 days ago, created a question with more than 1,000 views. For Duplicate @Sq Lines In Sam File Header
Popular Question 19 days ago, created a question with more than 1,000 views. For Duplicate @Sq Lines In Sam File Header
Commentator 5 weeks ago, created a comment with at least 3 up-votes. For C: Cuffdiff input error
Commentator 5 weeks ago, created a comment with at least 3 up-votes. For C: Cuffdiff input error
Commentator 6 weeks ago, created a comment with at least 3 up-votes. For C: Cuffdiff input error
Cylon 10 weeks ago, received 1,000 up votes.
Scholar 10 weeks ago, created an answer that has been accepted. For A: How do I ask a question on Biostars?
Commentator 10 weeks ago, created a comment with at least 3 up-votes. For C: Next Generation Sequencing
Scholar 11 weeks ago, created an answer that has been accepted. For A: How do I ask a question on Biostars?
Teacher 3 months ago, created an answer with at least 3 up-votes. For A: How do I ask a question on Biostars?
Popular Question 3 months ago, created a question with more than 1,000 views. For Check if REF allele is minor allele in any variant
Teacher 3 months ago, created an answer with at least 3 up-votes. For A: How do I ask a question on Biostars?
Commentator 3 months ago, created a comment with at least 3 up-votes. For C: Next Generation Sequencing
Scholar 4 months ago, created an answer that has been accepted. For A: How do I ask a question on Biostars?
Popular Question 5 months ago, created a question with more than 1,000 views. For Check if REF allele is minor allele in any variant
Popular Question 6 months ago, created a question with more than 1,000 views. For Unbelievably rapid NGS analysis by Churchill
Commentator 7 months ago, created a comment with at least 3 up-votes. For C: Next Generation Sequencing
Commentator 7 months ago, created a comment with at least 3 up-votes. For C: I'm in a Masters of Bioinformatics Program and wanted to ask everyone for advice
Appreciated 8 months ago, created a post with more than 5 votes. For [Feature-Request] Move as comment/reply to specific post

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