GMT file from eggnog annotation

Question

[jorge.cortes.miranda]

I've been working with de novo assembled trancriptome of a non-model species and recently I performed an annotation of it using eggnog mapper. Now I wish to use the R package pathwaysPCA, but the input needed is a GMT file, so I would like to know if there is a way to obtain a GMT file from the eggnog annotation files.

Thanks!

[leandrovb88]

Hi. I am trying to do the same thing. Did you find some way to do it?

Best,