Positive and negative value fold value in ATAC seq using DiffBind

Question

[Chris]

Hi all,

Does positive fold in this case mean the gene in diseased group is more accessible than the control group? The object is created from the DiffBind package. Thank you so much!

I think the answer is yes.

Answer 1

[Rory Stark]

This is a duplicate of an issue discussed on the Bioconductor Support forum: https://support.bioconductor.org/p/9150923/#9150961