Entering edit mode
9.5 years ago
tito3000
•
0
Hi all I'm trying to launch RetroSeq (using ubuntu os).
When I run the command line:
perl retroseq.pl -discover -eref ereff.tab -bam file_sorted.bam -output mysample.candidates.tab
I obtain this msg:
> RetroSeq: A tool for discovery and genotyping of transposable elements
> from short read alignments Version: 1.41 Author: Thomas Keane
> (thomas.keane@sanger.ac.uk)
>
> Reading -eref file: ereff.tab at retroseq.pl line 158.rence file: rider.fasta
Can you help me please?
