Predicting celltype from only single cell ATAC Seq analysis
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2.1 years ago

I am analyzing single-cell multi-omics ATAC seq data and I do not have sc RNA seq data. Is it possible to predict cell type from only sc ATAC seq data in SEURAT?

Single-Cell ATAC-Seq Seurat Multiomics • 535 views
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I think theoretically it should be possible. Have you tried to look at the accessibility of the promotor regions near the marker genes?

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