SCOP domain classification - numbers identificantion
1
0
Entering edit mode
5.6 years ago
fyfes ▴ 70

Hi, where can I find corresponding names to SCOP domain classification abbreviations? SCOPCLA - SCOP domain classification. The abbreviations denote:

TP=protein type, CL=protein class, CF=fold, SF=superfamily, FA=family

What is for example TP=1, or FA=4003653?

SCOP protein • 1.2k views
ADD COMMENT
1
Entering edit mode
5.6 years ago
Mensur Dlakic ★ 30k

Parseable SCOPe files are here, and you want the one that starts with dir.cla. That particular family number doesn't exist, so maybe you want the old SCOP files.

ADD COMMENT

Login before adding your answer.

Traffic: 4342 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6