Moderator: David Langenberger

Reputation:
9,020
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Trusted
Location:
Deutschland
Website:
http://www.ecseq.com/
Twitter:
ecSeq
Scholar ID:
Google Scholar Page
Last seen:
12 hours ago
Joined:
7 years, 5 months ago
Email:
d*****************@ecseq.com

Bioinformatician with focus on computational and statistical analysis of sequencing data.

- PhD in Bioinformatics with focus on small non-coding RNAs and high-throughput sequencing 
- 10 years of programming experience (Perl, C, R)
- Experience in statistical and automated analysis of big datasets
- strong scientific publication record

Specialties: next-generation sequencing, transcriptomics, small non-coding RNAs, training, consulting, networking


Posts by David Langenberger

<prev • 504 results • page 1 of 51 • next >
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Comment: C: To Cloud or Not to Cloud - Privacy implications of genetic data sharing
... The intention was to discuss it. That’s why I chose the title: To the Cloud or Not to the Cloud Do you have experiences/feelings here? In a lot of research projects, the anonymisation is done by just hiding the names. That seems not to be enough. ...
written 9 days ago by David Langenberger9.0k
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Forum: To Cloud or Not to Cloud - Privacy implications of genetic data sharing
... [To Cloud or Not to Cloud - Privacy implications of genetic data sharing][1] -------------------------------------------- Data is the new oil has been the slogan of recent years, explaining the tremendous rise in power and the data hunger of tech companies such as Facebook. Emails, contacts, social ...
forum dna-seq security diagnostics written 9 days ago by David Langenberger9.0k
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News: Hands-On RNA-Seq Data Analysis Workshop
... RNA-Seq Data Analysis Workshop ------------------------------ Quality Control, Read Mapping, Visualization and Downstream Analyses **In a nutshell** - **Learn** the essential computing skills for NGS bioinformatics - **Understand** NGS analysis algorithms (e.g. read alignment) and data forma ...
news data analysis rna-seq workshop written 15 days ago by David Langenberger9.0k
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Forum: How can unique molecular identifiers (UMIs) help to reduce quantitative biases?
... Maybe you have already heard about UMIs and how they can help to reduce errors and quantitative biases in your Next-Generation Sequencing (NGS) experiment. But do you know how they work and how you should handle them bioinformatically after sequencing? Here we will shortly introduce these newly deve ...
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Answer: A: Problem with QiaSeq panel
... Hi Peter, our genetic testing software 'Seamless NGS' offers an easy-to-use workflow for the analysis of Qiagen's QiaSeq panels. Before mapping the reads, the common sequence and the UMIs are clipped away. After mapping, the UMIs sequences are properly used to correct for PCR clones and the singl ...
written 9 weeks ago by David Langenberger9.0k
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Comment: C: I ask Question and post is deleted?
... @genomax Thanks! I saw it in the post and already answered it. @Peter If you just reply, the post should not be moved to the first page. Only if you add an answer. Perhaps somebody saw you adding your reply as an answer and changed it. That might be the explanation why it disappeared. ...
written 9 weeks ago by David Langenberger9.0k
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Comment: C: 3rd Berlin Summer School in NGS Data Analysis (only 2 seats left)
... Dear Peter, we will show how UMIs work. Regarding the tools: Try e.g. UMI-tools. ...
written 9 weeks ago by David Langenberger9.0k
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Comment: C: 3rd Berlin Summer School in NGS Data Analysis (only 3 seats left)
... Hey Morris_Chair, thanks for your input. The course (of course) includes an introduction to Linux where we explain how to use it. 80% of our participants never worked with Linux before! Of course, they are no Linux experts in the end, but they know the basics, like how to change/create/delete/move ...
written 3 months ago by David Langenberger9.0k
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News: Meet Dr. Giovanni Marco Dall'Olio
... ![enter image description here][1] Dr. Giovanni Marco Dall'Olio is a bionformatics investigator at Glaxo Smith Kline (GSK) in Stevenage, UK. Giovanni studied biotechnology and bioinformatics in Bolognia, Italy. His PhD was focused on human population genetics, in the Evolutionary Biology group at ...
ngs news training rna-seq written 3 months ago by David Langenberger9.0k
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Blog: NGS-based research, empowering medical professionals through user-friendly software
... **NGS-based research, empowering medical professionals through user-friendly software, and achieving work-life balance** *Interview by Claudia S. Copeland, PhD; Conversations with Bioinnovators series* Read the full interview [here][1] ![enter image description here][2] [1]: https://www.link ...
illumina ngs dna-seq blog diagnostics written 4 months ago by David Langenberger9.0k

Latest awards to David Langenberger

Great Question 1 day ago, created a question with more than 5,000 views. For Upcoming NGS Workshop: A Beginner's Guide to NGS Data Analysis
Commentator 6 days ago, created a comment with at least 3 up-votes. For C: Repetitive Regions In Hg18
Appreciated 15 days ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File
Popular Question 4 weeks ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Popular Question 3 months ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Popular Question 3 months ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Epic Question 4 months ago, created a question with more than 10,000 views. For Attention: Bowtie2 And Multiple Hits
Popular Question 4 months ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Commentator 5 months ago, created a comment with at least 3 up-votes. For C: Benchmark - Comparison of Different NGS Mappers
Commentator 5 months ago, created a comment with at least 3 up-votes. For C: Converting Sam Files To Bam Files - Reproduce Results Nature Paper: Transcriptom
Commentator 5 months ago, created a comment with at least 3 up-votes. For C: Repetitive Regions In Hg18
Appreciated 5 months ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File
Popular Question 7 months ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Scholar 7 months ago, created an answer that has been accepted. For A: NGS pipeline analyses
Appreciated 7 months ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File
Commentator 7 months ago, created a comment with at least 3 up-votes. For C: Repetitive Regions In Hg18
Good Answer 8 months ago, created an answer that was upvoted at least 5 times. For A: Renaming Entries In A Fasta File
Appreciated 8 months ago, created a post with more than 5 votes. For A: Renaming Entries In A Fasta File
Teacher 8 months ago, created an answer with at least 3 up-votes. For A: Bed File Of Reads To Wiggle File Of Numbers Of Features At Each Position
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: Bed File Of Reads To Wiggle File Of Numbers Of Features At Each Position
Popular Question 10 months ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Good Answer 10 months ago, created an answer that was upvoted at least 5 times. For A: Renaming Entries In A Fasta File
Popular Question 11 months ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Popular Question 11 months ago, created a question with more than 1,000 views. For Postdoc in bioinformatics – Department of Molecular Oncology
Good Answer 11 months ago, created an answer that was upvoted at least 5 times. For A: Renaming Entries In A Fasta File

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