how to decide the strandness of the RNAseq data
1
0
Entering edit mode
18 months ago
dew ▴ 10
https://rseqc.sourceforge.net/#infer-experiment-py

Does the result Fraction of reads explained by "1+-,1-+,2++,2--": 0.9441 means --rf-stranded ?

Thanks a lot!

strandness RNA-Seq • 515 views
ADD COMMENT
1
Entering edit mode
18 months ago
iraun 6.2k

yes, reverse strand specific.

ADD COMMENT
0
Entering edit mode

Thanks a lot!

ADD REPLY

Login before adding your answer.

Traffic: 2643 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6