User: Shicheng Guo
Shicheng Guo • 5.0k
- Reputation:
- 5,000
- Status:
- Trusted
- Location:
- Last seen:
- 12 hours ago
- Joined:
- 3 years ago
- Email:
- s***********@hotmail.com
Posts by Shicheng Guo
<prev
• 403 results •
page 1 of 41 •
next >
0
votes
2
answers
541
views
2
answers
Answer:
A: Ancestry Informative Markers
... Ancestry Informative Markers
African American vs European Ancestry
We selected a grid of 3,388 markers (distributed approximately one per megabase, across the autosomes and the X chromosome) that showed strong differentiation between African- and European-ancestry samples sequenced by the 1000 Geno ...
written 1 day ago by
Shicheng Guo • 5.0k
0
votes
1
answer
742
views
1
answers
Comment:
C: Convert multi-allele to bi-allele
... In my opinion, we can separate these multi-allelic variants and do the association separately with specific statistic method. ...
written 1 day ago by
Shicheng Guo • 5.0k
0
votes
3
answers
2.8k
views
3
answers
... Here, you might be have a bug. When there is duplicated SNP with same ID, --exclude will remove all the SNPs simultaneously. If you want to --exclude, be sure to change the ID name to different one advanced. ...
written 2 days ago by
Shicheng Guo • 5.0k
1
vote
0
answers
76
views
0
answers
... Hi All,
I want to do some further analysis based on IHEC methylation data. However, after I download the metadata, I don’t know how to read it. How to turn metadata to structured excel or tab separated tables?
The metadata link: http://epigenomesportal.ca/cgi-bin/api/getDataHub.py?session=8298
...
written 7 days ago by
Shicheng Guo • 5.0k
1
vote
2
answers
1.1k
views
2
answers
Comment:
C: CpG-SNPs for newbies
... check the nucleotide after SNPs with 'C' and the nucleotide before SNPs with 'G', then you can identify all these CpG-SNPs. Later I will do the genome-wide analysis and provide a full list of CpG-SNP ...
written 25 days ago by
Shicheng Guo • 5.0k
1
vote
1
answer
915
views
1
answers
Answer:
A: Haplogroup Prediction
... Please check this database to find your answer:
https://isogg.org/tree/ ...
written 4 weeks ago by
Shicheng Guo • 5.0k
1
vote
1
answer
154
views
1
answers
... Done. Find the hash key:
https://genome.cshlp.org/content/12/2/339/suppl/DC1
and the project main page:
https://isogg.org/tree/ ...
written 4 weeks ago by
Shicheng Guo • 5.0k
1
vote
0
answers
151
views
0
answers
... It is caused by the allele is from different strand. GG actually == CC they are from Watson and Crick strand, respectively.
Now you know the above situation, the follow situation should also be paid attention:
When merging two datasets, it is clearly very important that the two sets of SNPs are ...
written 12 weeks ago by
Shicheng Guo • 5.0k
1
vote
0
answers
308
views
0
answers
... Hi Kevin, How to understand the observed P-value in left figure is lower than the expectation regions? and sometimes, the observed P-values in higher than expected regions (null hypothesis). Which factors will caused the observed P-value higher or lower than the expected regions (grey region in the ...
written 12 weeks ago by
Shicheng Guo • 5.0k
0
votes
0
answers
419
views
0
answers
... Sorry. Format to insert the link, please download the data and related files from the following link:
https://pan.baidu.com/s/1ElJ-heuW9jZXDeU9R-dZqg
...
written 3 months ago by
Shicheng Guo • 5.0k
Latest awards to Shicheng Guo
Great Question
4 weeks ago,
created a question with more than 5,000 views.
For fastq-dump split-spot and skip-technical
Popular Question
4 weeks ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Popular Question
4 weeks ago,
created a question with more than 1,000 views.
For Bad Exprience on bigwig Format Visualization in UCSC
Popular Question
7 weeks ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Popular Question
7 weeks ago,
created a question with more than 1,000 views.
For Bad Exprience on bigwig Format Visualization in UCSC
Popular Question
8 weeks ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Popular Question
10 weeks ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Student
12 weeks ago,
asked a question with at least 3 up-votes.
For Public data access: Single-cell RNA-seq and Buck RNA-seq data
Popular Question
3 months ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Prophet
3 months ago,
created a post with more than 20 followers.
For Good Habit for Bioinformatics Analyst or Scientist
Commentator
3 months ago,
created a comment with at least 3 up-votes.
For C: Fastqc to BS-seq dataset (Methylation-seq quality control)
Popular Question
3 months ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Popular Question
3 months ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Epic Question
4 months ago,
created a question with more than 10,000 views.
For Protocol To Downlad TCGA Data From GDC
Popular Question
4 months ago,
created a question with more than 1,000 views.
For Vector NTI in Window 10
Popular Question
4 months ago,
created a question with more than 1,000 views.
For How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
Popular Question
4 months ago,
created a question with more than 1,000 views.
For How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
Popular Question
4 months ago,
created a question with more than 1,000 views.
For How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
Popular Question
5 months ago,
created a question with more than 1,000 views.
For How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
Popular Question
5 months ago,
created a question with more than 1,000 views.
For How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
Popular Question
5 months ago,
created a question with more than 1,000 views.
For How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
Popular Question
6 months ago,
created a question with more than 1,000 views.
For How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1942 users visited in the last hour