Moderator: Ram

gravatar for Ram
Ram11k
Reputation:
10,950
Status:
Trusted
Location:
New York
Twitter:
@_RamRS
Scholar ID:
Google Scholar Page
Last seen:
an hour ago
Joined:
3 years, 8 months ago
Email:
r****@nyu.edu

Bioinformatician turned Microsoft technologies developer turned bioinformatician. I love messing with text. UNIX/Perl/Python/R programmer, Excel pro, master Googler, database expert. 

I'm an amateur biologist interested in translational human genetics and healthcare.

Twitter: @_ramrs

Posts by Ram

<prev • 2,335 results • page 1 of 234 • next >
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Comment: C: converting mutual information matrix to gene regulatory network
... This is not an answer - you're asking for clarification. Please do not add answers unless you're actually answering the question. I'm moving this to a comment this time, please be more careful the next time. ...
written 5 hours ago by Ram11k
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Comment: C: Extract vcf from 1000 genomes based on population and region
... Do not add answers unless you're answering the question. This deserves to be a comment reply on an appropriate post. I'm moving it to a comment on the top level post now. ...
written 1 day ago by Ram11k
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Comment: C: Is BLAST using Needleman-Wunsch or Smith-Waterman when aliging in between HSSPs?
... That seems a little broad/inaccurate. Would you happen to have a link to any documentation that suggests BLAST uses an algorithm as simple as SW? ...
written 3 days ago by Ram11k
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Comment: C: bam to fasta error using samtools
... Yes, I was. Thank you! ...
written 5 days ago by Ram11k
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Comment: C: Management software for my samples?
... FileMaker is pretty straightforward. It's a tiny bit expensive though - ~$500 You can do simple as well as sophisticated databases on FileMaker Pro. As a database expert, it's a piece of software that has both frustrated and awed me. That said, it is super friendly to the end user and exposes a lot ...
written 5 days ago by Ram11k
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Comment: C: an urgent problrm
... Hello Alex! We believe that this post does not fit the main topic of this site. Not bioinformatics. Also, title and content need more etiquette. For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with. If you disagree ...
written 5 days ago by Ram11k
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Comment: C: The bcftools/htslib VCF commands_Download and installation
... Works fine for me. Do you use a proxy server to connect to the Internet? ...
written 5 days ago by Ram11k
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Comment: C: bam to fasta error using samtools
... Sorry to drift a little off topic, but I have a few pointed questions on the FASTQ to BAM alignment process. Would it be ok if I emailed you my questions? ...
written 5 days ago by Ram11k
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Comment: C: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
... Let's discuss this on Twitter soon - I'm on vacation now. I think the author cannot recommend their own tool, so we can check out the procedure later. ...
written 5 days ago by Ram11k
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Answer: A: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
... This will be super useful. What would it take to push it to homebrew? ...
written 5 days ago by Ram11k

Latest awards to Ram

Appreciated 12 days ago, created a post with more than 5 votes. For Meta: Markdown in Biostars (now enabled)
Good Answer 15 days ago, created an answer that was upvoted at least 5 times. For A: bash loop for alignment RNA-seq data
Commentator 4 weeks ago, created a comment with at least 3 up-votes. For C: Cuffdiff input error
Scholar 7 weeks ago, created an answer that has been accepted. For A: Problem using a custom blast database in tblastx
Appreciated 8 weeks ago, created a post with more than 5 votes. For Meta: Markdown in Biostars (now enabled)
Teacher 9 weeks ago, created an answer with at least 3 up-votes. For A: Problem using a custom blast database in tblastx
Popular Question 10 weeks ago, created a question with more than 1,000 views. For Duplicate @Sq Lines In Sam File Header
Scholar 10 weeks ago, created an answer that has been accepted. For A: Problem using a custom blast database in tblastx
Teacher 10 weeks ago, created an answer with at least 3 up-votes. For A: Problem using a custom blast database in tblastx
Popular Question 10 weeks ago, created a question with more than 1,000 views. For Duplicate @Sq Lines In Sam File Header
Popular Question 11 weeks ago, created a question with more than 1,000 views. For Duplicate @Sq Lines In Sam File Header
Commentator 3 months ago, created a comment with at least 3 up-votes. For C: Cuffdiff input error
Commentator 3 months ago, created a comment with at least 3 up-votes. For C: Cuffdiff input error
Commentator 3 months ago, created a comment with at least 3 up-votes. For C: Cuffdiff input error
Cylon 4 months ago, received 1,000 up votes.
Scholar 4 months ago, created an answer that has been accepted. For A: How do I ask a question on Biostars?
Commentator 4 months ago, created a comment with at least 3 up-votes. For C: Next Generation Sequencing
Scholar 4 months ago, created an answer that has been accepted. For A: How do I ask a question on Biostars?
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: How do I ask a question on Biostars?
Popular Question 5 months ago, created a question with more than 1,000 views. For Check if REF allele is minor allele in any variant
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: How do I ask a question on Biostars?
Commentator 5 months ago, created a comment with at least 3 up-votes. For C: Next Generation Sequencing
Scholar 6 months ago, created an answer that has been accepted. For A: How do I ask a question on Biostars?
Popular Question 7 months ago, created a question with more than 1,000 views. For Check if REF allele is minor allele in any variant

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