User: Assa Yeroslaviz

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Assa Yeroslaviz1.4k
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Munich
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https://www.biochem.mp...
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AssaYeroslaviz
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9 years, 3 months ago
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I'm a bioinformatician in the bioinformatics group of the Max-Planck Institute for biochemistry in Munich, Germany. In our group we have a broad research focus that is mainly dedicated to help solving biological problems. We achieve this by a very close interaction with researchers in biological research labs, located here at the MPI-B in Munich, as well as in many other research institutions around the globe. Due to these close ties with a biological research environment, we are partly dedicating our efforts to the development of bioinformatics tools and databases that will help advance biological sciences.

Posts by Assa Yeroslaviz

<prev • 461 results • page 1 of 47 • next >
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Comment: C: magicblast aganist local nr database
... But I don't have a FASTA file. I have a BLAST DB, splitted into several files hence the *00*, *01*, etc. nr.00.phd nr.00.phi nr.00.phr nr.00.pin nr.00.pog nr.00.ppd nr.00.ppi nr.00.psq Or do I miss something? ...
written 1 day ago by Assa Yeroslaviz1.4k
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Comment: C: magicblast aganist local nr database
... I know, I wanted to run it against the `nt` database, not `nr`. ...
written 1 day ago by Assa Yeroslaviz1.4k
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Comment: C: magicblast aganist local nr database
... Hello Assa Yeroslaviz! We believe that this post does not fit the main topic of this site. I have downloaded the nr database, which is the non redundant protein database, but I need nt! For this reason we have closed your question. This allows us to keep the site focused on the topics that the c ...
written 1 day ago by Assa Yeroslaviz1.4k
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magicblast aganist local nr database
... I have downloaded the complete nr datadase to my local server. I have now a list of nr.00* to nr.38* nr.00.phd nr.00.phi nr.00.phr nr.00.pin nr.00.pog nr.00.ppd nr.00.ppi nr.00.psq nr.00.tar.gz.md5 nr.01.phd ... nr.38.ppd nr.38.ppi nr.38.psq ...
local nr magicblast blast written 1 day ago by Assa Yeroslaviz1.4k
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Comment: C: increase spacing between groups in a bar plot
... added above, sorry, I forgot. ...
written 9 days ago by Assa Yeroslaviz1.4k
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Comment: C: increase spacing between groups in a bar plot
... I have found it myself, thanks. and this is why I added, that I tried with the dodge option, but it didn't work. ...
written 9 days ago by Assa Yeroslaviz1.4k
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increase spacing between groups in a bar plot
... I put this structure into a bar plot structure(list(mgi_symbol = c("Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc", "Arc"), group = 1:16, mean_count = c(57.8131751359466, 225.701671404033, 50.2793245979203, 28.4576116000487 ...
spacing ggplot2 barplot written 9 days ago by Assa Yeroslaviz1.4k
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Comment: C: How to split a data.frame and calculate a row-wise average
... This is a nice observation. I mean, it doesn't really affect my data, but for bigger data sets, it might be of great value. thanks. ...
written 9 days ago by Assa Yeroslaviz1.4k
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Comment: C: How to split a data.frame and calculate a row-wise average
... thank you very much, it looks very good and straight forward. ...
written 10 days ago by Assa Yeroslaviz1.4k
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Comment: C: How to split a data.frame and calculate a row-wise average
... awesome solution as well, thanks ...
written 10 days ago by Assa Yeroslaviz1.4k

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