User: Shicheng Guo

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Shicheng Guo4.6k
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Posts by Shicheng Guo

<prev • 364 results • page 1 of 37 • next >
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Evolution tree with legend figures
... Any Phylogenies tools could provide Phylogeny tree and legend photo together as the following: ![enter image description here][1] [1]: https://lh3.googleusercontent.com/-D1m6ZOLMfPY/WoO6s5YGnTI/AAAAAAAAPok/XDI0bLI3HOchCD9IEU-anKNP_IvHj1KIgCJoC/w530-h656-n-rw/WeChat%2BImage_20180213222653.png ...
evolution written 5 days ago by Shicheng Guo4.6k • updated 5 days ago by Kevin Blighe12k
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(Closed) Evolution tree with legend figures
... Any Phylogenies tools could provide Phylogeny tree and legend photo together as the following: ![enter image description here][1] [1]: https://lh3.googleusercontent.com/-D1m6ZOLMfPY/WoO6s5YGnTI/AAAAAAAAPok/XDI0bLI3HOchCD9IEU-anKNP_IvHj1KIgCJoC/w530-h656-n-rw/WeChat%2BImage_20180213222653.png ...
evolution written 5 days ago by Shicheng Guo4.6k
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Answer: A: Using expression array data to predict ethnicty
... Method is not the key problem. The main problem is that it is hard to find the data to train the model. Another problem is I am thinking it will be quite hard to distinguish ethnicity with expression array data. ...
written 5 days ago by Shicheng Guo4.6k
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ENCODE Chip-seq Data Format
... Take GSE105312 as example, anyone knows how to creat these two files? what's the different between them? I know they are from ENCODE Chip-seq assay. Thanks. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105312 GSE105312_ENCFF580LHX_optimal_idr_thresholded_peaks_hg19.bed.gz GSE105312_ ...
encode chip-seq written 7 days ago by Shicheng Guo4.6k
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Comment: C: Simulation to analysis nonsynonymous SNV effect to FGF6
... RasMol vs JMOL vs Cn3D For more advanced uses, such as command line control, you can install RasMol. Some scientific websites are using JMOL, a Java-based viewer, for rendering molecules in 3-D. JMOL and similar tools may replace Chime eventually, but for now, Chime is the program used most for v ...
written 7 days ago by Shicheng Guo4.6k
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Comment: C: Simulation to analysis nonsynonymous SNV effect to FGF6
... Thanks Kevin, I checked the simulated structure with Cn3D. Jmol is better than Cn3D? ...
written 7 days ago by Shicheng Guo4.6k
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Comment: C: Simulation to analysis nonsynonymous SNV effect to FGF6
... Get the simulated protein structure, however, totally don't know what's the difference. What the hell it is... ...
written 9 days ago by Shicheng Guo4.6k
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Comment: C: Gene expression units explained: RPM, RPKM, FPKM and TPM
... I read the paper carefully and definitely sure that the current post is wrong. You can read again, Wagner GP, Kin K, Lynch VJ. Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples. Theory in biosciences. 2012 Dec 1;131(4):281-5. ...
written 9 days ago by Shicheng Guo4.6k
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Comment: C: Simulation to analysis nonsynonymous SNV effect to FGF6
... Awesome!! Thanks Kevin. https://www.proteinmodelportal.org/?pid=modelling_interactive This is working!! ...
written 9 days ago by Shicheng Guo4.6k
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InfiniumCoreExome-24 vs Infinium ImmunoArray-24
... Anyone can tell how to select the following array? Which one is best to choose for genotyping? > Infinium Global Screening Array-24 Kit > > Infinium ImmunoArray-24 v2 BeadChip Kit > > InfiniumCoreExome-24v1-2_A1.annotated.txt > > Illumina HumanExome BeadChips > > In ...
infinium immunoarray-24 written 9 days ago by Shicheng Guo4.6k • updated 3 days ago by Biostar ♦♦ 20

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