Visualizing Chip Peak files from ENCODE
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16 months ago
Morgan • 0

Hello. I am trying to view chip peak files in the WashU genome browser from Encode. Specifically I am needing to visualize the peak files for the following: ENCFF017XLW, ENCFF188SZS, and ENCFF367KIF

These files are in BED format and I have found a bigbed file for each but cannot view it without a tabix file. Where can I get a bigwig file for these to view the plots in the WashU genome browser?

I am sorry if this is a silly question.

HiChIP fitHiChIP ENCODE Chipseq • 705 views
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16 months ago
xubeisi ▴ 30

If you just need see them one by one, it is easier to directly view the tracks at encode such as https://www.encodeproject.org/experiments/ENCSR000AKB/

you could download the bigwig as well at the above page. There is a "file details" tab below.

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Thank you! This was very helpful

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