10X single-cell Seuart object

Question

[fuhaolll2]

For example, I have a Seuart object GSM7, After analyse , cells in GSM7 are divided into different cell cluster. Then annotation these cell cluster ,get some cell types i want to get a new Seuart object GSM_7_B that its cells type all =="B cells"

thanks for guidance

Answer 1

[igor]

If you want to extract the cells of a specific cluster, you can use subset(). The Interaction Tips vignette has a few examples such as:

subset(pbmc, idents = c("NK", "B"))

[fuhaolll2]

tanks for your answer!