software and publicly available datasets for eQTLs?
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2.6 years ago
User 7754 ▴ 290

Hi,

What is the preferred software these days for running eQTL analyses, and the largest publicly available datasets?

My impressions are: softwares: matrixEQTL is fast, but I think limited by the linear modeling mixed models could be better.

datasets eQTLGen is the largest dataset publicly available. eQTL Catalogue is also a compendium of datasets.

I was curious what others thought.

Cheers, Fra

eqtls • 677 views
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