Tools to infer phylogenetic tree from continuous character sequences

Question

[Fynn]

Hey all,

I am trying to generate a phylogenetic tree from sequences containing continuous characters. Specifically, I have about 5 samples and for each sample a sequence of continuous copy number values. From that, I would like to infer a tree topology that relates the samples to each other in terms of occurrence of copy number changes.

Are there any tools or R packages that are suitable for this task?