Cytoscape : problem importing networks from String databases
1
0
Entering edit mode
2.2 years ago
Jennifer • 0

Hello, I've just recently encountered a problem importing networks from the String database. Specifically, after entering "File" - "Import" - "Network from public databases", the "Import Network from Public Databases" window opens, but the only option in the "Data source" box is "Universal Interaction Database Client". THe String queries appear to be missing. I am using Cytoscape version 3.9.1. Anyone have any idea what I have done wrong? Many thanks! Jennifer

String database Cytoscape • 819 views
ADD COMMENT
0
Entering edit mode

I don't think it is necessarily anything you did wrong. I see the same thing as you and STRING seems not to be available. I am guessing it is either a connectivity issue, or something else wrong at the remote database level.

ADD REPLY
0
Entering edit mode

Thank you very much for your reply ... very reassuring! Shall wait and try again. All the best

ADD REPLY
0
Entering edit mode

Hello The problem is persisting ... would seem not to be a problem with the database. Anyone have any ideas? Many thanks! Jennifer

ADD REPLY
0
Entering edit mode
2.2 years ago
scooter ▴ 620

Hi Jennifer,

I'm not having any problems importing data using the stringApp. What version of the app do you have installed?

-- scooter

ADD COMMENT

Login before adding your answer.

Traffic: 2070 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6