User: Shicheng Guo

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Shicheng Guo4.5k
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Posts by Shicheng Guo

<prev • 343 results • page 1 of 35 • next >
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CoreExome-24 vs Infinium ImmunoArray-24
... Which platform is more popular and suppose you have certain mount money, which platform you will choose for your auto-immune diseases? Thanks. ...
platform selection written 7 days ago by Shicheng Guo4.5k
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Parente2 vs IBD-Groupon vs MCMC_IBDfinder: identity by descent (IBD) inference
... Hey my colleagues, Which algorithms is the best method to be applied for IBD regions (identity by descent) inference? SpeeDB Parente2 IBD-Groupon MCMC_IBDfinder BEAGLE's fastIBD PLINK SNPRelate GERMLINE BEAGLE (fastIBD) HaploShare HapFABIA GraphIBD EMI Efficient Multiple-IBD DASH ...
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EIGENSTRAT vs MDSOutlier: Genetic Background Outlier Detection
... List for Genetic Background Outlier Remove Programme Anyone compared these two tools before? EIGENSTRAT vs mdsoutlier Which one is better? What's the difference between the results? First: EIGENSTRAT [https://github.com/Shicheng-Guo/EIG/tree/master/EIGENSTRAT][1] Second: mdsoutlier [https:// ...
background outlier written 8 days ago by Shicheng Guo4.5k
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Comment: C: IBD vs IBS
... Quite clear answer! might be clear. ...
written 12 weeks ago by Shicheng Guo4.5k
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Forum: Genetic linkage analysis software tools and comparison
... Here, we hope to talk about the comparison between different genetic linkage analysis software tools. Several years ago, I used ***Merlin*** to do linkage analysis to a NGS genome-wide SNP dataset (family data). Now, I tried to apply some other genetic linkage analysis software tools and hope to kno ...
forum linkage analysis genetic written 3 months ago by Shicheng Guo4.5k
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Tool: Multiplex PCR Primer Design Tools
... This page were applied to list all the computational tools for multiplex PCR primer design for Oligo Design for Multiplex PCR & High Throughput SNP/RNA/BSP and Analysis. 1, http://www.premierbiosoft.com/primerplex/index.html 2, https://omictools.com/msre-htprimer-tool 3, https://omictools.co ...
tools multiplex pcr tool written 3 months ago by Shicheng Guo4.5k • updated 3 months ago by genomax37k
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Comment: C: TF motif binding region searching script in human genome
... Yes. It is exactly what I need. Thanks. ...
written 5 months ago by Shicheng Guo4.5k
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TF motif binding region searching script in human genome
... Hi All, I have one interest TF and its motif sequence is known (both logo and frequency matrix) and I want to identify all the related genomic regions. Is there any Perl, R or Python script to share? You can find that the perl script works perfect. therefore, I suggest you to use perl script. b ...
motif logo written 5 months ago by Shicheng Guo4.5k
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Comment: C: Phred score check for BAM files
... I hope to achieve the phred score from bam files which download from public database with this script. ...
written 5 months ago by Shicheng Guo4.5k
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Comment: C: How to provide re-analysis link to previous dataset in GEO page
... GEO (least 20 characters) ...
written 6 months ago by Shicheng Guo4.5k

Latest awards to Shicheng Guo

Popular Question 7 days ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
Popular Question 12 weeks ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
Good Answer 12 weeks ago, created an answer that was upvoted at least 5 times. For A: What is a typical workflow to correlate methylation and expression data?
Teacher 12 weeks ago, created an answer with at least 3 up-votes. For A: error in running R
Librarian 4 months ago, created a post with more than 10 bookmarks. For Good Habit for Bioinformatics Analyst or Scientist
Popular Question 4 months ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
Popular Question 4 months ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
Popular Question 5 months ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
Student 5 months ago, asked a question with at least 3 up-votes. For Converting Phred64 fastq to Phred33 fastq
Popular Question 5 months ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
Student 5 months ago, asked a question with at least 3 up-votes. For Converting Phred64 fastq to Phred33 fastq
Good Answer 5 months ago, created an answer that was upvoted at least 5 times. For A: What is a typical workflow to correlate methylation and expression data?
Appreciated 5 months ago, created a post with more than 5 votes. For A: What is a typical workflow to correlate methylation and expression data?
Popular Question 5 months ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
Popular Question 6 months ago, created a question with more than 1,000 views. For Relationship table between SRX and SRR in SRA database
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Gold Standard 9 months ago, created a post with more than 25 bookmarks. For Good Habit for Bioinformatics Analyst or Scientist
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Popular Question 9 months ago, created a question with more than 1,000 views. For fastq-dump split-spot and skip-technical
Popular Question 11 months ago, created a question with more than 1,000 views. For fastq-dump split-spot and skip-technical
Teacher 11 months ago, created an answer with at least 3 up-votes. For A: error in running R

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