Plot Phylogenetic tree with traits in Biopython
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2.9 years ago

I am using the package Phylo from Biopython to draw phylogenetic trees.

I would like to draw traits linked to the Species names, as shown in this article figure. https://www.researchgate.net/figure/Phylogenetic-tree-along-with-summary-information-of-fine-root-trait-variation-among-20_fig1_342883672

enter image description here

I know it is possible to do it with R, but cannot find any mention of this feature in the Biopython documentation. Would anyone know if this is possible to plot with Phylo, or another Python software?

Biopython Phylo Python Phylogeny • 652 views
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