User: David Langenberger

- PhD in Bioinformatics with focus on small non-coding RNAs and high-throughput sequencing
- 10 years of programming experience (Perl, C, R)
- Experience in statistical and automated analysis of big datasets
- strong scientific publication record

Specialties: next-generation sequencing, transcriptomics, small non-coding RNAs, training, consulting, networking

Posts by David Langenberger

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Comment: C: Bringing the power of Big Data to biomedical researchers

... Actually, I directly up-voted the link today, since my company is part of the article and I recognized the title when it popped up in front of me. I have one question: Since you directly closed the first post, can Paul see your comment and/or respond to it? ...

written 12 days ago by David Langenberger ♦ 7.9k

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Comment: C: RNA-Seq Data Analysis Workshop in Leipzig, Germany (09 - 12 October 2017)

... Hi Paul, unfortunately, we won't have time to work on other data than the ones we use during the course. But feel free to bring your questions and ask them. :) ...

written 6 weeks ago by David Langenberger ♦ 7.9k

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8 follow

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News: RNA-Seq Data Analysis Workshop in Leipzig, Germany (09 - 12 October 2017)

... RNA-Seq Data Analysis Workshop ============================== Quality Control, Read Mapping, Visualization and Downstream Analyses -------------------------------------------------------------------- ![enter image description here][1] Advance your research. Understand RNA-Seq analyses challenges ...

ngs news workshop rna-seq written 6 weeks ago by David Langenberger ♦ 7.9k • updated 6 weeks ago by Paul.Newport • 0

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Answer: A: 1st Berlin Summer School in NGS Data Analysis (full)

... **RNA-Seq Data Analysis Workshop (09 - 12 October 2017 in Leipzig, Germany)** Due to high demand for our '1st Berlin Summer School', we will organize another NGS workshop at 9-12 October 2017. It is the same workshop as the summer school, only without the Variant Calling module and the scientific t ...

written 6 weeks ago by David Langenberger ♦ 7.9k

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News: Metagenomics Workshop in October 2017 in Frankfurt, Germany

... Metagenomics Analysis with MEGAN6 ================================= Learn how to use the most powerful interactive microbiome analysis tool ----------------------------------------------------------------------- ![enter image description here][1] **When?** 17 - 19 October 2017 **Where?** Frankfu ...

metagenomics ngs news workshop written 8 weeks ago by David Langenberger ♦ 7.9k

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Answer: A: LAST CALL: Next-Generation Sequencing Data Analysis: A Practical Introduction (F

... Since 2 participants jumped off, there are again 2 seats available. ...

written 9 weeks ago by David Langenberger ♦ 7.9k

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Comment: C: Physalia-Course: Introduction to Linux and workflows for biologists-2 spots left

... I think it is okay to update the number every now and then... but what can I say... I do it myself for our courses. :D Nevertheless, I try to avoid it since I got warned by the admins... which I think is ok. Biostars is not for promotion, but to help others with problems. ...

written 9 weeks ago by David Langenberger ♦ 7.9k

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Answer: A: RNA-Seq Data Analysis Workshop in Berlin, Germany (full)

... Thanks to all participants for this nice event in March in Berlin. ![enter image description here][1] [1]: http://www.ecseq.com/blog/2017/img/Berlin-03-2017.jpg ...

written 3 months ago by David Langenberger ♦ 7.9k

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Blog: Some regions of the genome are not covered by DNA-Seq

... **Are there regions in the genome that are not covered by DNA sequencing?** If the genome would be a landscape, and you would create a map of that landscape by NGS, the map would certainly have some white areas. In other words: some genomic regions cannot be covered very well by sequencing the DNA ...

ngs dna-seq blog bias written 3 months ago by David Langenberger ♦ 7.9k

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Comment: A: DNA fragmentation is biased

... Crosspost on [SEQanswers][1] [1]: http://seqanswers.com/forums/showthread.php?t=75567 ...

written 3 months ago by David Langenberger ♦ 7.9k

Latest awards to David Langenberger

Popular Question 4 weeks ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology

Appreciated 6 weeks ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File

Good Answer 6 weeks ago, created an answer that was upvoted at least 5 times. For A: Renaming Entries In A Fasta File

Appreciated 6 weeks ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File

Commentator 8 weeks ago, created a comment with at least 3 up-votes. For C: Repetitive Regions In Hg18

Scholar 8 weeks ago, created an answer that has been accepted. For A: NGS pipeline analyses

Appreciated 11 weeks ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File

Popular Question 3 months ago, created a question with more than 1,000 views. For Hands-On Training in RNA-seq Bioinformatics: A Practical Introduction - Mapping, Visualization, Basic Analyses

Appreciated 4 months ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File

Appreciated 4 months ago, created a post with more than 5 votes. For C: Prague Summer School - Next-Gen Seq Data Analysis

Appreciated 4 months ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File

Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Bed File Of Reads To Wiggle File Of Numbers Of Features At Each Position

Appreciated 4 months ago, created a post with more than 5 votes. For A: Best bioinfo one-liners?

Good Answer 4 months ago, created an answer that was upvoted at least 5 times. For A: miRNA mapping rate is very low.. (less than 0.03%)

Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Repetitive Regions In Hg18

Good Answer 4 months ago, created an answer that was upvoted at least 5 times. For A: Renaming Entries In A Fasta File

Popular Question 5 months ago, created a question with more than 1,000 views. For Hands-On Training in RNA-seq Bioinformatics: A Practical Introduction - Mapping, Visualization, Basic Analyses

Appreciated 5 months ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File

Commentator 5 months ago, created a comment with at least 3 up-votes. For C: Repetitive Regions In Hg18

Commentator 5 months ago, created a comment with at least 3 up-votes. For C: Converting Sam Files To Bam Files - Reproduce Results Nature Paper: Transcriptom

Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Bed File Of Reads To Wiggle File Of Numbers Of Features At Each Position

Great Question 6 months ago, created a question with more than 5,000 views. For Attention: Bowtie2 And Multiple Hits

Appreciated 6 months ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File

Commentator 7 months ago, created a comment with at least 3 up-votes. For C: Repetitive Regions In Hg18

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